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Report for CCDS49160.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49160.1 Public Mus musculus 12 Bdkrb2 23 108 98 CCDS HistoryNCBI Gene:12062Re-query CCDS DB by CCDS ID:49160.1Re-query CCDS DB by GeneID:12062See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49160.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001652.6 ENSMUSP00000001652.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001652.6Link to Ensembl Protein Viewer:ENSMUSP00000001652.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000001652Re-query CCDS DB by Protein ID:ENSMUSP00000001652
Original member Current member NCBI NM_009747.2 NP_033877.3 Accepted alive Link to Nucleotide Sequence:NM_009747.2Link to Protein Sequence:NP_033877.3Re-query CCDS DB by Nucleotide ID:NM_009747Re-query CCDS DB by Protein ID:NP_033877Link to BLAST:NP_033877.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033877.3 392 P32299-1 392 100% 0 0

Chromosomal Locations for CCDS 49160.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 105588230 105588300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105591573 105592680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1179 nt):
ATGCCCTGCTCCTGGAAGCTACTCGGGTTTCTGTCGGTGCATGAGCCCATGCCCACCGCGGCCTCCTTTG
GCATCGAAATGTTCAACGTCACCACACAAGTCCTCGGGTCTGCTCTTAACGGGACCCTTTCGAAGGACAA
CTGCCCAGACACCGAGTGGTGGAGTTGGCTCAATGCCATCCAGGCCCCCTTCCTCTGGGTCCTCTTCCTG
CTGGCCGCACTGGAGAACCTCTTTGTCCTCAGCGTGTTCTTCCTGCACAAAAACAGCTGCACTGTGGCCG
AGATCTACCTGGGCAACCTGGCAGCGGCGGACCTCATCCTGGCCTGCGGGTTACCTTTCTGGGCCATCAC
CATCGCCAATAACTTTGACTGGGTGTTTGGAGAGGTGTTGTGCCGGGTGGTGAACACCATGATCTACATG
AACCTGTACAGCAGCATCTGCTTCCTGATGCTCGTGAGTATCGACCGCTACCTGGCGCTGGTGAAGACCA
TGTCCATGGGCCGGATGCGCGGGGTGCGCTGGGCCAAACTCTACAGCCTGGTGATCTGGGGCTGTACACT
GCTTCTGAGTTCACCCATGTTGGTGTTCAGGACCATGAGGGAATACAGCGAAGAGGGCCACAATGTCACC
GCCTGCGTCATCGTCTACCCGTCCCGTTCCTGGGAGGTGTTCACCAACGTGCTGCTGAACCTGGTGGGTT
TCCTCCTGCCCCTGAGCGTCATCACCTTCTGCACGGTGCGCATCTTGCAGGTGCTGAGGAACAACGAGAT
GAAGAAGTTCAAGGAGGTCCAGACGGAGAGGAAGGCCACCGTGCTAGTGCTGGCCGTCCTGGGGCTCTTT
GTGCTGTGTTGGGTGCCTTTCCAGATCAGCACCTTCCTGGACACGCTGCTGCGCCTCGGCGTGCTGTCCG
GATGCTGGGACGAGCACGCCGTAGACGTCATCACGCAGATCAGTTCCTACGTGGCCTACAGCAACAGCGG
CCTCAACCCACTGGTGTACGTGATCGTGGGCAAGCGCTTCCGGAAGAAGTCCCGAGAGGTGTACCGGGTG
CTGTGCCAGAAAGGAGGCTGCATGGGAGAACCCGTCCAGATGGAGAACTCCATGGGGACTTTGAGAACCT
CGATCTCCGTGGAACGGCAGATCCACAAGCTGCAGGACTGGGCAGGGAAGAAACAGTGA

Translation (392 aa):
MPCSWKLLGFLSVHEPMPTAASFGIEMFNVTTQVLGSALNGTLSKDNCPDTEWWSWLNAIQAPFLWVLFL
LAALENLFVLSVFFLHKNSCTVAEIYLGNLAAADLILACGLPFWAITIANNFDWVFGEVLCRVVNTMIYM
NLYSSICFLMLVSIDRYLALVKTMSMGRMRGVRWAKLYSLVIWGCTLLLSSPMLVFRTMREYSEEGHNVT
ACVIVYPSRSWEVFTNVLLNLVGFLLPLSVITFCTVRILQVLRNNEMKKFKEVQTERKATVLVLAVLGLF
VLCWVPFQISTFLDTLLRLGVLSGCWDEHAVDVITQISSYVAYSNSGLNPLVYVIVGKRFRKKSREVYRV
LCQKGGCMGEPVQMENSMGTLRTSISVERQIHKLQDWAGKKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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