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Report for CCDS55091.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55091.1 Public Homo sapiens 7 ABCB5 24 110 108 CCDS HistoryNCBI Gene:340273Re-query CCDS DB by CCDS ID:55091.1Re-query CCDS DB by GeneID:340273See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55091.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443026.6 ENSP00000406730.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443026.6Link to Ensembl Protein Viewer:ENSP00000406730.2Re-query CCDS DB by Nucleotide ID:ENST00000443026Re-query CCDS DB by Protein ID:ENSP00000406730
Original member Current member NCBI NM_001163942.2 NP_001157414.1 Accepted alive Link to Nucleotide Sequence:NM_001163942.2Link to Protein Sequence:NP_001157414.1Re-query CCDS DB by Nucleotide ID:NM_001163942Re-query CCDS DB by Protein ID:NP_001157414Link to BLAST:NP_001157414.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157414.1 131 Q2M3G0-2 131 100% 0 0

Chromosomal Locations for CCDS 55091.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 20651423 20651623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 20658506 20658676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 20659066 20659089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGGTGGATGAGAATGACATCAGAGCTTTAAATGTGCGGCATTATCGAGACCATATTGGAGTGGTTAGTC
AAGAGCCTGTTTTGTTCGGGACCACCATCAGTAACAATATCAAGTATGGACGAGATGATGTGACTGATGA
AGAGATGGAGAGAGCAGCAAGGGAAGCAAATGCGTATGATTTTATCATGGAGTTTCCTAATAAATTTAAT
ACATTGGTAGGGGAAAAAGGAGCTCAAATGAGTGGAGGGCAGAAACAGAGGATCGCAATTGCTCGTGCCT
TAGTTCGAAACCCCAAGATTCTGATTTTAGATGAGGCTACGTCTGCCCTGGATTCAGAAAGCAAGTCAGC
TGTTCAAGCTGCACTGGAGAAGGATACCCCCAGGTATTCATTTTGA

Translation (131 aa):
MVDENDIRALNVRHYRDHIGVVSQEPVLFGTTISNNIKYGRDDVTDEEMERAAREANAYDFIMEFPNKFN
TLVGEKGAQMSGGQKQRIAIARALVRNPKILILDEATSALDSESKSAVQAALEKDTPRYSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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