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Report for CCDS4895.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4895.2 Public Homo sapiens 6 ZNF318 24 110 108 CCDS HistoryNCBI Gene:24149Re-query CCDS DB by CCDS ID:4895.2Re-query CCDS DB by GeneID:24149See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 4895.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361428.3 ENSP00000354964.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361428.3Link to Ensembl Protein Viewer:ENSP00000354964.2Re-query CCDS DB by Nucleotide ID:ENST00000361428Re-query CCDS DB by Protein ID:ENSP00000354964
Original member Current member NCBI NM_014345.3 NP_055160.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014345.3Link to Protein Sequence:NP_055160.2Re-query CCDS DB by Nucleotide ID:NM_014345Re-query CCDS DB by Protein ID:NP_055160Link to BLAST:NP_055160.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055160.2 2279 Q5VUA4-1 2279 100% 0 0

Chromosomal Locations for CCDS 4895.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43337158 43340502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43340790 43340908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43342112 43342211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43342676 43342879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43348324 43348625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43352377 43352476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43354664 43356145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43357126 43357765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43365292 43365440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43368967 43369365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6840 nt):
ATGTACCGCAGCAGCGCTCGCTCCTCCGTCTCTTCCCACCGGCCTAAAGACGACGGCGGGGGCGGCCCGC
GCAGCGGCCGCAGCTCTGGCTCCTCCTCAGGCCCGGCTCGCCGCAGCTCACCGCCGCCTCCGCCCTCCGG
CTCCTCGTCGCGGACCCCGGCTCGCCGACCCCGCTCGCCCTCAGGGCACCGCGGCCGCCGGGCCTCGCCG
TCCCCGCCACGGGGTCGTCGCGTCTCCCCGTCCCCGCCTCGGGCCCGTCGCGGCTCCCCGTCGCCACCGC
GGGGCCGACGACTCTTCCCGCCGGGCCCGGCCGGCTTCAGAGGCAGCAGCCGGGGGGAGTCCCGCGCCGA
CTATGCCCGGGACGGCCGCGGAGACCATCCAGGCGACAGCGGCAGCCGGAGACGCTCTCCTGGTCTGTGT
TCTGACTCTTTGGAAAAGAGCTTAAGGATCACTGTTGGCAATGACCACTTCTGTGTTAGCACACCAGAAC
GGCGACGGCTTAGTGATCGGCTGGGGTCACCAGTGGATAATCTGGAAGACATGGACAGGGATGACCTGAC
TGATGATTCTGTCTTCACTCGAAGCTCCCAGTGCTCTCGGGGTCTTGAGCGATATATTTCCCAGGAGGAA
GGGCCTCTCAGTCCCTTCTTGGGACAACTTGATGAGGACTACCGAACAAAAGAAACTTTCCTGCATCGAT
CTGATTATAGTCCCCATATCAGTTGTCATGATGAGCTGTTGCGGGGAACAGAACGGAATCGAGAAAAACT
CAAAGGCTACTCCATACGATCTGAAGAAAGGAGCCGGGAGGCCAAAAGACCCCGTTATGATGACACAGTG
AAGATAAACAGCATGGGAGGGGATCACCCAAGTTTTACATCAGGAACTCGCAACTATCGACAGCGTAGAA
GAAGCCCAAGTCCTAGGTTTCTCGACCCTGAGTTTCGAGAACTGGATCTTGCCAGACGAAAGCGAGAGGA
AGAGGAGGAGCGAAGTAGGAGCTTGAGTCAGGAGCTGGTTGGAGTTGATGGTGGTGGTACTGGCTGTTCC
ATCCCTGGATTGTCAGGTGTCCTAACAGCATCGGAGCCAGGATATTCTTTGCATCGGCCTGAGGAAGTAT
CTGTGATGCCCAAGAAATCCATTTTGAAGAAGCGGATTGAGGTGGACATAATGGAGCCCTCCATGCAGCT
TGAGAGTTTTTCCAGCAGTACCAGCTCCAGCCAGGATCACCCTCTCTACTCTGGGCACCCATCCCTTCCA
CTAAGTGGTGCTATTGCTGCTTTTGCCTCAGAGATTGAAAACAAGGGGACTATGGTAGAGACTGCCTTGA
AGGAACCTCAGGGCAACCTCTACCAATGGGGTCCCCTTCCTGGGATTCCCAAAGACAACAGTCCTCTCAG
AGAAAAATTTGGAAGTTTTCTATGCCACAAGGATAATTTGGATTTGAAGGCTGAGGGACCTGAGCGACAC
ACAGACTTCCTGCTGCCCCATGAGAGAGCTAGCCAGGATGGCAGTGGTTTTTCCCGCATTCTGAGCATGT
TGGCTGATTCTACCAGTACACAGGAAAAAAGGCGACGTAGCTTTCCCGACATTGAAGATGAGGAGAAATT
TCTCTATGGGGATGAAGAAGAGGATTTAAAGGCAGAATCCGTACCAAAGCCCCTTGGGAGCTCTGAGAGT
GAAGTTATGAGGCAGAAGGCAAGCTCCCTGCCGTCTTCAGCTCCAGCTGTAAAGCTAGAATCACTAGAAG
AGACCAATCCAGAATATGCGAAGATCCATGACTTGCTCAAGACAATAGGGCTGGATATTGGAGTAGCAGA
GATTAGTCAATTGGCTGCACGCACCCAGGAACGACTTCATGGCAAGAAGCCATCATTACGCTCCTCAGCT
GACCGCCGTTCCTCAGTTGACCGATACTTTTCAGCTGACCACTGTTCCTCAGTTGACCACCGCTTCTCAG
CTGACCGCTGTTCCTCAGTTGACCACTGCTTCTCAGCTGATCGACGTTCCTCAGATCCCCACAGACTAGA
GAGCAGGGAGGCACATCATAGCAATACCCACTCTCCAGAGGTGTCCCATCCACACCCACCTTCTCCTGTG
GATCCTTACCTGCTCACAAAAAACAGCCCTCCATTCCTAAAGTCTGACCATCCAGTGGGTCATATTTCAG
GACCAGAGGTGGTTGGTAGTGGGTTTCAGTCATCTGTTGCAGTCAGGTGCATGTTGCCATCAGCCCCATC
TGCCCCAATTAGACTTCCACACACTGCTGCTTTATCTCAGTTTCACATGCCAAGGGCCTCTCAGTTTGCT
GCAGCTCGGATACCTCCGAACTACCAGGGACCTGCCATTCCCCCTGCCTCTTTTGATGCCTATAGGCACT
ACATGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACCACCCTGTACCTGA
ACCACACAGGATAATGCCAATAACCAAACAAGCTACTCGTAGCCGTCCCAATCTTCGTGTGATCCCCACT
GTGACTCCTGATAAGCCTAAGCAGAAAGAGTCTCTGCGAGGCTCAATTCCTGCGGCCCAAGTGCCTGTCC
AGGTGTCCATTCCATCACTCATAAGATATAATCCAGAGAAGATCTCTGATGAGAAGAACCGTGCTTCCCA
GAAGCAAAAGGTTATTGAAGAGAGGGAAAAACTAAAGAATGACCGGGAAGCCCGCCAGAAGAAGATGTAC
TATCTTAGGACCGAGTTAGAGCGGCTTCATAAACAACAAGGAGAAATGCTGCGCAAGAAACGAAGGGAGA
AGGATGGCCACAAAGATCCTCTCTTGGTGGAGGTGAGTCGGCTTCAGGATAACATTATGAAGGACATTGC
AGAGCTACGGCAAGAGGCAGAAGAGGCAGAAAAGAAGCAATCTGAACTGGACAAAGTGGCTCAGATCTTG
GGAATTAACATCTTCGATAAATCCCAGAAGTCTTTAAGTGACAGTAGAGAGCCTACAGAGAAGCCTGGGA
AAGCAGAAAAATCTAAGAGCCCAGAAAAAGTGTCATCGTTCTCAAACTCCTCCTCCAACAAGGAATCAAA
AGTAAACAATGAGAAGTTTCGTACTAAGAGCCCCAAGCCTGCCGAAAGCCCCCAGTCAGCCACTAAGCAG
TTGGATCAGCCCACTGCTGCTTATGAGTATTATGATGCTGGCAATCACTGGTGCAAAGACTGCAACACCA
TCTGTGGGACCATGTTTGATTTCTTCACTCATATGCACAATAAGAAGCACACACAGACACTGGATCCCTA
CAACAGACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGCACTGACAAGATA
ACTGTTCCTGCAAAAGGCTCTGAGTTTCTGGTTCCCATCAGTGGATTTTATTGCCAGCTCTGTGAGGAAT
TTTTGGGGGATCCAATTTCTGGGGAGCAACATGTGAAGGGTCACCAACACAATGAGAAATACAAGAAATA
TGTGGATGAAAACCCATTATATGAGGAGCGGCGGAATCTGGACCGCCAAGCTGGCTTGGCTGTGGTCCTA
GAGACAGAACGGCGACGGCAGAGTGAGCTAAAGCGCAAACTTAGTGAGAAACCAAAGGAGGAGAAGAAAG
AAAAAAAGGCAAAGGCTGTGAAAGAAGTAAAGGAGGATGACAAGGTCTCTGAGAAATTAGAAGACCAACT
CTCTGAGGGTAGGAACTCCCCTGAAAAAGCTGAAAATAAAAGGAACACTGGCATCAAACTCCAGTTAAAA
GAAGAGGTAAAGAAGGAATCACCAACATCATCTTCTTTTGGGAAATTCAGCTGGAAGAAGCCAGAAAAAG
AAGAGGAGAAAAGTTCATTGGTGACCCCAAGTATCTCTAAAGAAGAGATTCTAGAAAGTAGTAAGGACAA
AGAGGATGGCAAAACTGAAGCTGGGAAGGCAAAGCCTATCAAAATCAAGCTCTCTGGGAAAACTGTTGTT
GCACATACCAGCCCTTGGATGCCTGTTGTGACAACTTCCACACAGACTAAGATCCGACCCAACCTGCCTA
TTCCATCCACAGTACTCCGCAAGTCATGTTCAGCCACAATGAGCAAGCCAGCTCCTCTTAACACCTTTCT
GTCTATTAAGTCCTCTGGAACCACTGCTAAACCTCTGCCAGTGGTTAAAGAGTCTTCAGCTGATCTCCTC
TTACCTCCAGACATCATCTCCAAAGCATTTGGAGGGGAAGAGGTGATTCTAAAAGGGTCTCCAGAGGAAA
AAGTGGTGTTGGCTGAAAAGAGTGAGCCATCTCATTTACCTGAACAAATACTACCACCTCCTCCACCACC
CCCACCTCCACCACCTCCACCACCCCCCGTTATACCTCATCCAGCTGCCCCGTCTGCTGCTCAAGCAAAT
GCTATCTTGGCTCCAGTAAAATCAAACCCAGTTGTATCTCAGACTCTCAGCCCTGGCTTCGTGGGTCCTA
ACATTTTGAACCCAGTGTTGCCTGTAGCCATCATGGCCTCAGCACAGCCAGCTGCCATTCCTTCTGATGA
GACAGCTCCTGGGGTGAGTGAGAGTGACCGAGACCAGACCCTGTTCTCTGTGTTAGTACGTCCTCCACCA
CCCCTCTCAAGTGTGTTCAGTGAACAAGCCAAAAAATTAGAGAAGCGAAATTCATGCTTAGCCACAGCCA
ATGCTAAGGACCTGTATGACATATTCTATAGTAGTGGTGGAAAGGGGGCCCCTGAGACTAAGGGGGCCCC
TGAGACTAAGCTAAGTGGTGGTCCATTGGCCAATGGGGAAAATAGCAACCTCTCTAGAACCAAAAGTTCA
GACACCTCTTCTACTTCTCCTTTGAACAGCAGTGCATCCCAAGAGGAGTTGCATCAAGATGAGGGTTTGG
TCGCTGCTCCTATAGTTAGCAACTCTGAAAAGCCCATTGCAAAAACTCTGGTGGCCCTAGGGAAATGGTC
AGTTGTAGAACATGTAGGCCCAAAAAGCACAGGCAGCACCTATGGCTTCCTACAGCCTCTGACAAGGTTG
TGCCAAAGCAGGCCTTATGAAACAATTACCCCAAAGACAGACACTTTGGCCATATGGACCTCTAGTTCCT
TCCAGAGTGACACTAGTAGGGATATATCTCCAGAGAAGAGTGAGCTTGACCTGGGAGAGCCAGGACCACC
TGGTGTAGAACCACCTCCTCAACTGTTAGATATACAGTGCAAAGAATCTCAGAAGTTGGTAGAAATCCAC
CTCAGAGAATCTGTTAACCAGGATAAGGAAAGCCAAGAGCTCCGTAAATCTGAGGATTGTAGAGAAAGTG
AGATAGAGACAAACACTGAACTAAAAGAAAGGGTAAAGGAGCTGTCTGAGGGGATAGTTGATGAGGGAGT
AAGTACCAGCATTGGACCCCACAGCATAGATGATTCTAATTTGAACCATGGAAACAGATACATGTGGGAG
GGAGAAGTAAAACAGCCCAACTTGCTAATGATTGACAAAGAGGCTGAACAGTCCAATAAATTGATGACAG
GAAGTGAAACTCCAAGTAAAGTAGTGATCAAATTGAGTCCACAGGCTTGCTCTTTCACAAAGGCAAAATT
AGACTCATTTTTATCAGAAGCTAGGTCTTTACTCAACCCACAAGATACACCTGTGAAAATTTCTGCCCCA
GAGTTGCTGCTTCATTCCCCAGCCAGATCAGCTATGTGTTTAACAGGTAGTCCACAAGAGCAAGGAGTTT
CAGTTGTTAGTGAGGAGGGGCTAGAGAATTCAGCTCCAGAATCAGCTTCTAGAACTTCTAGGTACAGAAG
TCTCAAACTCAAGAGAGAAAGATCAAAAGACTTTCAAGTTAAAAAGATCTATGAGTTGGCTGTTTGGGAT
GAAAACAAGAAGAGGCCAGAGACCTGGGAGAGCCCAGAGAAACCAAAAACAGAAGCACTGGAGCTACAAG
ATGTCCATCCAGAGTTAACAGTGACAATAGAAAGCAAGGCCCTAGAAGACTTTGAAGCTACAGACTTAAA
GGTAGAGGAGCTTACTGCCCTGGGGAATCTGGGGGATATGCCTGTTGATTTCTGCACTACTCGGGTAAGC
CCAGCACATAGATCCCCAACTGTCTTGTGTCAGAAAGTGTGTGAAGAAAATTCTGTATCACCTATAGGGT
GTAATTCCTCCGATCCCGCTGACTTCGAACCAATCCCATCTTTTTCTGGGTTTCCGTTAGATTCTCCCAA
AACCTTGGTGCTTGACTTTGAGACAGAGGGTGAACGAAACTCACCTAATCCCAGGAGTGTTAGGATCCCT
TCTCCTAACATTTTGAAAACTGGACTTACAGAAAATGTTGACCGTGGCTTGGGGGGCCTAGAGGGAACAC
ACCAGGCCCTTGACCTGTTAGCAGGAGGAATGATGCCTGAGGAAGTAAAAGAATCTTCCCAATTAGACAA
ACAAGAGTCACTCGGATTGGAATTAAAAACAATTAATTCTGCAGGCCTTGGGCCATCTCCTTGCCTTCCA
GACCTTGTTGACTTTGTCACACGGACCTCTGGAGTTCAAAAAGATAAACTGTGTTCTCCACTCTCTGAGC
CAGGTGACCCTTCTAAATGTAGTTCCCTGGAGTTGGGGCCATTACAGCTAGAAATATCGAATGCATCCAC
CACAGAGGTGGCAATTCTGCAAGTAGATGATGACAGTGGCGACCCTCTGAATTTGGTTAAAGCTCCAGTG
TCAAGGTCCCCTCCAAGGGAGCAGGTAATTGAAGACAATATGGTCCCTCAGGGAATGCCTGAACAGGAAA
CTACAGTTGGTGCCATCCAGGACCACACAGAATCCAGTGTTCACAACTAA

Translation (2279 aa):
MYRSSARSSVSSHRPKDDGGGGPRSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASP
SPPRGRRVSPSPPRARRGSPSPPRGRRLFPPGPAGFRGSSRGESRADYARDGRGDHPGDSGSRRRSPGLC
SDSLEKSLRITVGNDHFCVSTPERRRLSDRLGSPVDNLEDMDRDDLTDDSVFTRSSQCSRGLERYISQEE
GPLSPFLGQLDEDYRTKETFLHRSDYSPHISCHDELLRGTERNREKLKGYSIRSEERSREAKRPRYDDTV
KINSMGGDHPSFTSGTRNYRQRRRSPSPRFLDPEFRELDLARRKREEEEERSRSLSQELVGVDGGGTGCS
IPGLSGVLTASEPGYSLHRPEEVSVMPKKSILKKRIEVDIMEPSMQLESFSSSTSSSQDHPLYSGHPSLP
LSGAIAAFASEIENKGTMVETALKEPQGNLYQWGPLPGIPKDNSPLREKFGSFLCHKDNLDLKAEGPERH
TDFLLPHERASQDGSGFSRILSMLADSTSTQEKRRRSFPDIEDEEKFLYGDEEEDLKAESVPKPLGSSES
EVMRQKASSLPSSAPAVKLESLEETNPEYAKIHDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSA
DRRSSVDRYFSADHCSSVDHRFSADRCSSVDHCFSADRRSSDPHRLESREAHHSNTHSPEVSHPHPPSPV
DPYLLTKNSPPFLKSDHPVGHISGPEVVGSGFQSSVAVRCMLPSAPSAPIRLPHTAALSQFHMPRASQFA
AARIPPNYQGPAIPPASFDAYRHYMAYAASRWPMYPTSQPSNHPVPEPHRIMPITKQATRSRPNLRVIPT
VTPDKPKQKESLRGSIPAAQVPVQVSIPSLIRYNPEKISDEKNRASQKQKVIEEREKLKNDREARQKKMY
YLRTELERLHKQQGEMLRKKRREKDGHKDPLLVEVSRLQDNIMKDIAELRQEAEEAEKKQSELDKVAQIL
GINIFDKSQKSLSDSREPTEKPGKAEKSKSPEKVSSFSNSSSNKESKVNNEKFRTKSPKPAESPQSATKQ
LDQPTAAYEYYDAGNHWCKDCNTICGTMFDFFTHMHNKKHTQTLDPYNRPWASKTQSEAKQDAIKRTDKI
TVPAKGSEFLVPISGFYCQLCEEFLGDPISGEQHVKGHQHNEKYKKYVDENPLYEERRNLDRQAGLAVVL
ETERRRQSELKRKLSEKPKEEKKEKKAKAVKEVKEDDKVSEKLEDQLSEGRNSPEKAENKRNTGIKLQLK
EEVKKESPTSSSFGKFSWKKPEKEEEKSSLVTPSISKEEILESSKDKEDGKTEAGKAKPIKIKLSGKTVV
AHTSPWMPVVTTSTQTKIRPNLPIPSTVLRKSCSATMSKPAPLNTFLSIKSSGTTAKPLPVVKESSADLL
LPPDIISKAFGGEEVILKGSPEEKVVLAEKSEPSHLPEQILPPPPPPPPPPPPPPPVIPHPAAPSAAQAN
AILAPVKSNPVVSQTLSPGFVGPNILNPVLPVAIMASAQPAAIPSDETAPGVSESDRDQTLFSVLVRPPP
PLSSVFSEQAKKLEKRNSCLATANAKDLYDIFYSSGGKGAPETKGAPETKLSGGPLANGENSNLSRTKSS
DTSSTSPLNSSASQEELHQDEGLVAAPIVSNSEKPIAKTLVALGKWSVVEHVGPKSTGSTYGFLQPLTRL
CQSRPYETITPKTDTLAIWTSSSFQSDTSRDISPEKSELDLGEPGPPGVEPPPQLLDIQCKESQKLVEIH
LRESVNQDKESQELRKSEDCRESEIETNTELKERVKELSEGIVDEGVSTSIGPHSIDDSNLNHGNRYMWE
GEVKQPNLLMIDKEAEQSNKLMTGSETPSKVVIKLSPQACSFTKAKLDSFLSEARSLLNPQDTPVKISAP
ELLLHSPARSAMCLTGSPQEQGVSVVSEEGLENSAPESASRTSRYRSLKLKRERSKDFQVKKIYELAVWD
ENKKRPETWESPEKPKTEALELQDVHPELTVTIESKALEDFEATDLKVEELTALGNLGDMPVDFCTTRVS
PAHRSPTVLCQKVCEENSVSPIGCNSSDPADFEPIPSFSGFPLDSPKTLVLDFETEGERNSPNPRSVRIP
SPNILKTGLTENVDRGLGGLEGTHQALDLLAGGMMPEEVKESSQLDKQESLGLELKTINSAGLGPSPCLP
DLVDFVTRTSGVQKDKLCSPLSEPGDPSKCSSLELGPLQLEISNASTTEVAILQVDDDSGDPLNLVKAPV
SRSPPREQVIEDNMVPQGMPEQETTVGAIQDHTESSVHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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