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Report for CCDS49678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49678.1 Public Mus musculus 15 4930407I10Rik 23 108 98 CCDS HistoryNCBI Gene:328573Re-query CCDS DB by CCDS ID:49678.1Re-query CCDS DB by GeneID:328573See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49678.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100396.3 ENSMUSP00000097965.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100396.3Link to Ensembl Protein Viewer:ENSMUSP00000097965.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000100396Re-query CCDS DB by Protein ID:ENSMUSP00000097965
Original member Current member NCBI NM_001166475.1 NP_001159947.1 Accepted alive Link to Nucleotide Sequence:NM_001166475.1Link to Protein Sequence:NP_001159947.1Re-query CCDS DB by Nucleotide ID:NM_001166475Re-query CCDS DB by Protein ID:NP_001159947Link to BLAST:NP_001159947.1

Chromosomal Locations for CCDS 49678.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82059189 82059398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82062114 82066442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4539 nt):
ATGTTGTTACCACTTCTGGGAGCCTGTGCTGTGATAGGTCCATTCCAGGGCCCTGAATGGGAGCCAGTGA
GGGGCCTCCTGTCCCAGGATCAAAGCTGCAAGGATCCCCGGTGCTGTGGCAATCTGCTTGTCTCCTGCCT
CTTTCTGATCTGGCAGATCCAACAGTATTGGCACCAGTTCTCCAGGACCAGAAAGAGGAATGTCACCAAG
GTGCCACCACAGAGATGGACAGTGTTGTCTGCCCCCCAGGACACTTTTGTTGGGATGATTCCTGAATTCT
TTACTCATGGAAAAAACAGGGGCCTGGATGTTCACATCCAACAGTGGATGCAGAAGCGGCGATGGGGATA
CCAGAAGACTGTCAGACAACAGTGGGACACTCAGTATCTGCTGTCTCTGCAGAAGCCATGTCAAGACCTG
CCTTGGGATGTCCATACCTCTACTGAGCCCATTTTTTGTACCTCTTCCTTTTCAAACACTTGTCTTCTCC
CTCAGGACAGTTCTTGGGAAGCATGGCAGTTACCCTGGTACCCCAGAGATAGCCAGGCCCACCCATCCCT
GGCTATATGCCAAAGAACGGAGCAGCTGCTGGATCCTTCTCATACGTTGGTGCCAGCAGAGCCTGTTAGC
CTGAGGTACACCTCCACAACTTTAGCCTTCTCTCTTCCAAACTTCCCTCCAGCTCAGAGTCCAAACGTCT
GCCTCAGAGAGTTTCTACCCAGTCCTCTTAACCAACAATTGGAAATGTCCACCAAGGAGTGCTTGGAGCA
CCCACAAGGTCCCTTAGGACCATGGAGTCAAACCAAGACAGTAGGCAGAGAATGCAGTGAAGCTACTCTG
CAATATCTAAACAAGAGAAAGAGCAGGAGGGAAGATGCTCAGGAGATACGAGCATCTAGAGCCTTCTGCC
CAATAGACTCTGGAGTGGAGGAGGAGGAACAGGCTAAAGCCCTGGGGTACAGAGACCAGAGGCAAGAAAG
AAGGGACACTGATGGCGAGATCTCAGTGTCAGAGTGGGAGAGGCAAACCCAGGTGAGGACTGCAGTGAGA
GAACAAACTGAGAAACTACAGAGGAAAGCCCAGAGGGAGCCTGGAGAGGAGAGCTCTTCTCCCCAGTCTC
ACATAGGAGAGAACCAAGAAGAGTTCAGATGTAAAACTGACATAGCAACTCAGATACCAGCGTGGGTCGA
CCAGGAGGATGCTGTGGAGACTCCAACACTGGGGAAGAATGAGAAAGAAGCCAGAGGGAAGGAAGAGGCT
GAGGTCGAGGCCCAAGGATTGGAAACTCAGGACTGGACGGGAAGTAAGGCTGCTGAGAATTCCCAAGGGC
TAAAGTGGGGGACACGAGACCAGTTTGGAGGCAATACTGGTACAGAAACTGAGGTGGAGGAAGGAAGGAA
CAAGGATCAGATCGGAAGTGGAGATGGTGTGAAAATCGAGACATCTGGAAGGGAGAATCCAGGAGAATTC
AAACAACAGGACAATGAAAAGACCCAGGCCCTGGGGTGGGAGAAACAGAGATGCATTAGAACTGAGAATG
ACGTCCAGACTCCAGCTGGGGAGCGTGGAGGACAGAGCAGCAGTGAGAACGACTGGAAGATCCAAGCATC
TAAGGGAGAGAACCAGAATCTGTCAAGACAGGAAGTTGAACTGGGCTTGAAGAAGCTCAGAGAGGTAAGA
GAAGAGGACTGGGTGGTGATCCAGGCGCCATGCTGGGGCAGCCAGAGTCTCAGGCTGATCGCAGTGAAAA
GAGGACCATGCTGCAGAGACCAGAGCCAGGTCAGAGGAGAATATACTGTAGACATCTCGACACTGGAAAG
TGACCAAAGAGAGGGTGGAGATGCTGATGCAGCAAACCAGGTGACACCCGAGGCAGAGGAGCAGGCTCGA
TCCAGTGAACCTGACATGGAGACTTGCATAGTACCGAGCCAGGATGAGGAAAAGACTGAAGAGGAAAATG
GAATGTATGCTCTGGCACAAGGGAAGAGAAACCTGAGAGGGGCTAACGGCACAGATGGAGCACAGACCCA
GAAACTTGGGGAAGAAAACCAGGGTCAGTTAGGAAATGAATCCCATAAAATGATTCACGGACCAAAACGG
AAGAATCAGAAACAGGTTAGAGGCAACGATCATATAAATAACCAGACATCTGAGACAGGGAACTGGGCGG
AGCTAACAAGCAAGAAAGGTGATATGACCCACGGGACAGGGTACGAGGAAGCTGAGGAGGCTGAGGGTGA
GGACGGCACAGAAGGAATGAGAATCGTGAGAGGAGCCGGAGGGGAGGAAGGTACAGAGACCAAGGCAGCC
GTGGAAGAAAGCCAGAGCCCGTTAGGTGATGTGGGTACAAACACCCATTCATCCGAATTAGAGAACCAGA
AGGAGATGGGCAGCGAGGATGCAACAGAAGCTCGGGCCCCGGAGCAGAGAAACAAGACAGAACCCGGAAA
TAATGACATAAAGACCCAGAGACCTGAGAGCGAGAGCCAGGGACAGCTGGCTGAAGCTGGAGGGATCGGG
GAACAGGCTAAAGGCGAGAGCACTTCAGGAAATGGGGCAGCGGAGAAGAAAAACTGGGGAGAGGGTGCAG
GAGAGGATTGTAGAAAGCTGCAGCGGCCCAGGAGAAAGGATCAGAGACTAAGGTTAGGTGAAGTTGATGG
AAAGACCTACCAGTTAGAGTGGAAGAATCAGGAGAACTTTAGAGATGGGAATGATGCCGACATTCAAAAA
CAAGGGAAGAGAAACCCACTATGTTTCACGGGAGACGATGGCTCAGACACCCGAGCCTCTGTGGGAGAGG
ACCAAAGACAGTCTGTGTGTGAAACGGATGAAAAGAGTCAGACACCGGGGCAAAGAAACCAGGGCAAGCG
TAGAGACACTGCTACAGAAATCCAGGATGTCGGGGTCCAGAGAAAACGCAGAGCTGAGGGCTCTAAACTG
TCTCATCCATCGGGGAGAGGAGACAAGGGCCGGGTTGGCAGGAAGGATGCTGTCAGGCCCAGTCCCCCAA
ATGACTCTTCTGGGAAAGTGGGGCCCACAAGGCAGAAGTGCAGCTCGGCTCAGCTGGCTTCTCTCACTTC
CGGATATGGAACCCCCGGACACAAGCAACCAATGGCTGGAAATGGTGTCGACTCTGCTCCCGGTTCTGAA
GAACATCTAAGTTGCCAGGGCAGAGCTGCTGCCTGGAAGCACAGGCGTGAAGTCAGTGAAAGAACCCAGA
AGGCCCAACCTGGATCTCAAAGAAGACAAGAAAGGGACAAAAGGGTGGACCTAGGGAAGGCTTCCAGCCC
GACCTGTCAGGACCCCTATCCACAGTCTCAGGCATCCTCTGTCTTTCCCTCTCTCCTCTGTCCCCAAGTC
TCTCAAGCTGCCCCAGCTGTACCATGCGTACCAGTAGCTCTCAAAACCCTTCACAAATGGCCAGCTCTCA
AGAAGAGCAAGCATCTGCTCCTGGAATCGCTCATGAAGAGGAGGATTGCACATCTGAGGTGGGGCCTCCC
TCGACGCATCCTGGAGTCGTACTTGCTTTTTCACTTTTTAGAATCTTGCTCCTTGCCGCCGGCTGGAGGG
AGGCTGCCTGGATCACGCACGAACCGGGAACGCCAAAGGCATCAGGAACGACATTGTGAGTCTCAGGCAT
CCCTGTTAGGTCTTGAGTCTCCAGTCGGGACTCAAAGCCGTCCAGTTCTTGAAAAAAAAAGTTCGAAACT
TTGTACCCAAGTCCAGGCTGTAGAGAAGCGTAGACCAACCAAGCCTGAGCCAACGGGCAGCTCTATTCCA
CCTAAGAAACCCAGGAGAATAAGACCACCAGGGGGAGCAAGAGAACCACAGATCCAGGAAGAGGCCCCTA
AGGCCAAGATCCCTGCTCCCAAGATTCCTAGGCCAGCGGTAGAGCCTAGGAGCTGGCACAACCCAGGAGG
AGTCCCAGAGTTTTCCATTGAGAACAGCAGAAGCAGAGAAATGGTTAGGTCTGGAGTCTCCCATGTAGAA
GAGAAGACTTCCAGCAGAGCGAAGGCCTCATCTAGTCCAGGAGGCTGCAACCACCTGAAAAAGGAACGCG
TACCAAGGGAAGCCTCCGGGCTCCCCGCAAACAAGTATCTGCACCCCACGGGCGGAAAAAGTGGAAGTGT
GAGACCCTCAGAGGACAGAAAACGAGCCAGCTCTGCACATACATCCAGCTTGAAAGGGAGTATCCACTCC
GCGGCAGCCAGACTGAGCATGACCGTCTGGAGCAAGATGGCTTGGTCGACACAGCTGGCTAAGCCCCAGC
ACTCAACCCCCTTTCTCACCCCGAGGAATCCTACCCCACTTAACAAAGTGGGGGCTCCACATACAGACGT
GAACTGCAGCCGATTCCCCACTGCTTTAGAGAAGGACCTGGGGCCACCAGGAGTAACTGTTTCTAGGATA
GAGAGCTACCAGGAACATGAGACCCCTGGAAACTCAATGGGGACACCCCACAATCCAGCCATCTCACAAA
AGTTTGGTTTTATGAGGCACTTGAGATATTTTCTCAGACAGTATGGCCTTAAAAAGTAG

Translation (1512 aa):
MLLPLLGACAVIGPFQGPEWEPVRGLLSQDQSCKDPRCCGNLLVSCLFLIWQIQQYWHQFSRTRKRNVTK
VPPQRWTVLSAPQDTFVGMIPEFFTHGKNRGLDVHIQQWMQKRRWGYQKTVRQQWDTQYLLSLQKPCQDL
PWDVHTSTEPIFCTSSFSNTCLLPQDSSWEAWQLPWYPRDSQAHPSLAICQRTEQLLDPSHTLVPAEPVS
LRYTSTTLAFSLPNFPPAQSPNVCLREFLPSPLNQQLEMSTKECLEHPQGPLGPWSQTKTVGRECSEATL
QYLNKRKSRREDAQEIRASRAFCPIDSGVEEEEQAKALGYRDQRQERRDTDGEISVSEWERQTQVRTAVR
EQTEKLQRKAQREPGEESSSPQSHIGENQEEFRCKTDIATQIPAWVDQEDAVETPTLGKNEKEARGKEEA
EVEAQGLETQDWTGSKAAENSQGLKWGTRDQFGGNTGTETEVEEGRNKDQIGSGDGVKIETSGRENPGEF
KQQDNEKTQALGWEKQRCIRTENDVQTPAGERGGQSSSENDWKIQASKGENQNLSRQEVELGLKKLREVR
EEDWVVIQAPCWGSQSLRLIAVKRGPCCRDQSQVRGEYTVDISTLESDQREGGDADAANQVTPEAEEQAR
SSEPDMETCIVPSQDEEKTEEENGMYALAQGKRNLRGANGTDGAQTQKLGEENQGQLGNESHKMIHGPKR
KNQKQVRGNDHINNQTSETGNWAELTSKKGDMTHGTGYEEAEEAEGEDGTEGMRIVRGAGGEEGTETKAA
VEESQSPLGDVGTNTHSSELENQKEMGSEDATEARAPEQRNKTEPGNNDIKTQRPESESQGQLAEAGGIG
EQAKGESTSGNGAAEKKNWGEGAGEDCRKLQRPRRKDQRLRLGEVDGKTYQLEWKNQENFRDGNDADIQK
QGKRNPLCFTGDDGSDTRASVGEDQRQSVCETDEKSQTPGQRNQGKRRDTATEIQDVGVQRKRRAEGSKL
SHPSGRGDKGRVGRKDAVRPSPPNDSSGKVGPTRQKCSSAQLASLTSGYGTPGHKQPMAGNGVDSAPGSE
EHLSCQGRAAAWKHRREVSERTQKAQPGSQRRQERDKRVDLGKASSPTCQDPYPQSQASSVFPSLLCPQV
SQAAPAVPCVPVALKTLHKWPALKKSKHLLLESLMKRRIAHLRWGLPRRILESYLLFHFLESCSLPPAGG
RLPGSRTNRERQRHQERHCESQASLLGLESPVGTQSRPVLEKKSSKLCTQVQAVEKRRPTKPEPTGSSIP
PKKPRRIRPPGGAREPQIQEEAPKAKIPAPKIPRPAVEPRSWHNPGGVPEFSIENSRSREMVRSGVSHVE
EKTSSRAKASSSPGGCNHLKKERVPREASGLPANKYLHPTGGKSGSVRPSEDRKRASSAHTSSLKGSIHS
AAARLSMTVWSKMAWSTQLAKPQHSTPFLTPRNPTPLNKVGAPHTDVNCSRFPTALEKDLGPPGVTVSRI
ESYQEHETPGNSMGTPHNPAISQKFGFMRHLRYFLRQYGLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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