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Report for CCDS52403.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52403.1 Public Mus musculus 7 Taok2 23 108 98 CCDS HistoryNCBI Gene:381921Re-query CCDS DB by CCDS ID:52403.1Re-query CCDS DB by GeneID:381921See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52403.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000117394.1 ENSMUSP00000112963.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117394.1Link to Ensembl Protein Viewer:ENSMUSP00000112963.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117394Re-query CCDS DB by Protein ID:ENSMUSP00000112963
Original member Current member NCBI NM_001163775.2 NP_001157247.1 Accepted alive Link to Nucleotide Sequence:NM_001163775.2Link to Protein Sequence:NP_001157247.1Re-query CCDS DB by Nucleotide ID:NM_001163775Re-query CCDS DB by Protein ID:NP_001157247Link to BLAST:NP_001157247.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157247.1 1240 Q6ZQ29-1 1240 100% 0 0

Chromosomal Locations for CCDS 52403.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 126869932 126871641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126871906 126872109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126872197 126872562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126874298 126874456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126874649 126874933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126875057 126875224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126875853 126875934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126876026 126876119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126878723 126878814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126878920 126879033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126879191 126879287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126879407 126879452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126880052 126880153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126880248 126880319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126880497 126880628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3723 nt):
ATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGACCCTGATGTGGCTGAGCTCTTCTTCAAGGATGACC
CTGAGAAGCTCTTCTCTGACCTCCGGGAGATCGGCCATGGCAGCTTTGGAGCAGTGTACTTTGCCCGGGA
TGTCCGGAACAGTGAGGTGGTGGCCATCAAGAAGATGTCCTATAGTGGGAAGCAATCAAATGAGAAATGG
CAGGATATCATCAAGGAAGTGCGGTTCTTACAGAAGCTACGGCATCCTAATACCATTCAGTACCGGGGCT
GTTACCTGAGGGAGCACACAGCTTGGCTGGTGATGGAGTATTGCCTGGGCTCAGCTTCTGATCTTCTAGA
AGTGCACAAGAAACCCCTGCAGGAGGTAGAGATTGCAGCTGTGACCCATGGGGCTCTTCAGGGCCTGGCA
TATCTACACTCACACAACATGATCCATAGAGATGTGAAGGCTGGAAACATCTTGCTGTCAGAACCAGGCT
TGGTAAAACTGGGGGACTTTGGCTCTGCGTCAATCATGGCACCTGCCAACTCTTTTGTGGGTACTCCATA
CTGGATGGCTCCAGAGGTGATCCTAGCCATGGATGAGGGACAATATGATGGCAAAGTGGATGTCTGGTCC
TTGGGGATAACCTGTATTGAGCTAGCGGAGCGGAAGCCACCACTGTTCAACATGAATGCAATGAGTGCCT
TATACCACATTGCACAGAATGAATCTCCTGCTCTCCAGTCAGGACACTGGTCTGAGTACTTCCGGAATTT
TGTTGACTCCTGTCTTCAGAAAATCCCTCAAGACAGACCAACCTCAGAGGTTCTTTTGAAGCACCGCTTT
GTGCTCCGGGAGCGACCGCCCACAGTCATCATGGACCTAATCCAGAGGACCAAGGATGCTGTACGGGAAC
TGGATAACCTGCAGTACCGAAAGATGAAGAAGATACTGTTCCAAGAGGCACCCAATGGCCCTGGTGCTGA
GGCCCCAGAGGAAGAGGAGCTCACACCCTGTTCCCAGGAGGCAGAACCTTACACGCACCGTGCAGGGACA
CTGACCAGTCTAGAGAGCAGCCATTCAGTGCCCAGCATGTCCATCAGCGCCTCCAGCCAGAGCAGCTCAG
TCAACAGCCTAGCAGATGCCTCAGATAATGAAGAAGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAGGA
GGAGGAAGAAGGCCCTGAATCCAGAGAGATGGCCATGATGCAGGAGGGGGAGCATACAGTCACTTCCCAC
AGCTCCATCATCCACCGGCTGCCGGGCTCAGACAACCTATATGATGATCCCTACCAGCCAGAGATGACCC
CAGGTCCACTCCAGCCACCTGCAGCCCCTCCCACCTCCACCTCCTCTTCTGCTCGCCGCAGAGCTTATTG
CCGCAACCGAGACCACTTTGCTACCATTCGTACTGCCTCCCTGGTCAGCCGTCAGATCCAGGAGCATGAG
CAGGACTCAGCCCTGCGAGAGCAGCTGAGTGGCTACAAGCGGATGCGACGTCAGCACCAGAAGCAACTGC
TGGCCCTGGAGTCCCGTCTGAGGGGTGAACGTGAGGAGCACAGTGGGCGGTTACAGCGGGAGCTCGAGGC
ACAGCGGGCTGGCTTTGGGACCGAGGCTGAGAAGCTGGCCCGGAGGCACCAGGCCATTGGTGAGAAGGAG
GCACGGGCTGCTCAGGCGGAGGAGCGGAAGTTCCAGCAGCACATCCTGGGGCAGCAGAAGAAGGAGCTGG
CCGCCCTGCTGGAGGCGCAGAAGCGAACCTACAAGCTGCGGAAGGAGCAGTTGAAAGAGGAGCTCCAGGA
GAACCCTAGCACACCCAAACGAGAGAAGGCTGAGTGGCTGTTGAGGCAAAAGGAGCAGTTGCAACAGTGC
CAGGCAGAAGAGGAAGCGGGGCTGCTGCGGAGGCAGCGCCAGTACTTTGAACTTCAGTGTCGCCAATACA
AGCGCAAGATGCTACTGGCTCGGCACAGCCTAGATCAGGACCTGCTTCGAGAGGACTTGAATAAGAAACA
GACACAGAAGGACTTGGAGTGTGCTCTGCTGTTACGGCAGCATGAGGCTACCCGAGAGCTGGAGCTAAGA
CAGCTCCAGGCTGTCCAGCGCACACGTGCTGAACTTACCCGCCTTCAGCACCAGACAGAACTAGGCAACC
AGCTGGAGTACAACAAGCGACGGGAGCAAGAATTACGGCAGAAGCACGCGGCCCAGGTTCGCCAGCAGCC
CAAGAGCCTCAAAGTACGTGCAGGCCAGCTACCCATGGGCCTCCCTGCTACTGGGGCTCTGGGACCACTC
AGCACAGGCACCCCTAGTGAAGAGCAGCCTTGCTCATCTGGCCAGGAGGCAATCCTGGACCAAAGGATGC
TGGGAGAGGAGGAGGAAGCAGTGCCAGAGAGAAGGATTCTGGGAAAGGAAGGGACTACCTTGGAGCCAGA
GGAGCAGAGGATTCTGGGGGAAGAAATGGGAACCTTTAGTTCCAGCCCACAAAAACATAGGAGTCTGGCT
AATGAGGAAGATTGGGATATATCTGAGGAGATGAAGGAGATTAGAGTCCCATCACTGGCATCCCAGGAGA
GAAATATTATTGGCCAGGAAGAGGCAGCGGCATGGAGTCTGTGGGAGAAGGAGGGTGGGAACCTTGTGGA
TGTGGAGTTCAAGCTTGGCTGGGTCCAGGGTCCAGTTCTGACTCCAGTCCCGGAGGAGGAAGAGGAGGAG
GAAGAAGAGGGAGGGGCTCCAATTGGAACCCACAGGGACCCTGGAGATGGCTGTCCTTCCCCAGATATCC
CCCCAGAGCCACCTCCATCACATCTGAGACAGTACCCTACTAGCCAGCTCCCTGGACTCCTGTCTCATGG
CCTCCTGGCTGGCCTATCCTTTGCAGTGGGGTCCTCCTCTGGCCTCCTGCCCCTACTCCTCCTGCTGCTA
CTCCCATTGCTGGCAGCCCAGGGTGGAGGTGGCTTGCAGGCAGCACTGCTGGCCCTTGAGGTAGGGCTAG
TGGGCCTGGGGGCCTCCTACCTGTTCCTTTGTACAGCTCTACACCTGCCCCCCGGTCTGTTCTTACTCCT
GGCTCAGGGTACTGCACTGTTGGCTGTCCTTAGCCTGAGCTGGCGCAGAGGCCTTATGGGTGTGCCTCTG
GGCCTTGGGGCTGCCTGGCTCCTAGCTTGGCCCAGCCTGGCTTTACCTCTGGCAGCTATGGCAGCTGGGG
GCAAATGGGTACGGCAACAAGGCCCCCAGATGCGTCGGGGTATCTCTCGACTCTGGTTGAGGATTTTGCT
ACGCCTGTCACCCATGGTCTTTCGGGCCCTACAGGGCTGTGGGGCTGTAGGAGACCGGGGGCTGTTTGCC
CTGTACCCTAAGACCAATAAGAATGGTTTCCGAAGTCGACTACCTGTCCCTTGGCCCCGTCAGGGAAATC
CTCGCACTACTCAACACCCCCTAGCTCAGTTAACAAGAGTTTGGGCTGTGTGCAAGGGCTGGAACTGGCG
CCTAGCACGGGCTAGCCACAGATTAGCTTCTTGCTTGCCCCCCTGGGCTGTTCATATACTAGCCAGCTGG
GGCCTGCTTAAGGGTGAACGGCCTAGTCGGATCCCTCGGCTGCTGCCACGCAGCCAACGCCGTCTTGGGC
TCTCTGCTTCCCGACAGCTACCACCAGGGACTGTAGCTGGGCGGAGATCTCAGACTCGCAGGACCCTGCC
TCCCTGGAGGTAA

Translation (1240 aa):
MPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW
QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA
YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS
LGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF
VLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKILFQEAPNGPGAEAPEEEELTPCSQEAEPYTHRAGT
LTSLESSHSVPSMSISASSQSSSVNSLADASDNEEEEEEEEEEEEEEEEEGPESREMAMMQEGEHTVTSH
SSIIHRLPGSDNLYDDPYQPEMTPGPLQPPAAPPTSTSSSARRRAYCRNRDHFATIRTASLVSRQIQEHE
QDSALREQLSGYKRMRRQHQKQLLALESRLRGEREEHSGRLQRELEAQRAGFGTEAEKLARRHQAIGEKE
ARAAQAEERKFQQHILGQQKKELAALLEAQKRTYKLRKEQLKEELQENPSTPKREKAEWLLRQKEQLQQC
QAEEEAGLLRRQRQYFELQCRQYKRKMLLARHSLDQDLLREDLNKKQTQKDLECALLLRQHEATRELELR
QLQAVQRTRAELTRLQHQTELGNQLEYNKRREQELRQKHAAQVRQQPKSLKVRAGQLPMGLPATGALGPL
STGTPSEEQPCSSGQEAILDQRMLGEEEEAVPERRILGKEGTTLEPEEQRILGEEMGTFSSSPQKHRSLA
NEEDWDISEEMKEIRVPSLASQERNIIGQEEAAAWSLWEKEGGNLVDVEFKLGWVQGPVLTPVPEEEEEE
EEEGGAPIGTHRDPGDGCPSPDIPPEPPPSHLRQYPTSQLPGLLSHGLLAGLSFAVGSSSGLLPLLLLLL
LPLLAAQGGGGLQAALLALEVGLVGLGASYLFLCTALHLPPGLFLLLAQGTALLAVLSLSWRRGLMGVPL
GLGAAWLLAWPSLALPLAAMAAGGKWVRQQGPQMRRGISRLWLRILLRLSPMVFRALQGCGAVGDRGLFA
LYPKTNKNGFRSRLPVPWPRQGNPRTTQHPLAQLTRVWAVCKGWNWRLARASHRLASCLPPWAVHILASW
GLLKGERPSRIPRLLPRSQRRLGLSASRQLPPGTVAGRRSQTRRTLPPWR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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