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Report for CCDS51991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51991.1 Public Mus musculus 7 Zfp954 23 108 98 CCDS HistoryNCBI Gene:232853Re-query CCDS DB by CCDS ID:51991.1Re-query CCDS DB by GeneID:232853See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51991.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056246.7 ENSMUSP00000072585.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056246.7Link to Ensembl Protein Viewer:ENSMUSP00000072585.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000056246Re-query CCDS DB by Protein ID:ENSMUSP00000072585
Original member Current member NCBI NM_172738.3 NP_766326.2 Accepted alive Link to Nucleotide Sequence:NM_172738.3Link to Protein Sequence:NP_766326.2Re-query CCDS DB by Nucleotide ID:NM_172738Re-query CCDS DB by Protein ID:NP_766326Link to BLAST:NP_766326.2

Chromosomal Locations for CCDS 51991.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 7115293 7116200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 7116613 7116711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 7117786 7117912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 7119372 7119410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 7121223 7121300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1251 nt):
ATGGCGACTTCCCAGGGCCCCACCATCCTCTGGAGCCCGATGGTGATTGTGGAGGCTGCGGGTGGAGCCC
TGCCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAACCAGGAAGAGGGCTGCGTGTCCTTTGAGGATGT
GGCTGTGTACTTCTCCTGGGAGGAATGGACACTGCTCGATGACTCTCAAAGGCTCCTGTACCAGACTGTG
ATGACGGAGATCTTCACACTGGTGTCTTCACTGAGACTTGAACTTTCTGGGATTCATGATTCAACTCAGG
TGGAATCTTGTGGAGATCTCTCTGTGCCTGCACTAAGATTCCTGACTCCGTGTTTATGGACAGGTTGTTG
GATCAAAGTGGAGAGTGAAACACCCCCCTTTAATCAAAGCCTGTCCACAGAAGGAGGTGTCAGTCCGTCC
ACACTGCAACAGCACATGCTGTGCTGTGCTGAGACACCCGTGCTAAGCACGGACAATGTGACGATCCTCC
AGACCTCCTCGGGCCTTCTCAGGCATCAGGTGACTTCCAGTGGTGGGGACACCCCCACGAACACTGAGAG
TGGAGAGGCCATTCAGAGTGAGAAGAAGAACTGCAAATGCACTTACTGTGGCAAGATCTTTACCAGTATA
TCCCACCTCAATCGGCACTGGAAGATACACACTGGGGAAAAGCCTTTTCAGTGCACCGAGTGTGGCAAGT
CCTTCAGCCAAAAAGCCTTTCTCATTAAGCATTTCAGAATGCACACCGGAGAGAAACCTTATAGGTGCAG
TGAGTGTGGCAAAGCCTTCAAGCATAATATCTCCCTTATTTCTCATCAGGGACTCCACACAGGAGAGATG
CCTTTTAAGTGCACTGAATGTGGGAAATCGTACAGGAGCAAAGAAGGCCTTAAGGTCCATTATCGATTTC
ATACTGGTGAAATGCCCTTTGAGTGTAGTGAATGTGGCAAATCGTACAGGAGCAGAGAGGGCCTTCTGAA
TCATTTCTACAGTCATACCGCGGAGAAGCCTTTCAGCTGCGGTGAATGTGGCATGTATTTCACCCAGAAC
TCCGAGCTCATTGAACATCTAACAGTTCACGGCAAGCCTTTCAAGTGCAACGAGTGTGGACGAGTCTTCA
ATTCCAGCTACAACTTCATTAGACACATGAAAGTGCACGTTGTAGCAAAGCAGTATGCGTGCAGGGAGTG
TGACAAGGTGTACTGCAGTAGCTCTAGCCTGTACAAACACCGGAAGATTCACGCTCGATAA

Translation (416 aa):
MATSQGPTILWSPMVIVEAAGGALPQVSQYSVKPANQEEGCVSFEDVAVYFSWEEWTLLDDSQRLLYQTV
MTEIFTLVSSLRLELSGIHDSTQVESCGDLSVPALRFLTPCLWTGCWIKVESETPPFNQSLSTEGGVSPS
TLQQHMLCCAETPVLSTDNVTILQTSSGLLRHQVTSSGGDTPTNTESGEAIQSEKKNCKCTYCGKIFTSI
SHLNRHWKIHTGEKPFQCTECGKSFSQKAFLIKHFRMHTGEKPYRCSECGKAFKHNISLISHQGLHTGEM
PFKCTECGKSYRSKEGLKVHYRFHTGEMPFECSECGKSYRSREGLLNHFYSHTAEKPFSCGECGMYFTQN
SELIEHLTVHGKPFKCNECGRVFNSSYNFIRHMKVHVVAKQYACRECDKVYCSSSSLYKHRKIHAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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