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Report for CCDS52683.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52683.1 Public Mus musculus 8 Adad2 23 108 98 CCDS HistoryNCBI Gene:75773Re-query CCDS DB by CCDS ID:52683.1Re-query CCDS DB by GeneID:75773See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52683.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098361.3 ENSMUSP00000095964.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098361.3Link to Ensembl Protein Viewer:ENSMUSP00000095964.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098361Re-query CCDS DB by Protein ID:ENSMUSP00000095964
Original member Current member NCBI NM_029428.2 NP_083704.1 Accepted alive Link to Nucleotide Sequence:NM_029428.2Link to Protein Sequence:NP_083704.1Re-query CCDS DB by Nucleotide ID:NM_029428Re-query CCDS DB by Protein ID:NP_083704Link to BLAST:NP_083704.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083704.1 561 Q9D5P4 561 100% 0 0

Chromosomal Locations for CCDS 52683.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 119612781 119613132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119614095 119614235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119614744 119614791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119614903 119615028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119615112 119615262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119615340 119615507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119615611 119615840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119615933 119616176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119616409 119616529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119616614 119616718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1686 nt):
ATGGCGAGTGTGGACGAGGGTGGGCGCAGGAGACCTCGACTGGCAGCGTCGCTGCAGATCAGCCCCGGGC
CTTGGAAGCCCTCAGGAGGGCAGGAGCCCACGGAGGCTGGGGATGCGGCCCCTAGGACCGCTGAGCATGG
GGTGGCTGGGGCACAAGAGGCCCACAGGGAGGCCTGCAAGGCCCTGGGGGGCTCAGTTCTGAGCCCGGGG
CCTGCGGGCGACTTCCCCGGGGCCCTCCATGGGCTCAGCATGCTGCCCAAGGACCCACCCCCGGCCCAAG
CCGTGGCCCTGCTCACCCAGTGCATGGCTAACCTGGGTGTCTCTCTCACCTTTTTGGAGGACCAGACTGC
AGGTCCTGGCTCCTCCTTCTCTGTGTGTGCAGACCTGGATGGGTTGGTCTGTCCTGCGGGGACAGGGAGC
AGCAAGCTGGAAGCCAAACAGCAGGCAGCGCTCTCTGCCCTTCAGTACATCCAGAAGCAGCTGGAGAGAC
CAGAGCCCCTGGTGACTCCCCGCCAGCCTCTGCTCACCTCTCTCAGCATAGAGACTATCCTGACCCACGA
GCAGCGCTGTGCAGCCGTGGTCAGTGCCGGCTTGGACCGACTCCTGAGTGAGAGCTCACCGTACCAGGCC
TGTAAGGGGACGGTGGCTGCAGTCATCCTGGAGAGAGAGGTCCAAGGCAGCATTGGCCACTCCAAAGAGA
CCTATGAGCTGGTGGCACTAGGCACAGGCAGCAGCAGCTGCGCCGGCTGGCTGGAGTTCTCAGGCCGTCG
GCTCCACGACTGCCATGGTCTGGTCATCGCCCGCAGGGCCCTGCTGAGGTTCTTCTTCCGGCAGCTCCTA
CTGGTCACACAGGGGGGTCCCAAGGGCCAGGAGCGGTCAGTGCTGACCCCCCAGCCCGGGCCTGGGCCCC
CCTTCGCACTCAAGCCTGGGGTCTTCCTGCACCTGTATGTGAGCAACACCCCCAAGGGGGCAGCCCATGA
CATCTATCTCCCACTGGCCTCAGAAGACAGCGTCCTGCACAGCCCAGCCTTCCGCCTACAGGCCCATGTG
TGTGGACAGCTGAAGCCTGTATCCTATGTGGCGCCTGCCCTCCGAGATACCCACGTGGGCTGCCTCTCAG
CCAGCGACAAGCTGGCCCGTTGGGCCATCCTTGGGCTGGGAGGTGGGCTGCTAGCCCACTTCCTGCCGCC
ACTCTACGCCACCAGCCTTGTTCTAGCTGATCCCTGCCACGACCCCTCAACTCTGAACCGGGTCATTCAT
TCCCGGCCTAGACTAGACAGTGTCTTGGGATCGTGTCTTCCATGTCCCTATGTCCGCACCACCTTGCACC
TGTTTGCTGGGCCTCTGGTCGCCCCCTCTGACCCCGGGCCCAGCACCTGCCACAGCCTGAGCCTCAACTG
GAGCCTGGGGGACCCTGACATCGAAGTTGTTGATGTGGCCACCGGACGTGTGAAGACTGACTCCAGCGTT
GGGCCCCCCTCCCGTCTCTGCAAAGCCGCCTTCCTCTCAGCATTCCGCCAGGTTGCCAGAGCTCTGGAGA
AGCCCCAGCTTCTATCTCTGCAGACCTATGAGGCTGCCAAGGCTGTCCCCTACAGGGAAGCTCGCCAGCA
GCTCTCTCTCCTCCTGGACCAGCAGGGCCTGGGGGCCTGGCCCTCAAAGCCATTGGTGGGTAAATTCAGA
CACTGA

Translation (561 aa):
MASVDEGGRRRPRLAASLQISPGPWKPSGGQEPTEAGDAAPRTAEHGVAGAQEAHREACKALGGSVLSPG
PAGDFPGALHGLSMLPKDPPPAQAVALLTQCMANLGVSLTFLEDQTAGPGSSFSVCADLDGLVCPAGTGS
SKLEAKQQAALSALQYIQKQLERPEPLVTPRQPLLTSLSIETILTHEQRCAAVVSAGLDRLLSESSPYQA
CKGTVAAVILEREVQGSIGHSKETYELVALGTGSSSCAGWLEFSGRRLHDCHGLVIARRALLRFFFRQLL
LVTQGGPKGQERSVLTPQPGPGPPFALKPGVFLHLYVSNTPKGAAHDIYLPLASEDSVLHSPAFRLQAHV
CGQLKPVSYVAPALRDTHVGCLSASDKLARWAILGLGGGLLAHFLPPLYATSLVLADPCHDPSTLNRVIH
SRPRLDSVLGSCLPCPYVRTTLHLFAGPLVAPSDPGPSTCHSLSLNWSLGDPDIEVVDVATGRVKTDSSV
GPPSRLCKAAFLSAFRQVARALEKPQLLSLQTYEAAKAVPYREARQQLSLLLDQQGLGAWPSKPLVGKFR
H


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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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