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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS52906.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
52906.1 |
Public |
Mus musculus |
9 |
Col6a6 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 52906.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000098441.9 |
ENSMUSP00000096040.3 |
Accepted |
alive |
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NCBI |
NM_001102607.1 |
NP_001096077.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001096077.1 |
2265 |
Q8C6K9-1 |
2265 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 52906.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6798 nt): ATGCTGCTGGTTTTGTGCCTGACAATGATTTGTTTCCACGTGTGTGTGAACCAAGATTCTGGCCCCGAGT ACGCAGACGTGGTGTTTCTGGTGGACAGCTCCGATCACCTAGGGCTTAAGTCCTTTCCTCTTGTGAAAAC TTTCATCCACAAGATGATCAGCAGCCTCCCCATAGAGGCCAACAAGTACCGCGTGGCCCTGGCCCAGTAC AGCGATGCTCTCCACAATGAGTTCCAGCTGGGCACCTTCAAGAACAGGAACCCCATGCTGAACCACCTGA AGAAGAACTTCGGGTTCATCGGTGGCTCCCTGAAGATAGGGAACGCCCTGCAGGAGGCTCACAGGACCTA TTTCTCTGCTCCCACAAATGGAAGAGACAAGAAACAGTTCCCCCCAATCCTGGTGGTGCTGGCTTCAGCA GAGTCTGAGGATGATGTGGAAGAGGCTGCGAAGGCCCTGCGGGAAGATGGGGTGAAAATCATCTCTGTGG GGGTGCAGAAGGCTTCTGAGGAAAACCTGAAGGCGATGGCCACCTCTCAGTTCCATTTCAATCTCAGGAC TGCCAGAGACCTCAGCGTGTTTGCCCCAAACATGACAGAGATCATCAAGGATGTGACTCAGTACAGGGAA GGAATGGCAGATGACATTATTGTAGAAGCCTGCCAAGGCCCTTCTGTGGCTGATGTGGTGTTCCTGTTGG ATATGGCCATCAACGGCAGCCAGGAGGACCTAGATCATCTTAAAGCATTCCTGGGCGAAAGCATCTCTGC CCTGGACATAAAGGAAAATTGCATGAGGGTTGGCCTGGTGACCTATAGCAATGAGACAAGGGTGATCAGC TCTCTGAGCACGGGTAACAACAAGACAGAAGTCTTGCAGCGCATACAGGATCTGTCCCCTCAAGTAGGGC AGGCCTACACTGGAGCTGCCCTCAGAAAGACTAGGAAGGAAATCTTCAGTGCACAGAGGGGCAGTCGGAA GAACCAAGGGGTCCCTCAGATCGCTGTGCTGGTGACCCACAGAGCATCAGAAGACAACGTGACCAAGGCA GCTGTCAACCTCCGGCGGGAGGGAGTGACCATCTTTACCATGGGCATAGAGGGGGCTAACCCAGACGAGC TGGAGAAGATCGCATCCCACCCTGCGGAGCAGTTCACCTCCAAACTGGGCAACTTCTCTGAGCTGGCCAC CCACAACCAGACGTTCCTGAAGAAACTGCGGAACCAAATCACACACACGGTCTCTGTCTTCTCAGAACGG ACTGAGACCCTCAAATCTGCCTGTGTGGACACAGAGGAAGCCGATATCTATCTACTCATTGATGGTTCAG GGAGCACCCAGCCCACAGACTTCCATGAAATGAAGACCTTCCTGTCAGAGGTGGTAGGCATGTTCAACAT TGCTCCCCACAAGGTGCGAGTAGGGGCCGTGCAGTACGCCGACACCTGGGACTTGGAATTTGAGATCTCT AAGTATAGTAACAAGCCTGACTTGGGAAAGGCCATCGAGAATATCAGGCAGATGGGTGGGAATACCAACA CAGGGGCGGCTTTGAACTTCACACTGAAGCTGTTGCAAAGAGCAAAGAAGGAACGAGGAAGCAAAGTGCC GTGTCACCTGGTGGTTCTGACCAATGGCATGTCTCGGGACAGCGTCCTGGGGCCTGCCCATAAGCTGAGA GAGGAAAACATCAGAGTGCATGCGATCGGTGTCAAGGAAGCCAACCAAACGCAGCTTCGGGAGATAGCGG GAGAGGAAAAGCGAGTTTACTACGTCCATGAGTTCGATGCCTTGAGGAACATAAGGAACCAAGTGGTTCA GGAGATCTGTGCTGAAGAAGCCTGCAGAGACATGAAAGCGGACATCATGTTTCTGGTGGACAGCTCTGGC AGCATCGGACCTGAAAACTTCAGCAAGATGAAGATGTTTATGAAGAACCTGGTGAGCAAATCCCAGATCG GGGCTGACCGGGTGCAAATTGGCGTGGTCCAGTTCAGCCACGAAAACAAGGAGGAGTTTCAGCTCAACAC GTTCATGTCTCAAAGTGACATCGCCAACGCCATTGACCGAATGACTCACATTGGAGAAACAACCTTGACG GGCAGTGCCCTGACCTTTGTGTCTCAGTACTTCAGTCCCGATAAGGGGGCCAGGCCCAATGTCAGGAAGT TCCTCATTCTTATCACGGATGGTGAGGCTCAGGACATAGTAAGGGACCCAGCGATCGCCCTTCGAAAAGA AGGTGTGATTATCTATTCTGTGGGAGTATTCGGCTCCAATGTCACCCAGCTTGAGGAGATCAGTGGAAAG CCAGAGATGGTTTTCTATGTTGAGAATTTTGACATTCTGCAGCATATCGAAGATGACCTCGTTCTGGGGA TCTGCAGTCCCCGTGAAGAATGCAAGCGGATTGAAGTTTTGGATGTGGTGTTTGTCATCGATAGCTCCGG CAGCATTGACTATCAAGAATATAACATCATGAAGGACTTCATGATTGGCTTGGTGAAAAAAGCTGACGTG GGCAAGAATCAGGTCCGGTTTGGAGCCCTGAAGTATGCTGATGACCCCGAAGTGCTGTTTTACCTGGATG AACTAGGCACGAAGCTGGAGGTAGTTTCAGTGCTCCAGAATGACCATCCCATGGGTGGAAATACTTACAC CGCTGAGGCCCTCGCCTTCTCCGATCACATGTTCACCGAAGCCCGGGGCAGCCGTCTGCACAAGGGAGTC CCCCAAGTCCTCATTGTGATTACCGACGGGGAATCTCATGACGCAGAGAAGCTCAACACCACCGCCAAGG CCCTGAGAGACAAAGGCATTCTCGTCCTGGCTGTGGGGATTGCCGGTGCCAACAGCTGGGAGCTCTTGGC CATGGCAGGGTCAAGCGACAAGTACTACTTTGTAGAGACCTTCGGAGGCCTGAAGGGAATATTTTCCGAT GTGTCAGCCAGTGTCTGTAACTCTTCAAAAGTTGATTGTGAAATTGAAAAGGTTGACCTTGTATTCCTCA TGGATGGTTCAAACAGCATCCATCCGGATGACTTCCAGAAGATGAAGGGGTTTTTGGTGTCGGTCGTTCA AGACTTCGATGTCAGCCTCAACAGAGTCCGCATAGGCGTGGCACAGTTCAGCGACAGCTACAGGTCAGAG TTTCTGCTGGGGACGTTCACCGGGGAGAGGGAGATATCCACCCAGATTGAGGGCATCCAGCAGATCTTTG GATACACCCACATCGGAGATGCTCTCAGGAAGGTGAAGTATTACTTTCAGCCAGACATGGGCAGCAGGAT CAACGCAGGTACCCCCCAGGTGCTGCTGGTCCTCACAGATGGCCGGTCCCAAGACGAGGTAGCTCAGGCC GCCGAGGAGCTGAGACACAAAGGTGTGGACATCTACTCGGTGGGCATCGGGGATGTGGATGACCAGGAAT TGGTCCAGATCACGGGGACCGCGGAGAAAAAACTGACCGTGCATAACTTCGACGAGCTAAAAAAGGTGAA GAAAAGGATCGTTCGGAACATCTGTACCTCAGGTGGTGAGAGCAATTGCTTTGTGGATGTCGTGGTTGGA TTTGACATCTCAAGCCTGCAGAGAGGGCAGACTCTGCTCGAAGGTCAGCCTTGGATGGGATCCTACCTCC AAGACCTCTTACGTGCCATCAGCTCCCTCAATGGGGTAAGCTGTGAAGTGGGCACAGAGACTCAGGTGAG CATAGCTTTTCAAGTGACGAACGCTATGGAAAGATACCCTTCCAAGTTTGAGATCTACAGTGAGAACATA CTAAGCAGCCTGCAGGGTGTGACCGTGAATGGCCCGTCTCGCCTCAACGCCAACCTGCTGAGTTCTCTGT GGGATACGTTTCAGAATAAGTCAGCTGCTCGTGGGAAGGTGGTCCTTCTATTTTCAGATGGACTGGATGA TGGCATTGAGAAACTTGAACAGAAGTCTGATGAACTCAGGAAGGAAGGCCTGAATGCCCTCATAACCATT GCTGTGGATGGAGCTGCCGATTCCAGTGACCTGGCGGACCTCCTCTACATTGAATTTGGGAAAGGATTTG AATACAGGACACAGTTCACAATTGGAATGAGGAACCTTGGGAGTCAGCTGTCAAGGCAACTAATCAATGT TGCAGAGAGGACCTGCTGCTGTCTGCTCTGCAAGTGCACAGGAGGGGACGGCGCCATGGGGGATCCAGGC TCAGCAGGAAAAAAGGGACCCCCAGGATTCAAAGGCAGTGATGGCTACCTCGGAGAGGAGGGCATTGCTG GAGAAAGAGGAGCCTCTGGGCCAATGGGAGAGCAAGGCACGAAGGGATGCTTCGGTGCCAAAGGGCCTAA GGGAACCAGAGGACTCAGTGGAGAAGAGGGTGAAGTCGGGGAAGATGGGCTTGATGGATTAGATGGAGAA CAGGGTGACCATGGGATTCCTGGAAGAAGAGGAGAAAAGGGTGACGAGGGATCTCAGGGAAACCCAGGCA GGAGAGGGGCTGCCGGTGACCGTGGAGCAAAGGGACTGCGAGGAGATCCGGGAACTCCTGGACGTGACAG TAGCATACAAGGACCCAAGGGCTTGAAAGGAGACCTTGGAAGACAAGGCAGAAGAGGCTGGCCAGGCTCT CCTGGAACACCAGGCTCAAGAAGAAAGATGGTAGTTCATGGCCGAAGAGGACACATAGGCCCACAGGGAA ATCCAGGAACCCCGGGCCCAGATGGACTTGCAGGTTCGCCAGGACTTAGAGGCCCGCAGGGTCCAAGAGG AGAGGTCGGTGAGAAAGGAGAAAAAGGAAGTCTGGGAATGAAAGGTCCTCAGGGGCCTCCAGGACCCGGA GGACAAGCTGGGAGCCAAGGCCATTTGGGAAGCCAAGGAAACAAAGGAGAACCTGGAGACCTGGGAGAAA AGGGAGCTGCTGGCTTTCCAGGTCCTCGGGGCCTGCAGGGTGACGACGGCAGCCCGGGATATGGTAGCAT TGGCCGCAAAGGGACAAAGGGGCAAGAAGGATTCCCCGGAGAGAGTGGACTGAAGGGTGATATTGGGGAC CCTGGTGATCCAGGAGAAGCTGGTCCCAAGGGAGCCAGAGGCAAAACGGTATCTGCTGGGATTCCAGGAG AGCCGGGGTCCCCCGGGGAGCCAGGACCCCCTGGACGGAAGGGTGTGAAAGGGGCCCGAGGACTGGCTTC GTTTTCCACATGTGACCTCATTCAGTACGTGCGGGACCACAGTCCTGGCAGACATGGAAAACCTGAGTGC CCAGTGCATCCAACTGAGTTGGTGTTTGTCCTGGACCAGTCCCGGGATGTCACAGAGCAGGACTTTGAGC GAATGAAGGGGATGATGGTCTCCCTAGTTAGGGATGTCAAGGTTAGGGAGGCCAACTGCCCCGTGGGTGC CCGCGTTGCCATCCTAGCCTACAACTCCCACACCAGGCACCTCATCCGCTTCTCAGATGCCTACAGGAAG GACCAGCTGCTCACGGCGATTAAAGCTCTTCCTTATGAGAGATCCTCCGACAGCAGGGAGATTGGCAAAG CCATGAGGTTCATCTCCAGGAATGTCTTCAAGAGAACCCTTCCAGGGGCTCATGTGAGAAGAATCGCCAC GTTCTTTAGCAGTGGTCCATCGGCCGACGCCCAGACCATTACCACAGCCGCCATGGAGTTCAGTGCCCTG GACATTGTACCTGTGGTGATTGCGTTCAGCAACGTGCCCTCGGTCAAGCGCGCCTTTTCAATTGATGACA CTGGCACATTCCAAGTCATTGTGGTTCCCTCCGGGTCTGATGAAGGGCCAGCGTTAGAGAGACTCCAGCG GTGCACTTTCTGCTATGATCTATGCAAGCCGGATGCTTCGTGTGACCAAGCCAAACCACCCCCCATTCAG TCCTACCTGGACACTGCATTCCTACTGGATGGCTCTCGGCACGTGGGAAGTGCAGAGTTTGAAGACATGA GAGACTTTCTAGAGGCACTGCTAGATCACTTCGAAATCACTTCGGAGCCAGAGACATCTGTCACTGGAGA CAGGGTGGCCCTGCTGAGCCATGCCCCCCTCGACTTCCTACCCAACACCCAGAGGAGTCCGGTTAGAACT GAGTTCAACCTAACCAGCTATAGCAGTAAGCGCCTCATGAAGAGACACGTGGATCAGGCAGTCCAGCAGC TGCATGGAGATGCTTTTCTTGGCCATGCCCTCGGGTGGGCACTGGACAACGTCTTTTTAAACACCCCCAA TTTGAGACGAAACAAAGTCATATTTGTGATATCTGCTGGGGAAACCAGCCACCTGGATGCGGAAACCTTA AAGAAAGAGTCCCTACGAGCCAAATGTCATGGGTATGCCCTCTTTGTCTTTTCCTTGGGCCCTGACTGGG ATGACAAGGAACTGGAAGACCTGGCCAGCCACCCCGTAGACCAGCACTTGATCCAGCTTGGCCGAATTCA TAAACCTGACCACGGATACAGTGTGAAGTTTGTGAAGTCTTTTATAAACTCCATCAGGCATGGGATAAAC AAGTATCCACCGGTCAACCTCAAAGCCAAGTGCAACAGACTCGGCTCTAGGGATCTGAAGCCGCCCCCAC GCCAGTTTCGAAGCTTTGTTCCAGGACCACAGAAAGCCAACCTCAAAGACCACACAGCAGAGGCAGCAAA GCTCTTTCAAGATAAAAAACGCCTTTCAAGTATGCTGAAAGGGGGCAGAGCTACTATTTCAAGTCTTTCC AGAAGCACACGCTATGCCTTTAAACAGGGGAAAGAAGCAATAAAAGCCACTTCTAAACTCGGTAAACGAA GTGCCTGA
Translation (2265 aa): MLLVLCLTMICFHVCVNQDSGPEYADVVFLVDSSDHLGLKSFPLVKTFIHKMISSLPIEANKYRVALAQY SDALHNEFQLGTFKNRNPMLNHLKKNFGFIGGSLKIGNALQEAHRTYFSAPTNGRDKKQFPPILVVLASA ESEDDVEEAAKALREDGVKIISVGVQKASEENLKAMATSQFHFNLRTARDLSVFAPNMTEIIKDVTQYRE GMADDIIVEACQGPSVADVVFLLDMAINGSQEDLDHLKAFLGESISALDIKENCMRVGLVTYSNETRVIS SLSTGNNKTEVLQRIQDLSPQVGQAYTGAALRKTRKEIFSAQRGSRKNQGVPQIAVLVTHRASEDNVTKA AVNLRREGVTIFTMGIEGANPDELEKIASHPAEQFTSKLGNFSELATHNQTFLKKLRNQITHTVSVFSER TETLKSACVDTEEADIYLLIDGSGSTQPTDFHEMKTFLSEVVGMFNIAPHKVRVGAVQYADTWDLEFEIS KYSNKPDLGKAIENIRQMGGNTNTGAALNFTLKLLQRAKKERGSKVPCHLVVLTNGMSRDSVLGPAHKLR EENIRVHAIGVKEANQTQLREIAGEEKRVYYVHEFDALRNIRNQVVQEICAEEACRDMKADIMFLVDSSG SIGPENFSKMKMFMKNLVSKSQIGADRVQIGVVQFSHENKEEFQLNTFMSQSDIANAIDRMTHIGETTLT GSALTFVSQYFSPDKGARPNVRKFLILITDGEAQDIVRDPAIALRKEGVIIYSVGVFGSNVTQLEEISGK PEMVFYVENFDILQHIEDDLVLGICSPREECKRIEVLDVVFVIDSSGSIDYQEYNIMKDFMIGLVKKADV GKNQVRFGALKYADDPEVLFYLDELGTKLEVVSVLQNDHPMGGNTYTAEALAFSDHMFTEARGSRLHKGV PQVLIVITDGESHDAEKLNTTAKALRDKGILVLAVGIAGANSWELLAMAGSSDKYYFVETFGGLKGIFSD VSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFQKMKGFLVSVVQDFDVSLNRVRIGVAQFSDSYRSE FLLGTFTGEREISTQIEGIQQIFGYTHIGDALRKVKYYFQPDMGSRINAGTPQVLLVLTDGRSQDEVAQA AEELRHKGVDIYSVGIGDVDDQELVQITGTAEKKLTVHNFDELKKVKKRIVRNICTSGGESNCFVDVVVG FDISSLQRGQTLLEGQPWMGSYLQDLLRAISSLNGVSCEVGTETQVSIAFQVTNAMERYPSKFEIYSENI LSSLQGVTVNGPSRLNANLLSSLWDTFQNKSAARGKVVLLFSDGLDDGIEKLEQKSDELRKEGLNALITI AVDGAADSSDLADLLYIEFGKGFEYRTQFTIGMRNLGSQLSRQLINVAERTCCCLLCKCTGGDGAMGDPG SAGKKGPPGFKGSDGYLGEEGIAGERGASGPMGEQGTKGCFGAKGPKGTRGLSGEEGEVGEDGLDGLDGE QGDHGIPGRRGEKGDEGSQGNPGRRGAAGDRGAKGLRGDPGTPGRDSSIQGPKGLKGDLGRQGRRGWPGS PGTPGSRRKMVVHGRRGHIGPQGNPGTPGPDGLAGSPGLRGPQGPRGEVGEKGEKGSLGMKGPQGPPGPG GQAGSQGHLGSQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPGYGSIGRKGTKGQEGFPGESGLKGDIGD PGDPGEAGPKGARGKTVSAGIPGEPGSPGEPGPPGRKGVKGARGLASFSTCDLIQYVRDHSPGRHGKPEC PVHPTELVFVLDQSRDVTEQDFERMKGMMVSLVRDVKVREANCPVGARVAILAYNSHTRHLIRFSDAYRK DQLLTAIKALPYERSSDSREIGKAMRFISRNVFKRTLPGAHVRRIATFFSSGPSADAQTITTAAMEFSAL DIVPVVIAFSNVPSVKRAFSIDDTGTFQVIVVPSGSDEGPALERLQRCTFCYDLCKPDASCDQAKPPPIQ SYLDTAFLLDGSRHVGSAEFEDMRDFLEALLDHFEITSEPETSVTGDRVALLSHAPLDFLPNTQRSPVRT EFNLTSYSSKRLMKRHVDQAVQQLHGDAFLGHALGWALDNVFLNTPNLRRNKVIFVISAGETSHLDAETL KKESLRAKCHGYALFVFSLGPDWDDKELEDLASHPVDQHLIQLGRIHKPDHGYSVKFVKSFINSIRHGIN KYPPVNLKAKCNRLGSRDLKPPPRQFRSFVPGPQKANLKDHTAEAAKLFQDKKRLSSMLKGGRATISSLS RSTRYAFKQGKEAIKATSKLGKRSA
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