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Report for CCDS52832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52832.1 Public Mus musculus 9 Dis3l 23 108 98 CCDS HistoryNCBI Gene:213550Re-query CCDS DB by CCDS ID:52832.1Re-query CCDS DB by GeneID:213550See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 52832.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168844.8 ENSMUSP00000129772.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168844.8Link to Ensembl Protein Viewer:ENSMUSP00000129772.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000168844Re-query CCDS DB by Protein ID:ENSMUSP00000129772
Original member Current member NCBI NM_001001295.2 NP_001001295.2 Accepted alive Link to Nucleotide Sequence:NM_001001295.2Link to Protein Sequence:NP_001001295.2Re-query CCDS DB by Nucleotide ID:NM_001001295Re-query CCDS DB by Protein ID:NP_001001295Link to BLAST:NP_001001295.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001295.2 1053 Q8C0S1-1 1053 100% 0 0

Chromosomal Locations for CCDS 52832.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 64307043 64307348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64307430 64307604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64308280 64308425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64310167 64310345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64310442 64310596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64311446 64311979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64313934 64314026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64314553 64314800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64317688 64317849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64319083 64319252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64322402 64322581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64324622 64324700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64325708 64325884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64329433 64329568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64330787 64330915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64339479 64339632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 64340993 64341131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3162 nt):
ATGCTGCAGAAGCGGGAGAAGGTGCTGCTGCTGAGGACCTTCCAGGGTCGGACGCTGCGGATCGTGCGTG
AACACTACCTGCGGCCCAGCGTGCCTTGCAACAGCCCGCTGTGCCCGCAGCCTGCCGCCTGCCGCAACGA
TGGGAAGCTCCTGGCTGCCGAAGTCACTCATTACGTGATCCCAGACTGGAAAGTTGTCCAGGATTACCTC
GAGGTTCTGGAGTTCCCGGAGTTGAAGGGAGTTATTTTCATGCAAACGGCCTGTCAAGCTGTGCAGCACC
AGAGAGGCCGGAGACAGTATAACAAACTGCGAAACCTCCTGAAGGATGCTCGCCATGACTGCGTTCTCTT
TGCTAACGAGTTCCAGCAGCACTGTTACCTCCCCCGGGAAAAGGGGGAAGCCATGGAGAAGTGGCAGACC
AGGAGCATATACAACTCAGCGGTTTGGTACTATCACCACTGTGAGGACAGGATGCCCATCGTTATGGTGA
CAGAAGATGAAGAGGCCATTCAGAAGTATGGAAGTGAAACAGAAGGCGTATTTGTCATTTCTTTCAAGAA
TTACCTGGACAACTTCTGGCCAGATTTGAAGGCTGCCCACGATCTCTGTGACTCCATCCTTCAGTCTCGC
CGGGAAAGGGAGACTGAGAGTCAGGAAACCCATGGGAAAGAGTACCCAGAACATCTTCCCCTAGAAGTAC
TGGAAGCGGGCATCAAATCTGGACGCTACATCCAGGGAATTCTGAATGTCAACAAGCACAGAGCTCAGAT
TGAAGCTTTCGTTCGCCTACACGGAGCCAGCAGTAAGGACTCAGGCTTGGTCAGCGACATCCTCATCCAT
GGCTCGAAGGCTCGGAACCGCTCCATCCATGGAGACGTCGTGGTGGTGGAGATGCTCCCCAAAAGTGAGT
GGAAAGGGAGAACAGCCGCCCTGGGTGAGAACGACAGTGATGACAAGGCCTCGGGCGAGTCCCCGAGTGA
GCCCATGCCCACAGGTCGAGTGGTAGGCATCCTTCAGAAGAACTGGCGAGATTATGTGGTGACATTTCCA
TCCAAAGAAGAGGTCCAGTCTCAGGGCAAAAATGCTCAGAAGATCCTGGTTACGCCGTGGGATTACAGAA
TCCCTAAGATCCGCATCAGCACCCAGCAAGCAGAAGCCCTCCAGGATTTCAGGGTGGTTGTGCGCATTGA
CTCCTGGGAGGCAACATCAGTGTATCCAAATGGACATTTTGTGCGTGTCTTAGGGAGAATCGGTGATCTG
GAAGGGGAGATTGCAACCATCCTGGTAGAGAACAGTATCTCTGTGGTCCCCTTCTCAGAAGCCCAGATGT
GTGAGATGCCAGTGAACACACCAGAAAACCCTTGGAAAGTGAGTCCCAAAGAAGAGCAAGAGCGGAAGGA
CCTGAGGACCACCCACCTCGTGTTCAGCATCGACCCCAAAGGTTGTGAAGATGTGGATGACACACTCTCA
GTCAGAACCTTGAATAACGGCAACCTGGAGCTGGGGGTCCACATCGCTGACGTCACACACTTTGTGGCCC
CTAACTCTTACATCGATGTTGAAGCTAGAACGAGGGCCACCACTTACTACCTAGCGGACCGTCGCTATGA
CATGCTGCCTTCCATCCTCAGCGCAGACCTCTGCTCCCTCCTGGGAGGCGTTGACCGGTATGCTGTGTCA
GTCATGTGGGAATTAGATAAAACCTCTTATGAAATTAAGAAGGTGTGGTACGGCAGAACCATTATCCGAT
CAGCTTACAAACTGTTCTACGAGGCGGCCCAGGAACTACTGGACGGAAACTTCAGCATTGTTGATGATAT
TCCAGAACTTAAAGCCTTGGACAAGCAGAGCCAACAGGCCAAACTAGAGGAGTTAGTGTGGGCAATTGGA
AAGTTGACAGACATAGCTCGCCACATCCGAGCAAAGAGAGACCGCTGTGGAGCCTTGGAGCTGGAAGGGG
TAGAGGTTCGAGTCCAGCTGGATGACAAGAAGAACATCCGTGACCTCATCCCCAAGCAGCCCCTGGAGGT
TCACGAGACGGTGGCTGAGTGCATGATCCTAGCCAACCACTGGGTGGCCAAGAAGATCTGGGAGAGCTTC
CCCCACCAGGCTCTGCTGCGCCAGCACCCTCCACCACACCAGGAGTTTTTCTCAGAGCTCCGGGAATGTG
CTAAAGCAAAAGGCTTCTTCATAGACACACGGTCCAATAAAACCCTGGCTGACTCTCTGGATAGTGCAAA
TGACCCCAAGGACCCCCTGGTAAACAAGCTGCTGCGCTCCATGGCCACCCAGGCCATGTCCAACGCGCTC
TACTTCTCTACGGGATCCTGCGCAGAGGAGGAGTTCCATCATTACGGGCTGGCCTTAGATAAATACACCC
ACTTTACCTCTCCAATAAGAAGATACTCAGATATTGTAGTACATCGGCTATTAATGGCAGCCATTTCAAA
AGACAAGAAAATGGAGATTAAAGAAAATTTGTTCAGCAACAAAAATCTTGAGGAATTATGCAGACACATT
AACAACAGAAACCGAGCGGCACAGCGGTCTCAGAAGCAGTCCACCGAGCTCTTCCAGTGCATGTACTTTA
AAGACCGAGATGCAGAAACTGAGGAGCGCTGCATAGCTGATGGAGTTATTTATTCCATTAGAACAAATGG
TGTACTTGTATTTATACCAAGGTTTGGGATTAAAGGTGCTGCTTATCTGAAGAATAAAGATAGCTTAGTG
ATCTCCTGTGGCCCAGAGGGCAGCTCTGAATGGAAGCCAGGATCCCTACAAAGATCTCAAAACAAGATCA
TCTCTACCACAGCTGGAGGGCAGTCTGTTACATTTCATCTATTTGACCATGTGACGGTAAGAATTTCTGT
CCAGGCCTCGCGCTGCCACTCTGATACAATCAGGCTTGAAATAGTAAGCAACAAGCCATACATGATCCCA
AACACAGAACTCTGTCACCAGAGCTCCCTGCTGAAGAGTGAGTTAGTGAAGGAAGTAACCCGATCTGTGG
AGGAAGCGCAGCTTGCACAAGAAGTCAAAGGCAAGGTGATTCAGGAAGAGCATCAAGAATACTGCCAGAC
AAAGGGAAGAAGTCTGTACACACTTCTGGAGGAGATAAGGGACCTAGCTCTTCTGGATGTCTCTGACAGT
TGTGCAATGTGA

Translation (1053 aa):
MLQKREKVLLLRTFQGRTLRIVREHYLRPSVPCNSPLCPQPAACRNDGKLLAAEVTHYVIPDWKVVQDYL
EVLEFPELKGVIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANEFQQHCYLPREKGEAMEKWQT
RSIYNSAVWYYHHCEDRMPIVMVTEDEEAIQKYGSETEGVFVISFKNYLDNFWPDLKAAHDLCDSILQSR
RERETESQETHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIH
GSKARNRSIHGDVVVVEMLPKSEWKGRTAALGENDSDDKASGESPSEPMPTGRVVGILQKNWRDYVVTFP
SKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAEALQDFRVVVRIDSWEATSVYPNGHFVRVLGRIGDL
EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPKGCEDVDDTLS
VRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLPSILSADLCSLLGGVDRYAVS
VMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNFSIVDDIPELKALDKQSQQAKLEELVWAIG
KLTDIARHIRAKRDRCGALELEGVEVRVQLDDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESF
PHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDSANDPKDPLVNKLLRSMATQAMSNAL
YFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKENLFSNKNLEELCRHI
NNRNRAAQRSQKQSTELFQCMYFKDRDAETEERCIADGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDSLV
ISCGPEGSSEWKPGSLQRSQNKIISTTAGGQSVTFHLFDHVTVRISVQASRCHSDTIRLEIVSNKPYMIP
NTELCHQSSLLKSELVKEVTRSVEEAQLAQEVKGKVIQEEHQEYCQTKGRSLYTLLEEIRDLALLDVSDS
CAM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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