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Report for CCDS56235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56235.1 Public Homo sapiens 22 PPP6R2 24 110 108 CCDS HistoryNCBI Gene:9701Re-query CCDS DB by CCDS ID:56235.1Re-query CCDS DB by GeneID:9701See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56235.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395741.7 ENSP00000379090.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395741.7Link to Ensembl Protein Viewer:ENSP00000379090.3Re-query CCDS DB by Nucleotide ID:ENST00000395741Re-query CCDS DB by Protein ID:ENSP00000379090
Original member Current member NCBI NM_001242899.2 NP_001229828.1 Accepted alive Link to Nucleotide Sequence:NM_001242899.2Link to Protein Sequence:NP_001229828.1Re-query CCDS DB by Nucleotide ID:NM_001242899Re-query CCDS DB by Protein ID:NP_001229828Link to BLAST:NP_001229828.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229828.1 933 O75170-3 933 100% 0 0

Chromosomal Locations for CCDS 56235.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 50393909 50394135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50406689 50406875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50414552 50414689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50416092 50416157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50418867 50418979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50419346 50419462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50422254 50422380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50423462 50423614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50431173 50431382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50432265 50432329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50434966 50435081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50436367 50436452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50437506 50437603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50437843 50437900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50438174 50438298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50438599 50438762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50439701 50439857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50439961 50440049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50440822 50441026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50443866 50444117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50444199 50444247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2802 nt):
ATGTTCTGGAAGTTTGACTTGAACACCACGTCCCATGTTGACAAGCTGCTGGACAAGGAGCATGTGACGC
TGCAGGAGTTAATGGATGAAGATGACATCTTGCAGGAGTGTAAGGCTCAGAACCAGAAGCTGCTGGACTT
CCTGTGCAGGCAGCAGTGCATGGAGGAGCTGGTGAGCCTCATCACACAGGATCCGCCCCTGGACATGGAG
GAGAAGGTCCGCTTCAAATATCCAAACACAGCCTGTGAGCTTCTGACTTGTGATGTGCCGCAGATCAGCG
ACCGCCTCGGTGGGGACGAGAGCCTGCTGAGCCTCCTGTACGACTTCTTGGACCATGAGCCGCCTCTCAA
TCCTCTGCTCGCCAGTTTTTTCAGCAAGACCATTGGCAATCTCATTGCAAGAAAAACCGAACAGGTGATT
ACGTTTTTGAAGAAGAAGGACAAGTTCATCAGCCTGGTGTTGAAGCACATCGGCACCTCAGCGCTTATGG
ACCTGCTGCTGCGCCTGGTCAGCTGTGTGGAGCCAGCCGGGCTCCGGCAGGACGTCCTGCACTGGCTGAA
TGAAGAGAAGGTCATCCAGAGGCTTGTGGAGTTGATCCACCCGAGCCAGGATGAAGATAGGCAGTCAAAT
GCTTCTCAGACTCTCTGTGACATAGTTAGGCTGGGCAGAGACCAGGGCAGTCAGCTGCAAGAGGCTCTGG
AGCCAGACCCGCTCCTCACAGCGCTGGAGTCCAGGCAGGACTGTGTGGAGCAGCTTCTGAAGAACATGTT
TGATGGAGACCGGACGGAGAGCTGCCTCGTCAGTGGGACTCAGGTGTTACTCACCTTGCTGGAAACCAGG
CGGGTTGGGACAGAGGGCTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCATACGCTGTCAGCAGCA
GCGTACTACACGGCATCGAGCCTCGGCTGAAGGACTTCCACCAGCTCCTGCTCAACCCGCCCAAGAAGAA
AGCGATCCTGACCACCATTGGTGTGCTGGAGGAGCCCCTGGGGAATGCCCGTCTGCATGGCGCCCGCCTC
ATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGCCGGCTCAACACGATGGACT
TACTGCTGGACTTGTTCTTTAAGTACACCTGGAATAACTTTTTGCACTTCCAAGTGGAACTATGCATAGC
CGCTATTCTCTCCCACGCTGCCCGTGAGGAGAGGACAGAAGCCAGCGGATCCGAGAGCAGGGTGGAGCCT
CCGCATGAGAACGGGAACCGGAGCCTGGAGACTCCCCAGCCGGCCGCCAGCCTCCCTGACAACACAATGG
TGACCCACCTGTTCCAGAAGTGCTGCCTGGTGCAGAGGATCCTGGAGGCCTGGGAAGCCAACGACCACAC
GCAGGCAGCGGGTGGCATGAGACGTGGGAACATGGGCCACCTCACACGGATCGCCAACGCGGTGGTGCAG
AACCTGGAGCGGGGCCCTGTGCAGACGCACATCAGCGAGGTCATCCGAGGGCTCCCTGCGGACTGCCGTG
GCCGCTGGGAGAGCTTCGTGGAGGAGACGCTGACGGAGACGAACCGCAGGAACACTGTGGACCTGGCCTT
CTCTGACTACCAGATCCAGCAGATGACAGCCAACTTCGTGGATCAGTTTGGCTTCAATGATGAGGAGTTT
GCCGACCAGGACGACAACATCAATGCCCCGTTTGACAGGATCGCAGAGATCAACTTCAACATCGACGCTG
ACGAGGACAGTCCCAGCGCAGCTCTGTTTGAGGCCTGCTGCAGTGACCGCATCCAGCCCTTTGATGATGA
TGAGGACGAGGACATCTGGGAGGACAGTGACACTCGCTGTGCTGCCCGGGTGATGGCCAGACCCAGGTTT
GGAGCCCCCCATGCTTCAGAGAGTTGCTCAAAGAATGGCCCAGAGCGTGGAGGCCAGGATGGGAAGGCGA
GCTTGGAAGCACACAGAGATGCACCTGGGGCAGGTGCCCCACCGGCCCCCGGGAAGAAGGAAGCGCCCCC
TGTGGAGGGTGACTCAGAAGGCGCCATGTGGACGGCAGTGTTTGATGAGCCAGCGAACTCAACGCCCACA
GCCCCAGGAGTGGTGAGGGACGTGGGTTCCAGTGTGTGGGCAGCTGGCACCTCAGCTCCAGAGGAGAAAG
GCTGGGCCAAGTTCACTGACTTCCAACCTTTCTGCTGCTCCGAGTCAGGGCCCAGGTGCAGCTCTCCGGT
GGACACAGAATGCAGCCATGCTGAGGGCAGCCGGAGCCAAGGCCCTGAGAAAGCCTTCAGCCCGGCTTCT
CCATGTGCCTGGAACGTGTGTGTCACCAGGAAGGCCCCCCTGCTGGCCTCTGACAGTAGCTCCTCTGGGG
GCTCCCACAGCGAGGATGGCGACCAGAAGGCAGCGAGTGCCATGGATGCGGTGAGCAGGGGTCCCGGCCG
GGAGGCCCCCCCGCTGCCCACAGTGGCCAGGACAGAGGAGGCTGTCGGCAGGGTCGGGTGTGCTGACAGC
CGGCTGTTAAGCCCTGCCTGCCCCGCGCCAAAGGAAGTGACTGCTGCCCCAGCCGTGGCTGTGCCCCCCG
AGGCTACTGTGGCCATCACCACAGCACTGAGCAAGGCTGGCCCCGCCATACCCACCCCAGCAGTCTCTTC
TGCACTGGCCGTGGCGGTCCCCCTAGGGCCCATCATGGCAGTCACAGCAGCCCCAGCCATGGTGGCCACC
CTGGGGACAGTGACAAAGGACGGGAAGACAGATGCCCCGCCAGAAGGAGCTGCCTTAAATGGCCCAGTGT
GA

Translation (933 aa):
MFWKFDLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVSLITQDPPLDME
EKVRFKYPNTACELLTCDVPQISDRLGGDESLLSLLYDFLDHEPPLNPLLASFFSKTIGNLIARKTEQVI
TFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPAGLRQDVLHWLNEEKVIQRLVELIHPSQDEDRQSN
ASQTLCDIVRLGRDQGSQLQEALEPDPLLTALESRQDCVEQLLKNMFDGDRTESCLVSGTQVLLTLLETR
RVGTEGLVDSFSQGLERSYAVSSSVLHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARL
MAALLHTNTPSINQELCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILSHAAREERTEASGSESRVEP
PHENGNRSLETPQPAASLPDNTMVTHLFQKCCLVQRILEAWEANDHTQAAGGMRRGNMGHLTRIANAVVQ
NLERGPVQTHISEVIRGLPADCRGRWESFVEETLTETNRRNTVDLAFSDYQIQQMTANFVDQFGFNDEEF
ADQDDNINAPFDRIAEINFNIDADEDSPSAALFEACCSDRIQPFDDDEDEDIWEDSDTRCAARVMARPRF
GAPHASESCSKNGPERGGQDGKASLEAHRDAPGAGAPPAPGKKEAPPVEGDSEGAMWTAVFDEPANSTPT
APGVVRDVGSSVWAAGTSAPEEKGWAKFTDFQPFCCSESGPRCSSPVDTECSHAEGSRSQGPEKAFSPAS
PCAWNVCVTRKAPLLASDSSSSGGSHSEDGDQKAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADS
RLLSPACPAPKEVTAAPAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVAT
LGTVTKDGKTDAPPEGAALNGPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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