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Report for CCDS50420.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50420.1 Public Mus musculus 19 Fas 23 108 98 CCDS HistoryNCBI Gene:14102Re-query CCDS DB by CCDS ID:50420.1Re-query CCDS DB by GeneID:14102See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50420.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112472.3 ENSMUSP00000108091.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112472.3Link to Ensembl Protein Viewer:ENSMUSP00000108091.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112472Re-query CCDS DB by Protein ID:ENSMUSP00000108091
Original member Current member NCBI NM_001146708.1 NP_001140180.1 Accepted alive Link to Nucleotide Sequence:NM_001146708.1Link to Protein Sequence:NP_001140180.1Re-query CCDS DB by Nucleotide ID:NM_001146708Re-query CCDS DB by Protein ID:NP_001140180Link to BLAST:NP_001140180.1

Chromosomal Locations for CCDS 50420.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 34290715 34290744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34307125 34307278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34309036 34309043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (192 nt):
ATGCTGTGGATCTGGGCTGTCCTGCCTCTGGTGCTTGCTGGCTCACAGTTAAGAGTTCATACTCAAGGTA
CTAATAGCATCTCCGAGAGTTTAAAGCTGAGGAGGCGGGTTCGTGAAACTGATAAAAACTGCTCAGAAGG
ATTATATCAAGGAGGCCCATTTTGCTGTCAACCATGCCAACCTGAAAACTAG

Translation (63 aa):
MLWIWAVLPLVLAGSQLRVHTQGTNSISESLKLRRRVRETDKNCSEGLYQGGPFCCQPCQPEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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