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Report for CCDS48822.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48822.1 Public Mus musculus 11 Dhrs7c 23 108 98 CCDS HistoryNCBI Gene:68460Re-query CCDS DB by CCDS ID:48822.1Re-query CCDS DB by GeneID:68460See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48822.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168612.7 ENSMUSP00000130924.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168612.7Link to Ensembl Protein Viewer:ENSMUSP00000130924.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168612Re-query CCDS DB by Protein ID:ENSMUSP00000130924
Original member Current member NCBI NM_001013013.2 NP_001013031.2 Accepted alive Link to Nucleotide Sequence:NM_001013013.2Link to Protein Sequence:NP_001013031.2Re-query CCDS DB by Nucleotide ID:NM_001013013Re-query CCDS DB by Protein ID:NP_001013031Link to BLAST:NP_001013031.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013031.2 311 Q8CHS7 311 100% 0 0

Chromosomal Locations for CCDS 48822.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67798626 67798779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67809783 67809895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67811455 67811665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67812665 67812757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67814994 67815149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67815745 67815953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGGGCTCATGGCTGTCCTGATGCTACCCCTGCTGCTGCTGGGAATCAGCGGCCTCCTCTTCATTTACC
AGGAGGCATCCAGGCTGTGGTCGAAGTCTGCCGTGCAGAACAAAGTGGTGGTCATCACAGATGCCATCTC
AGGACTGGGAAAGGAGTGTGCTCGGGTGTTCCATGCAGGTGGGGCAAGGCTGGTGCTGTGTGGAAAGAAC
TGGGAGGGACTGGAGAGCCTCTATGCCACCTTGACCAGTGTGGCTGACCCCAGCAAGACATTCACCCCCA
AGCTGGTCCTCCTGGATCTCTCAGACATTAGCTGTGTTCAAGATGTGGCCAAAGAGGTCCTGGACTGCTA
CGGCTGTGTGGACATCCTCATCAACAATGCCAGCGTGAAAGTGAAGGGGCCTGCCCACAAGATTTCCCTG
GAGCTTGACAAAAAGATCATGGATGCCAACTACTTCGGACCCATCACTTTAACCAAAGTTCTGCTTCCCA
ACATGATCTCCAGGAGAACAGGCCAGATTGTGTTAGTGAACAACATCCAAGCGAAGTTTGGAATCCCGTT
CCGCACAGCTTATGCAGCTTCTAAGCATGCCGTCATGGGCTTCTTTGACTGCCTCCGAGCCGAGGTTGAG
GAATACGATGTTGTGGTCAGCACCGTGAGCCCAACTTTCATCCGCTCCTACCGTGCTTCCCCTGAGCAAA
GAAACTGGGAGACATCCATTTGTAAATTCTTCTGCAGGAAGCTAGCCTATGGCGTGCACCCGGTGGAGGT
GGCTGAGGAAGTGATGCGCACAGTACGGAGGAAGAAGCAAGAGGTGTTCATGGCCAACCCGGTCCCCAAG
GCTGCCGTGTTCATCCGCACCTTCTTCCCTGAGTTCTTCTTCGCTGTGGTGGCCTGTGGGGTGAAGGAGA
AGCTCAATGTCCCAGAAGAGGGTTAA

Translation (311 aa):
MGLMAVLMLPLLLLGISGLLFIYQEASRLWSKSAVQNKVVVITDAISGLGKECARVFHAGGARLVLCGKN
WEGLESLYATLTSVADPSKTFTPKLVLLDLSDISCVQDVAKEVLDCYGCVDILINNASVKVKGPAHKISL
ELDKKIMDANYFGPITLTKVLLPNMISRRTGQIVLVNNIQAKFGIPFRTAYAASKHAVMGFFDCLRAEVE
EYDVVVSTVSPTFIRSYRASPEQRNWETSICKFFCRKLAYGVHPVEVAEEVMRTVRRKKQEVFMANPVPK
AAVFIRTFFPEFFFAVVACGVKEKLNVPEEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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