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Report for CCDS55211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55211.1 Public Homo sapiens 8 RHOBTB2 24 110 108 CCDS HistoryNCBI Gene:23221Re-query CCDS DB by CCDS ID:55211.1Re-query CCDS DB by GeneID:23221See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55211.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000522948.5 ENSP00000429141.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000522948.5Link to Ensembl Protein Viewer:ENSP00000429141.1Re-query CCDS DB by Nucleotide ID:ENST00000522948Re-query CCDS DB by Protein ID:ENSP00000429141
Original member Current member NCBI NM_001160037.2 NP_001153509.1 Accepted alive Link to Nucleotide Sequence:NM_001160037.2Link to Protein Sequence:NP_001153509.1Re-query CCDS DB by Nucleotide ID:NM_001160037Re-query CCDS DB by Protein ID:NP_001153509Link to BLAST:NP_001153509.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153509.1 734 Q9BYZ6-3 734 100% 0 0

Chromosomal Locations for CCDS 55211.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 22995872 22995882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23004425 23004626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23005372 23005475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23005960 23006145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23006728 23007746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23007993 23008111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23010538 23010688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23014690 23014778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23015638 23015743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23017252 23017469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2205 nt):
ATGAAAGCGCGGTCCCGTTTAATGGATTCTGACATGGATTATGAAAGGCCAAACGTAGAGACCATCAAGT
GCGTTGTGGTGGGGGACAACGCCGTGGGTAAGACCAGGCTCATCTGTGCCCGCGCTTGCAATGCCACCCT
CACCCAGTACCAGCTGCTGGCCACGCATGTGCCCACAGTATGGGCCATCGACCAATATCGTGTGTGCCAG
GAGGTGCTGGAACGCTCCCGAGACGTGGTAGATGATGTCAGCGTCTCTCTGCGCCTCTGGGACACCTTTG
GAGACCACCACAAAGACCGTCGCTTTGCTTATGGGAGATCTGATGTGGTGGTTCTGTGCTTCTCCATTGC
CAACCCCAATTCCCTCCACCATGTCAAGACCATGTGGTACCCAGAAATCAAGCACTTCTGCCCCCGAGCA
CCTGTCATCTTGGTGGGCTGCCAGTTGGACCTGCGCTACGCTGACCTGGAGGCTGTCAACAGGGCTAGGC
GACCCTTGGCTAGGCCCATCAAACCTAATGAAATCCTGCCCCCAGAGAAGGGTCGGGAGGTGGCCAAGGA
GCTGGGCATCCCCTACTATGAGACCAGCGTGGTGGCCCAGTTCGGCATCAAGGACGTCTTTGACAACGCC
ATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTTCTGGAAGTCCCACCTCCGCAATGTGCAGCGGC
CTCTGCTGCAGGCACCCTTCCTACCCCCCAAGCCACCGCCCCCGATCATCGTGGTGCCCGACCCTCCCTC
CAGCAGCGAGGAGTGCCCCGCCCACCTCCTGGAGGACCCGCTCTGCGCGGACGTCATCCTGGTGCTGCAG
GAGCGGGTGCGCATCTTTGCCCACAAGATCTACCTCTCCACCTCTTCCTCCAAGTTCTATGACCTGTTCC
TCATGGACCTGAGTGAGGGGGAGCTGGGGGGCCCCTCGGAGCCAGGGGGCACCCACCCAGAGGACCACCA
GGGCCACTCTGATCAACACCACCACCATCACCACCACCACCATGGGCGAGACTTCCTGCTCCGAGCAGCC
AGCTTTGACGTGTGCGAGAGCGTGGATGAGGCTGGGGGCTCCGGTCCTGCTGGCCTCCGTGCTTCCACCA
GCGACGGGATCTTACGGGGCAACGGAACAGGGTACCTACCGGGCAGGGGTCGTGTGCTGTCTTCCTGGAG
CCGAGCTTTTGTGAGCATCCAGGAAGAGATGGCAGAAGATCCTCTCACCTACAAATCCCGGCTGATGGTG
GTGGTGAAGATGGACAGTTCCATCCAGCCGGGGCCCTTCCGGGCTGTCCTCAAGTACCTGTACACGGGGG
AGCTAGATGAGAACGAGCGTGACCTCATGCACATTGCCCACATTGCTGAGCTGCTCGAGGTCTTTGATCT
GCGCATGATGGTGGCCAACATTCTCAACAATGAGGCCTTCATGAACCAGGAGATCACCAAGGCCTTCCAC
GTCCGCCGGACCAACCGGGTTAAGGAGTGCTTGGCAAAAGGCACCTTCTCAGATGTGACCTTCATCCTGG
ATGATGGCACCATCAGCGCCCACAAGCCCCTGTTGATTTCCAGCTGTGACTGGATGGCTGCCATGTTTGG
GGGGCCATTTGTGGAGAGCTCCACCCGGGAGGTGGTGTTTCCCTACACAAGCAAGAGCTGCATGCGGGCC
GTGCTGGAATACCTCTACACCGGCATGTTCACCTCCAGCCCCGACCTGGATGACATGAAGCTCATCATTC
TAGCCAACCGCCTCTGCCTGCCACACCTGGTTGCCCTCACAGAGCAGTACACAGTGACCGGGCTGATGGA
AGCGACCCAGATGATGGTGGACATCGATGGGGACGTCCTTGTGTTCCTGGAACTGGCTCAGTTCCACTGT
GCGTACCAGCTGGCCGACTGGTGTCTCCACCACATCTGCACCAACTACAACAACGTGTGCCGCAAGTTCC
CCCGAGACATGAAGGCCATGTCCCCAGAAAACCAGGAGTATTTCGAGAAGCATCGGTGGCCACCTGTGTG
GTACCTGAAGGAGGAAGATCATTACCAGCGGGCACGGAAGGAGCGTGAGAAGGAGGACTACCTCCACCTC
AAGCGGCAGCCCAAACGGCGTTGGCTCTTCTGGAACAGTCCATCCTCCCCGTCTTCCTCGGCAGCCTCCT
CCTCATCCCCATCTTCCTCCTCGGCTGTGGTCTGA

Translation (734 aa):
MKARSRLMDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQ
EVLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRA
PVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELGIPYYETSVVAQFGIKDVFDNA
IRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEECPAHLLEDPLCADVILVLQ
ERVRIFAHKIYLSTSSSKFYDLFLMDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAA
SFDVCESVDEAGGSGPAGLRASTSDGILRGNGTGYLPGRGRVLSSWSRAFVSIQEEMAEDPLTYKSRLMV
VVKMDSSIQPGPFRAVLKYLYTGELDENERDLMHIAHIAELLEVFDLRMMVANILNNEAFMNQEITKAFH
VRRTNRVKECLAKGTFSDVTFILDDGTISAHKPLLISSCDWMAAMFGGPFVESSTREVVFPYTSKSCMRA
VLEYLYTGMFTSSPDLDDMKLIILANRLCLPHLVALTEQYTVTGLMEATQMMVDIDGDVLVFLELAQFHC
AYQLADWCLHHICTNYNNVCRKFPRDMKAMSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHL
KRQPKRRWLFWNSPSSPSSSAASSSSPSSSSAVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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