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Report for CCDS51723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51723.1 Public Mus musculus 6 Bmt2 23 108 98 CCDS HistoryNCBI Gene:101148Re-query CCDS DB by CCDS ID:51723.1Re-query CCDS DB by GeneID:101148See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51723.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045235.7 ENSMUSP00000040578.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045235.7Link to Ensembl Protein Viewer:ENSMUSP00000040578.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000045235Re-query CCDS DB by Protein ID:ENSMUSP00000040578
Original member Current member NCBI NM_175312.4 NP_780521.2 Accepted alive Link to Nucleotide Sequence:NM_175312.4Link to Protein Sequence:NP_780521.2Re-query CCDS DB by Nucleotide ID:NM_175312Re-query CCDS DB by Protein ID:NP_780521Link to BLAST:NP_780521.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780521.2 403 Q8BXK4 403 100% 0 0

Chromosomal Locations for CCDS 51723.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 13628471 13629100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13630590 13630704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13641687 13641857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13663202 13663343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13677680 13677833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGGAGCCGGGGCCGGGTGGCCGAGGCGCAGCGCGCGGACAGCGGCCCCCGAACGCCGCGCAGCCCCGGG
AGCAGGAGCGGAAGCTGGAGCAGGAGAAGCTGTCCGGGGTGGTGAAGAGCGTTCATCGGCGGCTCCGCAA
GAAGTACCGCGAAGTGGGAGACTTTGATAAGATCTGGCGAGAACACTGTGAAGATGCGGAAACACTTTGC
GAATATGCTGTTGCAATGAAAAATCTGGCAGATAATCACTGGGCAAAAACTTGTGAGGGTGAAGGTCGCA
TTGAATGGTGTTGTAGTGTATGCAGAGAGTACTTCCAAAATGGTGGGAAAAGAAAAGCACTTGAGAAAGA
TGAAAAACGAGCTGTCCTCGCCACTAAGACCACTCCAGCCTTAAACGTGCACGAGTCTTCTAAACTTGAA
GGTCCTTTAACAAACCTCAGCTTTACAAGCCCTGACTTTATAACTGAGTTGCTTCAAGCCTCAGGAAAGA
TCAGATTACTTGATGTTGGCAGCTGCTTTAATCCATTTTTGAAGTTTGAAGAATTTTTAACTGTTGGCAT
AGATATTGTACCTGCTGTAGAGAGTGTGTATAAGTGTGACTTCCTGAACCTGCAGCTGCAGCAGCCACTC
CAGCTTGCACAAGATGCTATAGATGCTTTTCTGAAGCAGCTGAGAAATCCTATTGATGCTCTTCCGGGGG
AACTTTTTCATGTGGTTGTCTTCTCTCTCCTTCTTTCCTATTTTCCATCACCCTACCAGCGATGGATTTG
CTGCAAGAAAGCCCATGAGCTGTTAGTCCTGAACGGCTTATTGCTCATCATCACTCCCGATTCCTCCCAT
CAGAACCGGCACGCTATGATGATGAAGAGCTGGAAGATTGCTATAGAATCCCTGGGTTTTAAGCGCTTCA
AGTATTCAAAATTTTCTCATATGCATCTCATGGCTTTTAGAAAAACCTCCCTTAAAACCACAAGTGACTT
GGTTAGCAGGAACTATCCAGGGATGTTGTATATTCCTCAAGATTTCAACAGTGTAGAAGAGGAGGAGTAT
TCTAACACTTCCTGCTATGTCCGATCAGATCTAGAAGATGAACAACTCGCATACGGTTTCACGGAGCTCC
CCGAAGCTCCTTATGATTCCGATTCTGGAGAAAGCCAAGCCAGCTCTATTCCATTTTATGAGTTAGAGGA
TCCCATCTTACTTTTAAGCTAA

Translation (403 aa):
MEPGPGGRGAARGQRPPNAAQPREQERKLEQEKLSGVVKSVHRRLRKKYREVGDFDKIWREHCEDAETLC
EYAVAMKNLADNHWAKTCEGEGRIEWCCSVCREYFQNGGKRKALEKDEKRAVLATKTTPALNVHESSKLE
GPLTNLSFTSPDFITELLQASGKIRLLDVGSCFNPFLKFEEFLTVGIDIVPAVESVYKCDFLNLQLQQPL
QLAQDAIDAFLKQLRNPIDALPGELFHVVVFSLLLSYFPSPYQRWICCKKAHELLVLNGLLLIITPDSSH
QNRHAMMMKSWKIAIESLGFKRFKYSKFSHMHLMAFRKTSLKTTSDLVSRNYPGMLYIPQDFNSVEEEEY
SNTSCYVRSDLEDEQLAYGFTELPEAPYDSDSGESQASSIPFYELEDPILLLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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