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Report for CCDS51481.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51481.1 Public Mus musculus 5 Crmp1 23 108 98 CCDS HistoryNCBI Gene:12933Re-query CCDS DB by CCDS ID:51481.1Re-query CCDS DB by GeneID:12933See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51481.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114158.8 ENSMUSP00000109795.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114158.8Link to Ensembl Protein Viewer:ENSMUSP00000109795.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000114158Re-query CCDS DB by Protein ID:ENSMUSP00000109795
Original member Current member NCBI NM_001136058.2 NP_001129530.1 Accepted alive Link to Nucleotide Sequence:NM_001136058.2Link to Protein Sequence:NP_001129530.1Re-query CCDS DB by Nucleotide ID:NM_001136058Re-query CCDS DB by Protein ID:NP_001129530Link to BLAST:NP_001129530.1

Chromosomal Locations for CCDS 51481.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 37242145 37242525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37265232 37265320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37268683 37268867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37273347 37273511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37276277 37276338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37278085 37278165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37278863 37278931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37279659 37279779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37280467 37280623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37282852 37282993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37284028 37284198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37286368 37286547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37288805 37288970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37291117 37291208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2061 nt):
ATGGCGGAGCGGCGGCGCGCGTGGAACACGGAGGACGACCTGCCGGTGTACCTGGCGCGGCCAGGCAGCG
CGGCGCAGACCCCGCGCCAGAAGTACGGCGGCATGTTCGCCGCCGTGGAGGGCGCCTACGAGAACAAGAC
CATCGACTTCGACGCCTACAGCGTGGGCCGCCGCGGCTCCGCGCGCACACCACGCAGCGCTGGCCGGCCC
GACGCCGTGGGCCTGCCGTGCCCCGGCGGCAGCGAAGACACGGCCAGTGATGTGAGCGAGCCCTCGGGCT
CTGCTGTCAGTTCGCCAGGCGATCGCGATGACAGACCGCCAGCGTTGCGCATCCGATGTCCTGCGCCCCG
CGACCTGCCACTCGGCCGGGACAATGGCCAGAGTGACCGGCTCCTCATCAGAGGTGGACGCATCATCAAT
GATGACCAGTCCTTCTACGCCGATGTCTACCTAGAAGATGGACTCATAAAACAAATAGGAGAGAACCTGA
TTGTTCCTGGTGGAGTGAAGACCATCGAGGCGAATGGCCGAATGGTCATTCCCGGTGGCATTGATGTCAA
CACTTACCTGCAGAAGCCCTCCCAGGGCATGACCTCGGCTGATGACTTCTTCCAGGGCACTAAAGCAGCG
CTGGCAGGTGGAACCACGATGATCATTGACCACGTTGTTCCTGAACCTGGGTCCAGCTTGTTGACTTCCT
TTGAGAAATGGCACGAAGCAGCAGACACCAAATCCTGCTGTGACTATTCCCTCCACGTGGACATCACAAG
CTGGTATGATGGTGTTCGGGAAGAGCTGGAGGTGCTGGTGCAGGACAAAGGTGTCAACTCCTTCCAAGTC
TACATGGCGTATAAGGACCTGTACCAGATGTCTGACAGCCAGCTGTATGAAGCCTTCACCTTCCTTAAGG
GTTTGGGAGCTGTGATCTTAGTCCATGCAGAAAATGGAGATTTGATAGCTCAGGAACAAAAACGGATCCT
GGAGATGGGCATCACGGGTCCCGAGGGTCATGCTCTGAGCAGACCCGAGGAGCTGGAGGCCGAGGCTGTG
TTCCGGGCTATTGCCATTGCAGGCCGGATCAATTGCCCTGTGTACATCACCAAGGTCATGAGCAAGAGTG
CAGCGGACATCATCGCACTGGCCAGGAAGAAAGGCCCTCTTGTCTTCGGTGAGCCCATAGCCGCCAGCCT
GGGAACCGATGGCACCCACTACTGGAGCAAGAACTGGGCCAAGGCAGCTGCATTTGTGACTTCCCCTCCC
CTGAGCCCAGACCCCACCACTCCTGACTACTTGACCTCCTTGCTGGCCTGTGGAGACTTGCAGGTCACAG
GTAGTGGCCACTGTCCCTACAGTACTGCTCAGAAGGCTGTGGGCAAGGACAACTTCACTCTGATCCCTGA
GGGTGTCAATGGTATAGAAGAGCGGATGACCGTTGTCTGGGACAAGGCAGTGGCTACTGGCAAGATGGAT
GAGAACCAGTTTGTAGCCGTCACCAGCACCAACGCAGCCAAGATCTTCAACCTGTACCCGAGGAAAGGTC
GGATCGCTGTGGGCTCCGATGCTGACGTAGTCATCTGGGACCCAGATAAGATGAAGACCATAACAGCCAA
AAGCCATAAATCAACTGTGGAGTACAACATCTTTGAGGGCATGGAGTGCCACGGCTCCCCCCTGGTGGTC
ATCAGTCAGGGCAAGATTGTCTTTGAGGATGGAAACATCAGTGTCAGCAAGGGCATGGGCCGCTTCATCC
CTCGGAAGCCATTCCCAGAGCATCTCTACCAGCGTGTCAGGATCAGAAGCAAGGTTTTCGGGTTGCATAG
TGTTTCCAGGGGCATGTACGATGGGCCTGTGTACGAGGTGCCAGCTACACCCAAACATGCTGCTCCTGCT
CCTTCTGCCAAATCCTCGCCTTCTAAACACCAACCCCCACCCATCCGGAACCTCCACCAGTCCAACTTCA
GCTTATCAGGTGCCCAGATAGATGACAACAATCCAAGGCGTACAGGCCACCGCATTGTGGCGCCCCCTGG
TGGCCGCTCCAACATCACCAGCCTCGGTTGA

Translation (686 aa):
MAERRRAWNTEDDLPVYLARPGSAAQTPRQKYGGMFAAVEGAYENKTIDFDAYSVGRRGSARTPRSAGRP
DAVGLPCPGGSEDTASDVSEPSGSAVSSPGDRDDRPPALRIRCPAPRDLPLGRDNGQSDRLLIRGGRIIN
DDQSFYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVNTYLQKPSQGMTSADDFFQGTKAA
LAGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQV
YMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAV
FRAIAIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPP
LSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMD
ENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNISVSKGMGRFIPRKPFPEHLYQRVRIRSKVFGLHSVSRGMYDGPVYEVPATPKHAAPA
PSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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