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Report for CCDS55406.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55406.1 Public Homo sapiens X ZNF674 24 110 108 CCDS HistoryNCBI Gene:641339Re-query CCDS DB by CCDS ID:55406.1Re-query CCDS DB by GeneID:641339See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55406.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000414387.6 ENSP00000428248.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414387.6Link to Ensembl Protein Viewer:ENSP00000428248.1Re-query CCDS DB by Nucleotide ID:ENST00000414387Re-query CCDS DB by Protein ID:ENSP00000428248
Original member Current member NCBI NM_001146291.2 NP_001139763.1 Accepted alive Link to Nucleotide Sequence:NM_001146291.2Link to Protein Sequence:NP_001139763.1Re-query CCDS DB by Nucleotide ID:NM_001146291Re-query CCDS DB by Protein ID:NP_001139763Link to BLAST:NP_001139763.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139763.1 575 Q2M3X9-2 575 100% 0 0

Chromosomal Locations for CCDS 55406.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 46499843 46501332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46528350 46528445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46528783 46528909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46542073 46542087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1728 nt):
ATGGCCATGTCCCAGGAATCATTGACCTTCAAGGACGTGTTTGTGGACTTCACCCTGGAGGAGTGGCAGC
AACTGGACTCTGCCCAGAAGAACCTCTACAGGGATGTCATGCTTGAGAACTACAGCCACCTGGTGTCCGT
GGGGCATCTAGTTGGGAAGCCAGATGTGATCTTCAGGTTGGGACCAGGTGACGAGTCCTGGATGGCAGAT
GGAGGGACCCCGGTACGGACCTGTGCAGTCTGGGAAGTTGACGAGCAGATAGATCACTACAAGGAAAGCC
AAGACAAATTTCTGTGGCAAGCTGCATTCATAGGCAAGGAAACACTGAAGGATGAAAGTGGTCAAGAATG
TAAAATATGTAGAAAAATCATTTATCTCAACACAGACTTTGTTTCTGTAAAACAAAGACTCCCTAAATAT
TATTCATGGGAAAGGTGTTCAAAACATCATTTAAACTTTCTTGGTCAAAATAGAAGCTATGTAAGAAAGA
AAGATGATGGATGTAAGGCATATTGGAAAGTATGCCTCCATTATAATCTTCATAAAGCTCAACCTGCAGA
GAGATTTTTTGACCCTAATCAACGAGGGAAAGCCCTCCACCAAAAGCAAGCCCTTAGAAAAAGTCAGAGA
AGTCAAACTGGGGAGAAACTCTACAAATGTACTGAATGTGGAAAAGTGTTTATCCAGAAAGCAAACTTAG
TTGTACATCAAAGAACTCACACCGGAGAGAAACCTTATGAATGCTGCGAATGTGCAAAAGCCTTCAGCCA
GAAGTCAACCCTCATAGCACACCAGAGAACTCACACAGGGGAGAAGCCCTATGAATGCAGTGAATGTGGA
AAAACCTTTATCCAGAAGTCAACTCTGATTAAACATCAACGAACTCATACAGGAGAGAAACCATTTGTAT
GTGACAAATGTCCAAAAGCCTTTAAGAGTTCATATCATCTTATTAGACATGAAAAAACACACATTAGACA
AGCATTTTATAAAGGTATTAAATGTACTACGTCCAGCCTTATATATCAAAGAATTCACACAAGTGAGAAA
CCTCAGTGCAGTGAACATGGGAAAGCCTCTGATGAGAAGCCCAGTCCCACTAAACATTGGAGAACTCATA
CAAAAGAGAACATTTATGAGTGTAGTAAATGTGGGAAAAGCTTCAGAGGAAAGTCACACCTCTCTGTTCA
TCAGAGAATTCATACAGGAGAGAAACCCTATGAATGTAGTATATGTGGGAAGACTTTCAGTGGAAAGTCA
CACCTCTCTGTCCATCATAGAACTCATACAGGAGAGAAACCTTATGAATGCAGAAGATGTGGGAAAGCCT
TTGGGGAGAAGTCAACCCTTATTGTACATCAGAGAATGCATACAGGAGAGAAACCCTATAAATGCAACGA
ATGTGGGAAAGCCTTTAGTGAGAAGTCACCACTGATTAAACATCAGAGAATTCATACAGGAGAGAGACCC
TATGAATGCACTGACTGTAAAAAAGCCTTCAGTAGGAAGTCAACTCTCATCAAACATCAGAGAATTCATA
CAGGAGAAAAACCTTACAAATGTAGTGAATGTGGGAAGGCCTTCAGTGTGAAATCAACTCTCATTGTGCA
TCACAGAACTCATACAGGAGAGAAACCTTATGAATGCAGAGACTGTGGGAAAGCATTCAGTGGGAAGTCA
ACTCTCATTAAACATCAGAGAAGTCACACAGGAGATAAAAACCTATGA

Translation (575 aa):
MAMSQESLTFKDVFVDFTLEEWQQLDSAQKNLYRDVMLENYSHLVSVGHLVGKPDVIFRLGPGDESWMAD
GGTPVRTCAVWEVDEQIDHYKESQDKFLWQAAFIGKETLKDESGQECKICRKIIYLNTDFVSVKQRLPKY
YSWERCSKHHLNFLGQNRSYVRKKDDGCKAYWKVCLHYNLHKAQPAERFFDPNQRGKALHQKQALRKSQR
SQTGEKLYKCTECGKVFIQKANLVVHQRTHTGEKPYECCECAKAFSQKSTLIAHQRTHTGEKPYECSECG
KTFIQKSTLIKHQRTHTGEKPFVCDKCPKAFKSSYHLIRHEKTHIRQAFYKGIKCTTSSLIYQRIHTSEK
PQCSEHGKASDEKPSPTKHWRTHTKENIYECSKCGKSFRGKSHLSVHQRIHTGEKPYECSICGKTFSGKS
HLSVHHRTHTGEKPYECRRCGKAFGEKSTLIVHQRMHTGEKPYKCNECGKAFSEKSPLIKHQRIHTGERP
YECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSECGKAFSVKSTLIVHHRTHTGEKPYECRDCGKAFSGKS
TLIKHQRSHTGDKNL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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