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Report for CCDS52257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52257.1 Public Mus musculus 7 Mrgprb1 23 108 98 CCDS HistoryNCBI Gene:233231Re-query CCDS DB by CCDS ID:52257.1Re-query CCDS DB by GeneID:233231See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52257.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094384.3 ENSMUSP00000091946.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094384.3Link to Ensembl Protein Viewer:ENSMUSP00000091946.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000094384Re-query CCDS DB by Protein ID:ENSMUSP00000091946
Original member Current member NCBI NM_205810.4 NP_991379.3 Accepted alive Link to Nucleotide Sequence:NM_205810.4Link to Protein Sequence:NP_991379.3Re-query CCDS DB by Nucleotide ID:NM_205810Re-query CCDS DB by Protein ID:NP_991379Link to BLAST:NP_991379.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_991379.3 350 Q3UG61 350 100% 0 0

Chromosomal Locations for CCDS 52257.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 48447110 48448151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 48456197 48456207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGGAGCAAAGAACTGAGATTGCACCACTCCTGAAAATGGACTTAGTCATCCAAGACTGGACCATTAATA
TT
ACAGCACTGAAAGAAAGCAATGACAATGGAATATCATTTTGTGAAGTTGTGTCTCGTACCATGACTTT
T
CTTTCCCTCATCATTGCCTTAGTTGGGCTGGTTGGAAATGCCACAGTGTTATGGTTTCTGGGCTTCCAG
ATG
AGCAGGAATGCCTTCTCTGTCTACATCCTCAACCTTGCTGGTGCTGACTTTGTCTTCATGTGCTTTC
AA
ATTGTACATTGTTTTTATATTATCTTAGACATCTACTTCATCCCCACTAATTTTTTTTCATCTTACAC
T
ATGGTGTTAAACATTGCTTACCTTAGTGGTCTGAGCATCCTCACTGTCATTAGCACTGAACGCTTCCTA
TCT
GTCATGTGGCCCATCTGGTACCGCTGCCAACGCCCAAGGCACACATCAGCTGTCATATGTACTGTGC
TT
TGGGTCTTGTCCCTGGTGTTGAGCCTCCTGGAAGGAAAGGAATGTGGCTTCCTATATTACACTAGTGG
C
CCTGGTTTGTGTAAGACATTTGATTTAATCACTACTGCATGGTTAATTGTTTTATTTGTGGTTCTCTTG
GGA
TCCAGTCTGGCCTTGGTGCTTACCATCTTCTGTGGCTTACACAAGGTTCCTGTGACCAGGTTGTATG
TG
ACCATTGTGTTTACAGTGCTTGTCTTCCTGATCTTTGGTCTGCCCTATGGGATCTACTGGTTCCTCTT
A
GAGTGGATTAGGGAATTTCATGATAATAAACCTTGTGGTTTTCGTAACGTGACAATATTTCTGTCCTGT
ATT
AACAGCTGTGCCAACCCCATCATTTACTTCCTTGTTGGCTCCATTAGGCACCATCGGTTTCAACGGA
AG
ACTCTCAAGCTTCTTCTGCAGAGAGCCATGCAAGACTCTCCTGAGGAGGAAGAATGTGGAGAGATGGG
T
TCCTCAAGAAGACCTAGAGAAATAAAAACTGTCTGGAAGGGACTGAGAGCTGCTTTGATCAGGCATAAA
TAG


Translation (350 aa):
MEQRTEIAPLLKMDLVIQDWTINITALKESNDNGISFCEVVSRTMTFLSLIIALVGLVGNATVLWFLGFQ
M
SRNAFSVYILNLAGADFVFMCFQIVHCFYIILDIYFIPTNFFSSYTMVLNIAYLSGLSILTVISTERFL
S
VMWPIWYRCQRPRHTSAVICTVLWVLSLVLSLLEGKECGFLYYTSGPGLCKTFDLITTAWLIVLFVVLL
G
SSLALVLTIFCGLHKVPVTRLYVTIVFTVLVFLIFGLPYGIYWFLLEWIREFHDNKPCGFRNVTIFLSC
I
NSCANPIIYFLVGSIRHHRFQRKTLKLLLQRAMQDSPEEEECGEMGSSRRPREIKTVWKGLRAALIRHK




Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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