NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5291.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5291.1 Public Homo sapiens 6 PRR18 24 110 108 CCDS HistoryNCBI Gene:285800Re-query CCDS DB by CCDS ID:5291.1Re-query CCDS DB by GeneID:285800See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5291.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322583.5 ENSP00000319590.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322583.5Link to Ensembl Protein Viewer:ENSP00000319590.3Re-query CCDS DB by Nucleotide ID:ENST00000322583Re-query CCDS DB by Protein ID:ENSP00000319590
Original member Current member NCBI NM_175922.4 NP_787118.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175922.4Link to Protein Sequence:NP_787118.2Re-query CCDS DB by Nucleotide ID:NM_175922Re-query CCDS DB by Protein ID:NP_787118Link to BLAST:NP_787118.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_787118.2 295 Q8N4B5 295 100% 0 0

Chromosomal Locations for CCDS 5291.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 166307255 166308142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGCCCTTCCCGCCCATGCCGCCGCCGCCCGCCCCCGCCCCGGGGGCCCAAGCCGCGCGCCAGTTACCCC
GGAGGCCCTGCGCCGCGGGGGACAAGAAGAAGAGGCCCCCACAGCGGCCCGAGGGGCTCCTCTCCAGCTC
CTGGCCCTCCGCCACGCTCAAGAGGCCGCCGGCCCGGCGCGGCCCCGGCCTGGACAGGACGCAGCCGCCG
GCCCCTCCGGGCGTCTCCCCCCAGGCCTTGCCCAGCCGCGCGCGGGCCCCAGCCACGTGCGCCCCGCCCC
GGCCGGCAGGCTCCGGCCACAGCCCAGCGAGGACCACCTATGCGGCGACCTCGGCGGGGACGGGGACCAC
CGCCGCGGGCACCTCCTCGGGGGCGGGGCCTTGTCCAGACTCCGCTGCGCGCTTCTGCCTGAATCTCACC
CCCGAGGCCGTCCTGGTCATCCAGAAGCGTCATCTGGAGAAGCAGCTGCTGGCGCGGCCCCGCAGGCCCT
TCCCCTCACCCTCGGCCGAACCCAGGCGCCTACTCGCCCCGTGTCTCCCGGCTAGGGCCGCGGGCCCGCG
GAGGGGCGGCCCCGCCAGCGACCCCGACGCACCCCCCACCGCCGGCCAGGGCCGCCGCGCGCCTCCGCCC
GGCGCCCAGCTGCTGCACGGCGGCCTGCAGGTTCCCCAGCTCAGCCCGCGGCCCGGGGCCCTGCGGCCGA
TGCTCAAGGTGTCGCTGCTCAACGAGCGGCACAGGTACGACGACGTGGAGTACGAGGAGGAGCCAGAGGC
GGTGGACGAGGGCCTGGTACGCAAGTGCACGGAGTGGCTGCGCGGCGTGGAGTCCGCGGCTGCCGCGCGG
GGCCGGGCGGGGGCCCTGGACTCACGGCGGCACCTGAGCACGCTGTGA

Translation (295 aa):
MPFPPMPPPPAPAPGAQAARQLPRRPCAAGDKKKRPPQRPEGLLSSSWPSATLKRPPARRGPGLDRTQPP
APPGVSPQALPSRARAPATCAPPRPAGSGHSPARTTYAATSAGTGTTAAGTSSGAGPCPDSAARFCLNLT
PEAVLVIQKRHLEKQLLARPRRPFPSPSAEPRRLLAPCLPARAAGPRRGGPASDPDAPPTAGQGRRAPPP
GAQLLHGGLQVPQLSPRPGALRPMLKVSLLNERHRYDDVEYEEEPEAVDEGLVRKCTEWLRGVESAAAAR
GRAGALDSRRHLSTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH