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Report for CCDS55916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55916.1 Public Homo sapiens 14 ABHD12B 24 110 108 CCDS HistoryNCBI Gene:145447Re-query CCDS DB by CCDS ID:55916.1Re-query CCDS DB by GeneID:145447See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337334.7 ENSP00000336693.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337334.7Link to Ensembl Protein Viewer:ENSP00000336693.2Re-query CCDS DB by Nucleotide ID:ENST00000337334Re-query CCDS DB by Protein ID:ENSP00000336693
Original member Current member NCBI NM_001206673.2 NP_001193602.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001206673.2Link to Protein Sequence:NP_001193602.1Re-query CCDS DB by Nucleotide ID:NM_001206673Re-query CCDS DB by Protein ID:NP_001193602Link to BLAST:NP_001193602.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193602.1 362 Q7Z5M8-1 362 100% 0 0

Chromosomal Locations for CCDS 55916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 50872175 50872278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50877952 50878079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50878745 50878847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50880452 50880571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50881596 50881626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50885614 50885659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50885766 50885895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50886647 50886684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50888824 50888903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50901829 50901911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50903389 50903467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50904074 50904192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50904339 50904366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGACGCGCAGGACTGCCAGGCGGCCGCATCGCCCGAGCCGCCCGGGCCCCCAGCCCGTAGCTGCGTGG
CCGCCTGGTGGGACATGGTCGACCGCAACCTGCGATATTTTCCACACTCCTGTTCAATGCTCGGAAGAAA
AATTGCTGCTCTGTATGACAGCTTTACTAGTAAATCCTTAAAAGAACACGTTTTCCTTCCTCTGATAGAC
ATGCTAATTTATTTTAATTTTTTCAAAGCCCCATTTCTTGTGGATTTAAAGAAACCAGAGTTAAAGATTC
CTCACACAGTGAACTTCTACCTGAGAGTTGAACCTGGGGTGATGCTAGGGATCTGGCACACAGTCCCCAG
CTGCCGGGGGGAAGATGCCAAGGGGAAGGACTGTTGCTGGTATGAAGCAGCCCTTCGTGATGGGAACCCA
ATTATTGTTTATCTTCATGGCAGTGCAGAACACAGGGCAGCTTCGCACAGACTGAAGCTGGTAAAGGTGC
TGAGTGATGGTGGCTTTCATGTCTTGTCTGTTGACTACAGAGGATTTGGGGACTCTACAGGTAAGCCCAC
AGAGGAGGGACTGACTACGGATGCCATTTGTGTCTATGAGTGGACCAAGGCAAGAAGTGGCATCACTCCC
GTGTGTCTCTGGGGCCACTCTCTGGGTACAGGAGTTGCAACAAATGCTGCAAAAGTGCTAGAAGAAAAAG
GATGCCCAGTTGATGCTATTGTCTTGGAAGCTCCATTTACCAACATGTGGGTTGCAAGTATCAATTATCC
CTTGTTAAAGATTTACCGGAACATTCCAGGATTTTTACGTACACTTATGGATGCCCTGAGAAAAGACAAA
ATAATCTTTCCTAATGATGAAAATGTTAAATTCCTTTCTTCTCCTCTTCTCATCTTACATGGAGAGGATG
ACAGGACAGTGCCTTTGGAGTATGGGAAAAAGCTCTATGAAATTGCACGCAATGCATACAGGAACAAAGA
GAGGGTCAAGATGGTTATCTTTCCTCCTGGCTTCCAACACAACCTGCTTTGTAAAAGCCCCACACTGTTA
ATAACCGTGAGAGATTTCCTGAGCAAGCAGTGGTCATGA

Translation (362 aa):
MDAQDCQAAASPEPPGPPARSCVAAWWDMVDRNLRYFPHSCSMLGRKIAALYDSFTSKSLKEHVFLPLID
MLIYFNFFKAPFLVDLKKPELKIPHTVNFYLRVEPGVMLGIWHTVPSCRGEDAKGKDCCWYEAALRDGNP
IIVYLHGSAEHRAASHRLKLVKVLSDGGFHVLSVDYRGFGDSTGKPTEEGLTTDAICVYEWTKARSGITP
VCLWGHSLGTGVATNAAKVLEEKGCPVDAIVLEAPFTNMWVASINYPLLKIYRNIPGFLRTLMDALRKDK
IIFPNDENVKFLSSPLLILHGEDDRTVPLEYGKKLYEIARNAYRNKERVKMVIFPPGFQHNLLCKSPTLL
ITVRDFLSKQWS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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