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Report for CCDS52586.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52586.1 Public Mus musculus 8 Tmem221 23 108 98 CCDS HistoryNCBI Gene:434325Re-query CCDS DB by CCDS ID:52586.1Re-query CCDS DB by GeneID:434325See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 52586.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052072.7 ENSMUSP00000058317.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052072.7Link to Ensembl Protein Viewer:ENSMUSP00000058317.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000052072Re-query CCDS DB by Protein ID:ENSMUSP00000058317
Original member Current member NCBI NM_001100462.1 NP_001093932.1 Accepted alive Link to Nucleotide Sequence:NM_001100462.1Link to Protein Sequence:NP_001093932.1Re-query CCDS DB by Nucleotide ID:NM_001100462Re-query CCDS DB by Protein ID:NP_001093932Link to BLAST:NP_001093932.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093932.1 230 Q8K071 230 100% 0 0

Chromosomal Locations for CCDS 52586.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 71555087 71555142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71555758 71555988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71557820 71557905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71558490 71558809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (693 nt):
ATGGGCCGTTCCTACGGAGGTCGGGTACTGGCCGCGATGACCCTACTGGGCATCCCGGCCGCGGTGCTGG
TCGCGCTGGCTGCGCAGCTGCTGTTCCAGCTCCAGGCAGGGCGCGCGGAGCTTCGGCGCGTACGCACCGA
CGGGCTGCACCCGGAGCTGGACCCCGATGCCGGGCTACCTGAAGCTGCGGCTGGGGCATTGCTGCCGCTG
GCGACCGCGCTGGCCGCGCTGGCACAGGTCCTCGGGCTTAGCTGCTTGCTGCTCGCCGCGCTCTGTGGTC
ACCTGGGCGCCGAGTTGGCACGCGGGCCGGGGCCGGGCAGGTCGGACTGGTTTCTGTATGACTGCCGCCT
CCTCAGGCACTCAGCGCTTGGCCTGTTCTGCTGTGGGGTCTCCGTCTACTTAGCAGCACTGGCCATCTAT
GCCCTGCTGCTGTTCGAGATCGAGGCTGGCGCAGCAGCTGCATCCATCCTGGGTTCAGGTGCCCTCATCC
TGGTGGCGATAATGACGCACACCCTGTTCCGGGCTGTTCAGGCCACTCGTCGGGGTCTCCGGGAGCTGTC
TCCACCATCCTTTGAAGATGAGCCGGCCCGGCCTTCAGAAGACTCCAAATCTGGTTGCAGAGCTCAGCCC
CCGCAGGATGAGGAAACGGAGACCCCAATAGGGGCTGTGACTCACCAAGGGTCCCATTTCTGA

Translation (230 aa):
MGRSYGGRVLAAMTLLGIPAAVLVALAAQLLFQLQAGRAELRRVRTDGLHPELDPDAGLPEAAAGALLPL
ATALAALAQVLGLSCLLLAALCGHLGAELARGPGPGRSDWFLYDCRLLRHSALGLFCCGVSVYLAALAIY
ALLLFEIEAGAAAASILGSGALILVAIMTHTLFRAVQATRRGLRELSPPSFEDEPARPSEDSKSGCRAQP
PQDEETETPIGAVTHQGSHF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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