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Report for CCDS55311.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55311.1 Public Homo sapiens 9 ANKRD18A 24 110 108 CCDS HistoryNCBI Gene:253650Re-query CCDS DB by CCDS ID:55311.1Re-query CCDS DB by GeneID:253650See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55311.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399703.6 ENSP00000382610.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399703.6Link to Ensembl Protein Viewer:ENSP00000382610.4Re-query CCDS DB by Nucleotide ID:ENST00000399703Re-query CCDS DB by Protein ID:ENSP00000382610
Original member Current member NCBI NM_147195.4 NP_671728.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_147195.4Link to Protein Sequence:NP_671728.2Re-query CCDS DB by Nucleotide ID:NM_147195Re-query CCDS DB by Protein ID:NP_671728Link to BLAST:NP_671728.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_671728.2 992 Q8IVF6-1 992 100% 0 0

Chromosomal Locations for CCDS 55311.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 38572045 38572059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38575476 38575698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38577053 38577264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38577867 38578148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38586183 38586312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38588551 38588663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38593760 38593909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38595486 38596403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38601131 38601204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38603159 38603212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38607426 38607493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38610273 38610410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38611215 38611321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38615594 38615767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38615930 38616044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 38620080 38620285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2979 nt):
ATGAGGAAGCTCTTCAGCTTCGGGAGACGCCTGGGCCAGGCGCTCCTGAGCTCCATGGACCAAGAGTATG
CGGGTCCGGGTTACGACATTCGGGACTGGGAACTGCGGAAGATCCACAGGGCTGCCATCAAGGGCGACGC
CGCGGAGGTGGAGCGCTGCCTGACGCGCAGGTTCCGGGACTTGGACGCCCGCGACAGAAAAGACAGGACT
GTTCTACATTTGGCCTGTGCCCATGGCCGTGTGCAAGTGGTCACTCTCTTGCTGCACAGAAGATGCCAGA
TCGACATCTGTGACAGACTAAACAGGACACCTTTAATGAAGGCTGTACACAGCCAGGAAGAGGCTTGTGC
CATCGTTCTCCTGGAATGTGGCGCCAATCCAAACATTGAGGATATCTACGGCAACACTGCTCTCCATTAT
GCCGTGTATAATAAGGGGACTTCACTGGCAGAAAGACTGCTTTCCCACCATGCAAATATTGAAGCACTAA
ACAAGGAGGGAAACACTCCACTTTTGTTTGCTATAAATTCCAGGAGACAGCATATGGTGGAATTTTTATT
GAAGAACCAGGCAAATATACATGCCGTTGACAATTTCAAAAGAACAGCCCTCATACTTGCAGTACAGCAT
AACTTGTCAAGTATCGTCACCCTCCTGCTTCAACAAAATATACGTATCTCTTCTCAAGACATGTTTGGCC
AAACTGCCGAGGATTATGCTCTTTGTTCTGATTTGAGAAGCATCCGACAACAAATTTTGGAACATAAAAA
TAAAATGCTTAAAAATCATCTTCGAAATGACAATCAAGAAACAGCAGCTATGAAGCCTGCAAATTTGAAA
AAAAGAAAAGAACGTGCAAAAGCAGAACACAACCTAAAAGTGGCTTCAGAGGAAAAGCAAGAAAGGCTCC
AAAGAAGTGAAAATAAACAGCCACAGGATTCTCAAAGTTACGGAAAAAAGAAGGATGCGATGTATGGAAA
TTTTATGTTGAAGAAAGACATTGCCATGCTCAAAGAGGAATTATATGCAATAAAAAATGACAGTCTCAGA
AAGGAAAAGAAATATATTCAGGAAATTAAAAGCATTACAGAAATAAATGCTAACTTTGAAAAGAGTGTAA
GACTCAATGAAAAAATGATAACAAAAACAGTGGCCCGGTATTCGCAACAGCTTAATGATCTGAAAGCTGA
GAATGCAAGGCTGAATTCAGAATTGGAGAAGGAAAAACACAACAAAGAAAGACTAGAAGCTGAAGTTGAA
TCCCTCCATTCTAGCCTGGCCACTGCTATAAATGAGTACAATGAAATTGTGGAAAGAAAAGACCTAGAAC
TAGTTTTATGGAGAGCAGATGATGTTTCTAGACATGAAAAAATGGGTTCTAATATTTCTCAACTAACAGA
TAAGAATGAGTTGCTTACTGAACAGGTCCATAAAGCTCGGGTGAAGTTCAATACCTTAAAAGGTAAGCTC
CGTGAGACAAGAGATGCTCTCAGGGAAAAGACATTGGCTTTAGGAAGTGTACAGCTGGACCTAAGGCAAG
CACAGCATCGAATAAAGGAAATGAAGCAGATGCATCCAAATGGAGAAGCTAAAGAAAGTCAATCCATTGG
AAAGCAGAACTCTTTAGAGGAGAGAATACGTCAACAAGAACTTGAAAATCTCTTGCTTGAACGACAACTA
GAGGATGCTCGTAAGGAAGGCGATAATAAAGAGATAGTCATTAATATCCACAGAGACTGTCTTGAGAATG
GAAAGGAAGATCTTCTAGAAGAAAGAAATAAGGAATTAATGAAAGAATATAATTATTTAAAAGAAAAACT
GCTTCAGTGTGAAAAAGAAAAAGCAGAAAGAGAAGTGATTGTGAGAGAATTTCAAGAAGAACTGGTCGAT
CACCTTAAAACATTTTCAATATCAGAGTCTCCACTGGAAGGTACATCACATTGTCATATTAATTTGAATG
AGACATGGACTTCAAAGAAGAAATTATTTCAAGTAGAAATTCAACCTGAAGAAAAACATGAAGAATTCAG
AAAACTTTTTGAATTAATATCATTACTGAACTATACTGCGGACCAAATAAGAAAGAAAAATCGTGAATTA
GAAGAAGAGGCAACTGGATATAAGAAATGCCTAGAAATGACAATAAATATGTTAAATGCATTTGCAAATG
AGGACTTCAGTTGCCATGGAGACTTAAATACAGACCAACTGAAAATGGATATTCTGTTTAAGAAGCTAAA
ACAGAAGTTTAATGATCTTGTGGCCGAGAAGGAAGCTGTGTCTTCAGAATGTGTCAATTTGGCCAAAGAC
AATGAAGTTCTTCATCAGGAGTTATTATCTATGAGAAATGTACAAGAGAAATGTGAAAAACTTGAGAAGG
ATAAAAAGATGTTGGAAGAAGAAGTATTAAATCTTAAGACACATATGGAAAAAGATATGGTAGAACTTGG
TAAACTACAAGAATATAAATCGGAGCTGGATGAAAGGGCAGTGCAGGAAATAGAAAAATTAGAAGAAATC
CATTTACAGAAACAAGCAGAATATGAAAAACAATTAGAGCAGTTAAACAAGGATAATACGGCTTCACTAA
AAAAGAAGGAACTCACACTTAAAGATGTGGAATGTAAATTCTCCAAAATGAAAACTGCTTATGAAGAGGT
TACAACTGAATTAGAAGAATTTAAGGAAGCCTTTGCAGGAGCAGTGAAAGCTAACAATTCCATGTCAAAA
AAATTAATGAAATCGGATAAGAAAATAGCAGTGATCAGCACCAAGCTCTTTACGGAGAAACAGCGGATGA
AATATTTTCTCAGCACTCTTCCTACAAGGCCAGAACCAGAGTTACCTTGTGTTGAAAATCTTAATAGTAT
AGAACTCAACAGAAAATATATTCCCAAAACGGCCATAAGAATTCCTACTTCAAACCCACAGACTTCAAAT
AACTGCAAGAACTTCTTGACTGAGGTTTTGCTATGTTGA

Translation (992 aa):
MRKLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLDARDRKDRT
VLHLACAHGRVQVVTLLLHRRCQIDICDRLNRTPLMKAVHSQEEACAIVLLECGANPNIEDIYGNTALHY
AVYNKGTSLAERLLSHHANIEALNKEGNTPLLFAINSRRQHMVEFLLKNQANIHAVDNFKRTALILAVQH
NLSSIVTLLLQQNIRISSQDMFGQTAEDYALCSDLRSIRQQILEHKNKMLKNHLRNDNQETAAMKPANLK
KRKERAKAEHNLKVASEEKQERLQRSENKQPQDSQSYGKKKDAMYGNFMLKKDIAMLKEELYAIKNDSLR
KEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQLNDLKAENARLNSELEKEKHNKERLEAEVE
SLHSSLATAINEYNEIVERKDLELVLWRADDVSRHEKMGSNISQLTDKNELLTEQVHKARVKFNTLKGKL
RETRDALREKTLALGSVQLDLRQAQHRIKEMKQMHPNGEAKESQSIGKQNSLEERIRQQELENLLLERQL
EDARKEGDNKEIVINIHRDCLENGKEDLLEERNKELMKEYNYLKEKLLQCEKEKAEREVIVREFQEELVD
HLKTFSISESPLEGTSHCHINLNETWTSKKKLFQVEIQPEEKHEEFRKLFELISLLNYTADQIRKKNREL
EEEATGYKKCLEMTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFNDLVAEKEAVSSECVNLAKD
NEVLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKTHMEKDMVELGKLQEYKSELDERAVQEIEKLEEI
HLQKQAEYEKQLEQLNKDNTASLKKKELTLKDVECKFSKMKTAYEEVTTELEEFKEAFAGAVKANNSMSK
KLMKSDKKIAVISTKLFTEKQRMKYFLSTLPTRPEPELPCVENLNSIELNRKYIPKTAIRIPTSNPQTSN
NCKNFLTEVLLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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