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Report for CCDS53631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53631.1 Public Homo sapiens 11 OR5M1 24 110 108 CCDS HistoryNCBI Gene:390168Re-query CCDS DB by CCDS ID:53631.1Re-query CCDS DB by GeneID:390168See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53631.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641076.1 ENSP00000493124.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641076.1Link to Ensembl Protein Viewer:ENSP00000493124.1Re-query CCDS DB by Nucleotide ID:ENST00000641076Re-query CCDS DB by Protein ID:ENSP00000493124
Original member Current member NCBI NM_001004740.2 NP_001004740.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004740.2Link to Protein Sequence:NP_001004740.1Re-query CCDS DB by Nucleotide ID:NM_001004740Re-query CCDS DB by Protein ID:NP_001004740Link to BLAST:NP_001004740.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004740.1 315 Q8NGP8 315 100% 0 0

Chromosomal Locations for CCDS 53631.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56612555 56613502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGTTCTCCCCAAACCACACCATAGTGACAGAATTCATTCTCTTGGGACTGACAGACGACCCAGTGCTAG
AGAAGATCCTGTTTGGGGTATTCCTTGCGATCTACCTAATCACACTGGCAGGCAACCTGTGCATGATCCT
GCTGATCAGGACCAATTCCCACCTGCAAACACCCATGTATTTCTTCCTTGGCCACCTCTCCTTTGTAGAC
ATTTGCTATTCTTCCAATGTTACTCCAAATATGCTGCACAATTTCCTCTCAGAACAGAAGACCATCTCCT
ACGCTGGATGCTTCACACAGTGTCTTCTCTTCATCGCCCTGGTGATCACTGAGTTTTACATCCTTGCTTC
AATGGCATTGGATCGCTATGTAGCCATTTGCAGCCCTTTGCATTACAGTTCCAGGATGTCCAAGAACATC
TGTGTCTGTCTGGTCACTATCCCTTACATGTATGGGTTTCTTAGTGGGTTCTCTCAGTCACTGCTAACCT
TTCACTTATCCTTCTGTGGCTCCCTTGAAATCAATCATTTCTACTGCGCTGATCCTCCTCTTATCATGCT
GGCCTGCTCTGACACCCGTGTCAAAAAGATGGCAATGTTTGTAGTTGCAGGCTTTAATCTCTCAAGCTCT
CTCTTCATCATTCTTCTGTCCTATCTTTTCATTTTTGCAGCGATCTTCAGGATCCGTTCTGCTGAAGGCA
GGCACAAAGCCTTTTCTACGTGTGCTTCCCACCTGACAATAGTCACTTTGTTTTATGGAACCCTCTTCTG
CATGTACGTAAGGCCTCCATCAGAGAAGTCTGTAGAGGAGTCCAAAATAACTGCAGTCTTTTATACTTTT
TTGAGCCCAATGCTGAACCCATTGATCTATAGCCTACGGAACACAGATGTAATCCTTGCCATGCAACAAA
TGATTAGGGGAAAATCCTTTCATAAAATTGCAGTTTAG

Translation (315 aa):
MFSPNHTIVTEFILLGLTDDPVLEKILFGVFLAIYLITLAGNLCMILLIRTNSHLQTPMYFFLGHLSFVD
ICYSSNVTPNMLHNFLSEQKTISYAGCFTQCLLFIALVITEFYILASMALDRYVAICSPLHYSSRMSKNI
CVCLVTIPYMYGFLSGFSQSLLTFHLSFCGSLEINHFYCADPPLIMLACSDTRVKKMAMFVVAGFNLSSS
LFIILLSYLFIFAAIFRIRSAEGRHKAFSTCASHLTIVTLFYGTLFCMYVRPPSEKSVEESKITAVFYTF
LSPMLNPLIYSLRNTDVILAMQQMIRGKSFHKIAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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