CCDS Report for Consensus CDS

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Report for CCDS5069.2 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
5069.2	Public	Homo sapiens	6	ARMC2	24	110	108

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 5069.2

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000392644.9	ENSP00000376417.4	MANE Select	Accepted	alive
		NCBI	NM_032131.6	NP_115507.4	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_115507.4	867	Q8NEN0-1	867	100%	0	0

Chromosomal Locations for CCDS 5069.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)

Genome Browser links:

Chromosome	Start	Stop
6	108854268	108854485
6	108858199	108858271
6	108868824	108868995
6	108876143	108876350
6	108894467	108894543
6	108899694	108899792
6	108904230	108904405
6	108910899	108911001
6	108912335	108912558
6	108928088	108928233
6	108936900	108936999
6	108953033	108953351
6	108961572	108961694
6	108962014	108962127
6	108964180	108964312
6	108964980	108965140
6	108973357	108973514

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2604 nt):
ATGCTGTCTCCAAATGATAAAATGTTAGGAAAACTGGATCCATTTTATCAACCTTCAGTGTCCAAGCAGA AGACCAGTGCAGAAATCATAAGTGAAGCAAGAAATGCATTAAGAACAGTTAGAACCCAAAGACCATTTAC ACCACAGGAGGCTCAAAGAAAACTATTCGGACCTGCATCCTCAAGAACATCAGAAAATAGACCTCCTTCC TCCTTCAGCCTCCATGCATCCAGTTTTGAGTCATCTGATTCCAGGCCTATCTCTGGCACACGTCTTAGTC CACTAGAGCTGAAACCGAAAGTTCCAGCATCTCCCACCAGAGAGGAGGATTCCTGCTTTTCCTTTCCTAA GCCCCCAGTGGACCCTGCGAAGATTAGAAGAGTAAGCAACGCCAGGGCTCGCTTATTCAGGGCTGCCTCC CAGCGGGCCCTTCTGCCGGACAGATCCCTTCCTCCCTCCGACTCAAAGAAGACAGTGGAATCCAAAGAAA CAGTTATGATGGGGGACTCTATGGTGAAAATAAATGGGATTTATTTAACAAAATCAAATGCTATTTGCCA CTTAAAGAGTCACCCACTTCAGCTAACTGATGATGGAGGCTTCAGTGAAATAAAGGAGCAAGAAATGTTC AAAGGAACAACATCTTTACCATCTCATCTCAAGAATGGAGGGGACCAGGGGAAGAGACATGCGAGGGCCT CATCATGCCCCAGTAGCTCAGACCTGAGCAGGCTGCAAACCAAAGCAGTCCCAAAAGCTGACCTGCAAGA AGAGGACGCAGAAATAGAAGTAGACGAAGTCTTTTGGAATACAAGGATTGTACCGATTTTGCGTGAATTA GAAAAGGAAGAAAACATTGAAACGGTTTGTGCTGCTTGCACACAACTTCATCATGCTTTAGAGGAAGGAA ACATGCTTGGAAATAAATTTAAGGGAAGAAGTATTCTCCTGAAGACCCTGTGTAAACTAGTTGATGTTGG TTCAGACTCGCTCAGCCTTAAACTTGCAAAAATAATTCTAGCACTTAAAGTGAGTAGAAAGAATCTTCTT AATGTCTGCAAACTTATATTTAAAATTAGCAGGAATGAGAAGAATGATTCTTTGATTCAAAATGACAGCA TTCTGGAATCATTATTGGAGGTACTAAGAAGTGAAGACCTGCAAACTAACATGGAAGCTTTTTTATACTG TATGGGGTCTATAAAGTTCATTTCTGGAAATCTGGGATTTCTTAATGAAATGATCAGCAAAGGTGCTGTG GAAATACTGATAAATTTGATAAAACAAATAAATGAGAACATCAAGAAATGTGGTACATTTTTGCCTAATT CGGGCCACTTGCTAGTCCAGGTGACTGCTACATTGAGAAACTTGGTTGATTCATCATTAGTAAGAAGTAA GTTCCTAAACATCAGTGCCCTTCCCCAGCTCTGCACGGCAATGGAACAGTACAAGGGTGACAAGGACGTC TGTACCAATATTGCCAGAATATTCAGCAAACTTACTTCTTACCGTGACTGCTGCACAGCCTTGGCCAGCT ATTCCAGATGTTATGCCTTATTTCTGAATCTAATTAACAAATACCAGAAGAAGCAGGATTTAGTCGTCCG TGTTGTTTTTATTCTTGGCAACCTGACGGCAAAAAATAACCAGGCTCGTGAACAATTTTCCAAAGAGAAA GGGAGCATCCAAACTCTGCTGTCATTATTCCAGACGTTCCATCAGCTGGATCTGCATTCCCAGAAGCCGG TGGGCCAACGAGGCGAGCAGCACAGGGCGCAGAGGCCGCCGTCAGAGGCAGAGGACGTGCTCATCAAGCT GACTCGTGTGCTGGCCAACATTGCCATCCACCCGGGCGTGGGCCCGGTGCTGGCCGCCAACCCGGGGATA GTGGGCCTGCTCCTGACCACGCTGGAATACAAGTCACTTGATGATTGTGAGGAGCTGGTGATCAATGCTA CAGCGACAATCAACAATTTATCTTACTACCAAGTGAAGAATTCCATAATTCAAGACAAAAAGCTATATAT TGCTGAATTGCTCTTAAAGCTTCTTGTCAGTAACAACATGGATGGAATCCTGGAGGCTGTGCGTGTTTTC GGAAATCTCTCCCAGGACCATGATGTCTGCGATTTCATTGTGCAGAACAATGTCCACAGGTTCATGATGG CGCTGCTGGATGCTCAGCATCAGGATATCTGCTTTTCTGCCTGTGGTGTTCTCCTCAATCTCACTGTGGA TAAAGACAAGCGTGTCATCTTGAAAGAAGGAGGTGGCATTAAAAAGTTAGTGGACTGTTTAAGAGATTTG GGTCCTACTGATTGGCAGCTGGCCTGCTTGGTTTGTAAAACTTTATGGAACTTCAGTGAAAACATCACTA ATGCTTCGTCATGTTTTGGAAATGAAGACACCAACACACTCTTACTCTTGCTCTCATCATTTTTAGATGA AGAACTAGCACTGGATGGCAGTTTTGATCCAGACCTAAAAAACTATCACAAACTCCATTGGGAAACAGAA TTCAAACCTGTGGCACAGCAGCTTCTAAACCGAATTCAGAGACATCACACCTTCCTGGAACCCCTGCCCA TTCCCTCTTTCTAA
Translation (867 aa):
MLSPNDKMLGKLDPFYQPSVSKQKTSAEIISEARNALRTVRTQRPFTPQEAQRKLFGPASSRTSENRPPS SFSLHASSFESSDSRPISGTRLSPLELKPKVPASPTREEDSCFSFPKPPVDPAKIRRVSNARARLFRAAS QRALLPDRSLPPSDSKKTVESKETVMMGDSMVKINGIYLTKSNAICHLKSHPLQLTDDGGFSEIKEQEMF KGTTSLPSHLKNGGDQGKRHARASSCPSSSDLSRLQTKAVPKADLQEEDAEIEVDEVFWNTRIVPILREL EKEENIETVCAACTQLHHALEEGNMLGNKFKGRSILLKTLCKLVDVGSDSLSLKLAKIILALKVSRKNLL NVCKLIFKISRNEKNDSLIQNDSILESLLEVLRSEDLQTNMEAFLYCMGSIKFISGNLGFLNEMISKGAV EILINLIKQINENIKKCGTFLPNSGHLLVQVTATLRNLVDSSLVRSKFLNISALPQLCTAMEQYKGDKDV CTNIARIFSKLTSYRDCCTALASYSRCYALFLNLINKYQKKQDLVVRVVFILGNLTAKNNQAREQFSKEK GSIQTLLSLFQTFHQLDLHSQKPVGQRGEQHRAQRPPSEAEDVLIKLTRVLANIAIHPGVGPVLAANPGI VGLLLTTLEYKSLDDCEELVINATATINNLSYYQVKNSIIQDKKLYIAELLLKLLVSNNMDGILEAVRVF GNLSQDHDVCDFIVQNNVHRFMMALLDAQHQDICFSACGVLLNLTVDKDKRVILKEGGGIKKLVDCLRDL GPTDWQLACLVCKTLWNFSENITNASSCFGNEDTNTLLLLLSSFLDEELALDGSFDPDLKNYHKLHWETE FKPVAQQLLNRIQRHHTFLEPLPIPSF

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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