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Report for CCDS51366.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51366.1 Public Mus musculus 4 Aadacl4fm1 23 108 98 CCDS HistoryNCBI Gene:381572Re-query CCDS DB by CCDS ID:51366.1Re-query CCDS DB by GeneID:381572See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51366.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030328.2 ENSMUSP00000030328.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030328.2Link to Ensembl Protein Viewer:ENSMUSP00000030328.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000030328Re-query CCDS DB by Protein ID:ENSMUSP00000030328
Original member Current member NCBI NM_198662.3 NP_941064.2 Accepted alive Link to Nucleotide Sequence:NM_198662.3Link to Protein Sequence:NP_941064.2Re-query CCDS DB by Nucleotide ID:NM_198662Re-query CCDS DB by Protein ID:NP_941064Link to BLAST:NP_941064.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941064.2 407 Q8BM81 407 100% 0 0

Chromosomal Locations for CCDS 51366.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 144519886 144520053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144522233 144522449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144523643 144523706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144528461 144529235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGCTTTACTTGGTGGGATTTCTTCTTGCGACCGTGTGTCTCCTGGTCCTGGGAGTCAACGTGTGGGTTC
TCATAGACCACTTCCTTACGATTGATGTGCCTCCTTCCATTCCACACCCTGTGAAGTTTCGGATTCTACA
CTTCTGCTTTCATCTGACAACCACATGGGGGCATATACTCGAGAAGATGAACATTTGCTCCATGCCTCAA
TTTTTCTGCTTTTTACAAGACAGCCTTTCATCAAAGGAGAACCATGGTGTGTTTGTGAAGGACCTGCGTT
TTGGCACAATCCCTGTAAGACTCTTTCGTCCCAAGGCAGCCTCCTCCAAACCCCGACGAGGCATCCTCTT
TTTCCATGGAGGAGGAGCAATGATTGGCAGCTTGGACTCTCACCACAACCTGTGTACCTTCCTGGCTCGA
GAGACAGACTCAGTGTTGGTGTCAGTGGGGTACCGAAAGCTTCCTTATTACCACCATCCTTCTCTATACC
ATGACTGCATAAATGCCTCCATTCACTTCCTGAAGTCTCTGAAAGCCTATGGGATAGACCCCTCCCGGGT
CGTGATCTGTGGAGAGAGCATTGGAGGTGCAGCTGCAGTTGTTGTCACTCAGACCTTGTTGAGTAGAACA
GATATCCCCAAGATCCGGGCTCAGGTCCTGATTTATCCAATTCTGCAGGCATTTTATTTCCAGTCCCCAT
CACATCTGATGCACAAAAATATCCCATTCCTAACCAAGGATTTCATGATTACTTGTATTTGTAAATATCT
GGCCATTGATTTCTCCTGGAAAGATGCCATGTTGACAGGTGCCTGTATATCTCCAAGTGCCTGGAAGAAG
TATGAGAAATGGCTAAGCCCTGACAACATCCCTAAAAGGTTCAGGACTACATACCAGCCACCTGAGTCAC
CTGCACCTTTTAATGAGGCTGCTTATCTAGAAACCAAACATGCCATGAATATAGACATTTCTCCCCTCGT
AGCAGATGATAAAATCATTGCTCAGCTTCCTGAGGCATTCTTAGTGAGCCTTCACTGGGACATTATCCGT
GATGATGTCTTGCTCTATAAGAAGCGCTTGGAAGACCAGGGGGTTCCTGTGACCTGGCATCATGTGGAGG
ATGGCTTTCATGGATGCATACTGTTGTTTGACAAGAAGCTTTTCTCATTCCCCTGTTCCTTGAACATAGT
GAATGCTGTAGTGAGTTATATAAAGGACTTATGA

Translation (407 aa):
MLYLVGFLLATVCLLVLGVNVWVLIDHFLTIDVPPSIPHPVKFRILHFCFHLTTTWGHILEKMNICSMPQ
FFCFLQDSLSSKENHGVFVKDLRFGTIPVRLFRPKAASSKPRRGILFFHGGGAMIGSLDSHHNLCTFLAR
ETDSVLVSVGYRKLPYYHHPSLYHDCINASIHFLKSLKAYGIDPSRVVICGESIGGAAAVVVTQTLLSRT
DIPKIRAQVLIYPILQAFYFQSPSHLMHKNIPFLTKDFMITCICKYLAIDFSWKDAMLTGACISPSAWKK
YEKWLSPDNIPKRFRTTYQPPESPAPFNEAAYLETKHAMNIDISPLVADDKIIAQLPEAFLVSLHWDIIR
DDVLLYKKRLEDQGVPVTWHHVEDGFHGCILLFDKKLFSFPCSLNIVNAVVSYIKDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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