NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5527.1 Public Homo sapiens 7 ZNF107 24 110 108 CCDS HistoryNCBI Gene:51427Re-query CCDS DB by CCDS ID:5527.1Re-query CCDS DB by GeneID:51427See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5527.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344930.7 ENSP00000343443.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344930.7Link to Ensembl Protein Viewer:ENSP00000343443.3Re-query CCDS DB by Nucleotide ID:ENST00000344930Re-query CCDS DB by Protein ID:ENSP00000343443
Original member Current member EBI ENST00000423627.6 ENSP00000400037.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423627.6Link to Ensembl Protein Viewer:ENSP00000400037.1Re-query CCDS DB by Nucleotide ID:ENST00000423627Re-query CCDS DB by Protein ID:ENSP00000400037
Original member Current member NCBI NM_001013746.3 NP_001013768.1 Accepted alive Link to Nucleotide Sequence:NM_001013746.3Link to Protein Sequence:NP_001013768.1Re-query CCDS DB by Nucleotide ID:NM_001013746Re-query CCDS DB by Protein ID:NP_001013768Link to BLAST:NP_001013768.1
Original member Current member NCBI NM_016220.5 NP_057304.1 Accepted alive Link to Nucleotide Sequence:NM_016220.5Link to Protein Sequence:NP_057304.1Re-query CCDS DB by Nucleotide ID:NM_016220Re-query CCDS DB by Protein ID:NP_057304Link to BLAST:NP_057304.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013768.1 783 Q9UII5 783 100% 0 0
NP_057304.1 783 Q9UII5 783 100% 0 0

Chromosomal Locations for CCDS 5527.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 64691942 64691960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64706324 64708656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2352 nt):
ATGGTAGCCAAACCCCCAGTAATGTCTTTTCATTTTGCCCAAGACCTTTGGCCAGAGCAGAACATAAAAG
ATTCTTTCCAGAAAGTGACACTGAGAAGATACGGAAAATGTGAATATGAGAATTTACAGTTAAGAAAAGG
CTGTAAACATGTGGATGAGTGTACGGGGCACAAAGGAGGTCATAATACAGTTAACCAATGTTTGACAGCT
ACCCCAAGCAAAATATTCCAGTGTAATAAATATGTGAAAGTCTTTGATAAATTTTCAAATTCAAATAGAT
ATAAGAGAAGACATACAGGAAACAAACACTTCAAATGTAAAGAATGTAGCAAATCATTTTGCGTGCTTTC
ACAACTAACTCAGCATAGAAGAATTCATACTAGAGTGAATTCCTACAAATGTGAAGAATGTGGAAAAGCC
TTTAACTGGTTCTCAACTCTTACTAAACATAAGAGAATTCATACTGGAGAAAAGCCCTACAAATGTGAAG
AATGTGGCAAAGCCTTTAACCAGTCCTCACAACTTACTAGGCATAAGATAATTCATACTGAAGAGAAACC
CAACAAATGTGAAGAATGTGGCAAGGCCTTTAAACAGGCCTCACACCTTACTATACATAAAATAATTCAT
ACTGGAGAAAAACCTTACAAATATGAAGAATGTGGCAAAGTCTTTAGCCAGTCCTCACACCTTACTACAC
AAAAGATACTTCACACTGGAGAGAACCTCTACAAGTGTAAAGAATGTGGAAAAGCTTTTAACCTATTCTC
AAATCTTACTAACCATAAGAGAATTCATGCTGGGGAGAAACCCTACAAATGTAAAGAATGTGGCAGAGCT
TTTAACATATCCTCAAACCTTAATAAACAGGAGAAAATTCATACTGGAGGGAAACTCAACAAATGTGAAG
AATGTGACAAAGCTTTTAACCGATCCTTAAAACTTACTGCACATAAGAAAATTCTAATGGAAGAGAAACC
CTACAAATGTGAAGAATGTGGCAAAGTCTTTAACCAGTTCTCAACTCTTACTAGACATAAGATAATTCAT
ACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAACCAATCTTCAAACCTTACTGAAC
ATAAGAAAATTCATACTGCAGAGAAATCCTATAAATGTGAAGAATGTGGCAAAGCTTTTAACCAACACTC
AAACCTAATTAACCATAGGAAAATTTATTCTGGAGAGAAACCATACAAATGTGAAGAATGTGGAAAAGCT
TTTAATCGATCCTCAACCCTTACTAGACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAG
AATGTGACAGAGCTTTTAGCCAGTCTTCAAACCTTACTGAACATAAGAAAATTCATACTGGAGAGAAACC
CTATAAATGTGAGGAATGTGGCAAAGCTTTTAACCGATTCTCAACCCTTACTAAACATAAGAGAATTCAT
ACTGGAGAAAAACCCTATAAATGTGAAGAATGTGGAAAAGCCTTTAATCAATCCTATCAACTTACTAGAC
ATAAGATAGTTCATACTAAAGAGAAACTCAACAAATGTGAAGAATTTGGCAAGGCCTTTAAACAGTCCTC
ACACCGTACTATACATAAAATTATTCATACTGGAGAGAAACCCTACAAATGTGAAGAACATGGCAAAGTT
TTTAACCAGTCCTCAAACCTTACTACACAAAAGATAATTCATACTGGAGAGAACCTCTACAAATTTGAAG
AACATGGAAAAGCTTTTAACCTATTCTCAAACATTACTAACCATAAGATAATTTATACTGGAGAGAAACC
CCACAAATGTGAAGAATGTGGAAAAGCTTATAACCGATTCTCAAACCTAACTATACATAAGAGAATTCAT
ACGGGAGAGAAACCTTACCAATGTGCAGAATGTGGCAAAGCCTTTAACTGCTCCTCAACCCTTAATAGAC
ATAAGATAATTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTGGCAAAGCTTTTAACCTATCCTC
AACCCTTACTGCACATAAGAAAATTCATACTGGAGAGAAACCCTATAAATGTGAAGAATGTGGCAAAGCT
TTTAACCAATCCTCAAACCTTACTACACATAAGAAAATTCATACTTCAGAGAAACCCTACAAATGTGAAG
AATGTGGCAAATCCTTTAACCAGTTCTCATCTCTTAATATACATAAGATAATTCATACTGGAGAGAAACC
CTACAAATGTGGAGATTATGGCAGAGCTTTCAACCTATCCTCAAATCTTACTACACATAAGAAAATTCAT
ACTGGAGAGAAACCCTACAAATGTGAGTATGGCAAAACTTAA

Translation (783 aa):
MVAKPPVMSFHFAQDLWPEQNIKDSFQKVTLRRYGKCEYENLQLRKGCKHVDECTGHKGGHNTVNQCLTA
TPSKIFQCNKYVKVFDKFSNSNRYKRRHTGNKHFKCKECSKSFCVLSQLTQHRRIHTRVNSYKCEECGKA
FNWFSTLTKHKRIHTGEKPYKCEECGKAFNQSSQLTRHKIIHTEEKPNKCEECGKAFKQASHLTIHKIIH
TGEKPYKYEECGKVFSQSSHLTTQKILHTGENLYKCKECGKAFNLFSNLTNHKRIHAGEKPYKCKECGRA
FNISSNLNKQEKIHTGGKLNKCEECDKAFNRSLKLTAHKKILMEEKPYKCEECGKVFNQFSTLTRHKIIH
TGEKPYKCKECGKAFNQSSNLTEHKKIHTAEKSYKCEECGKAFNQHSNLINHRKIYSGEKPYKCEECGKA
FNRSSTLTRHKKIHTGEKPYKCEECDRAFSQSSNLTEHKKIHTGEKPYKCEECGKAFNRFSTLTKHKRIH
TGEKPYKCEECGKAFNQSYQLTRHKIVHTKEKLNKCEEFGKAFKQSSHRTIHKIIHTGEKPYKCEEHGKV
FNQSSNLTTQKIIHTGENLYKFEEHGKAFNLFSNITNHKIIYTGEKPHKCEECGKAYNRFSNLTIHKRIH
TGEKPYQCAECGKAFNCSSTLNRHKIIHTGEKPYKCKECGKAFNLSSTLTAHKKIHTGEKPYKCEECGKA
FNQSSNLTTHKKIHTSEKPYKCEECGKSFNQFSSLNIHKIIHTGEKPYKCGDYGRAFNLSSNLTTHKKIH
TGEKPYKCEYGKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH