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Report for CCDS53938.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53938.1 Public Homo sapiens 15 WDR76 24 110 108 CCDS HistoryNCBI Gene:79968Re-query CCDS DB by CCDS ID:53938.1Re-query CCDS DB by GeneID:79968See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53938.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381246.6 ENSP00000370645.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381246.6Link to Ensembl Protein Viewer:ENSP00000370645.2Re-query CCDS DB by Nucleotide ID:ENST00000381246Re-query CCDS DB by Protein ID:ENSP00000370645
Original member Current member NCBI NM_001167941.2 NP_001161413.1 Accepted alive Link to Nucleotide Sequence:NM_001167941.2Link to Protein Sequence:NP_001161413.1Re-query CCDS DB by Nucleotide ID:NM_001167941Re-query CCDS DB by Protein ID:NP_001161413Link to BLAST:NP_001161413.1

Chromosomal Locations for CCDS 53938.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43828097 43828366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43835061 43835150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43836161 43836216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43839605 43839728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43842415 43842516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43842628 43842671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43843901 43844054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43851087 43851245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43856946 43857163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43858671 43858823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43861333 43861386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43866128 43866392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1689 nt):
ATGTGCCCCAAATCCCTATCAGAAAAGAATTCTAACAATGAAGTGGCGTGTAAGAAGACTAAAATAAAGA
AAACTTGCAGAAGGATTATACCTCCAAAGATGAAAAACACATCTTCCAAGGCAGAATCCACGCTGCAAAA
TTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTACAACCCAAGAGAACGGCAGATGCGATGAATCTC
AGTGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAAGATACCACACCATCCCTGGATTTTTCGG
GATTGTCACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAACGCAGACTTTTTTGCTTCTCTTCA
GTTGTCTGAGTCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGCCTCCTAAATCCAAAAGAAAG
AAGCCTAAGAGAGAAAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAAGTTGATCCTTCGGGAG
TTTCATTACCAGCAGCTCCAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTTACCTCCTGGGCC
TTTAGAAATGACTTCTGAAAATCAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACACATGGGCA
GGAATGAGCAAGCCAAGTAGTAAGAACACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCCAATT
TAAATGGCATGGTCATTAGTGAAGATACCGTTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCT
CCATCCATCAGAAACTAGAACTTTGGTAGCAGTTGGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTG
ACCCAGCAACCTAAAGAAGATGGAGTTTATGTTTTTCATCCCCATAGTCAGCCAGTTAGCTGTCTTTACT
TCTCACCCGCCAATCCGGCCCACATACTGTCACTGAGCTATGATGGCACGTTACGCTGTGGGGATTTTTC
CAGGGCTATTTTTGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTTTCCTCCTTCGACTTCTTGGCAGAA
GATGCCTCCACTTTAATAGTAGGACACTGGGATGGAAATATGTCACTGGTGGATAGACGGACACCTGGAA
CTTCTTATGAGAAACTTACCAGTTCTTCTATGGGAAAAATAAGAACTGTTCATGTCCACCCAGTGCATAG
ACAGTATTTTATCACTGCCGGATTGAGGGATACTCATATTTATGATGCAAGGCGATTGAATTCCAGGAGA
AGTCAGCCTTTGATTTCTTTGACTGAACATACAAAGAGCATTGCTTCCGCCTATTTTTCACCTCTTACTG
GTAACAGAGTGGTGACCACATGTGCTGATTGTAATCTGAGAATTTTTGACAGCAGCTGTATATCTTCTAA
GATTCCGCTCCTCACCACCATCAGGCACAACACTTTCACTGGGCGATGGCTGACCAGGTTCCAAGCCATG
TGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCATGGCCCATCCACGACGGGTAGAAATCTTCC
ATGAGACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTTGTCTCTGTGTGTTCCATCAATGCCAT
GCACCCAACTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGATACATGTTTTTATGAATGAAAAA
AGCTGCTGA

Translation (562 aa):
MCPKSLSEKNSNNEVACKKTKIKKTCRRIIPPKMKNTSSKAESTLQNSSSAVHTESNKLQPKRTADAMNL
SVDVESSQDGDSDEDTTPSLDFSGLSPYERKRLKNISENADFFASLQLSESAARLREMIEKRQPPKSKRK
KPKRENGIGCRRSMRLLKVDPSGVSLPAAPTPPTLVADETPLLPPGPLEMTSENQEDNNERFKGFLHTWA
GMSKPSSKNTEKGLSSIKSYKANLNGMVISEDTVYKVTTGPIFSMALHPSETRTLVAVGAKFGQVGLCDL
TQQPKEDGVYVFHPHSQPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAIFEEVYRNERSSFSSFDFLAE
DASTLIVGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTVHVHPVHRQYFITAGLRDTHIYDARRLNSRR
SQPLISLTEHTKSIASAYFSPLTGNRVVTTCADCNLRIFDSSCISSKIPLLTTIRHNTFTGRWLTRFQAM
WDPKQEDCVIVGSMAHPRRVEIFHETGKRVHSFGGEYLVSVCSINAMHPTRYILAGGNSSGKIHVFMNEK
SC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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