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Report for CCDS48775.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48775.1 Public Mus musculus 11 Rnf145 23 108 98 CCDS HistoryNCBI Gene:74315Re-query CCDS DB by CCDS ID:48775.1Re-query CCDS DB by GeneID:74315See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48775.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000101327.2 ENSMUSP00000098881.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000101327.2Link to Ensembl Protein Viewer:ENSMUSP00000098881.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000101327Re-query CCDS DB by Protein ID:ENSMUSP00000098881
Original member Current member NCBI NM_001166553.1 NP_001160025.1 Accepted alive Link to Nucleotide Sequence:NM_001166553.1Link to Protein Sequence:NP_001160025.1Re-query CCDS DB by Nucleotide ID:NM_001166553Re-query CCDS DB by Protein ID:NP_001160025Link to BLAST:NP_001160025.1

Chromosomal Locations for CCDS 48775.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 44524960 44525143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44531276 44531384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44542629 44542720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44548764 44548999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44551644 44551823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGGCTGCGAAGGAGAAACTGGAGGCAGTGCTGAACGTGGCCTTGAGGGTGCCAAGCATCATGCTGCTGG
ATGTCCTTTACCGCTGGGACGTCAGCTCCTTTTTCCAGCAGATCCAAAGAAGCAGCCTCAACAACAACCC
TCTTTTCCAGTACAAATACTTGGCTCTTAATATGCATTACGTAGGTTATATCTTAAGTGTCGTGCTCCTC
ACTCTGCCCAGGCAGCATCTGGTGCAGCTCTATTTGTATTTTGTGACTGCCCTGCTCCTCTATGCTGGAC
ATCAGATATCCAGGGACTACGTAAGGAGTGAACTGGAGTCTGCCTATGAAGGACCAATGTATTTAGAACC
TCTCTCCATGAACCGCTTTACCACAGCCTTAATAGGTCAGTTAGTGGTGTGCACCTTGTGCTCCTGCGTT
ATGAAGACGAAGCAGATCTGGCTCTTCTCGGCACACATGCTTCCTCTGCTGGCTCGCCTCTGCCTCGTTC
CTCTGGAGACCATCGTCATCATCAACAAATTTGCTATGATTTTTACAGGATTGGAAGTCCTGTACTTCCT
AGGGTCTAATCTCCTAGTACCGTATAACCTCGCTAAGTCTGCATACCGGGAGTTAGTTCAGGTAGTGGAG
GTGTACGGCCTTCTGGCCTTGGGAATGTCCCTGTGGAACCAGCTGGTGGTGCCCGTGCTCTTCATGGTCT
TCTGGCTTGTTTTATTTGCTCTTCAGATCTACTCCTACTTCAGCACCAGAGATCAGCCTGCATCCCGGGA
GAGGCTTCTCTTCCTTTTCCTGACAAGGTAA

Translation (266 aa):
MAAKEKLEAVLNVALRVPSIMLLDVLYRWDVSSFFQQIQRSSLNNNPLFQYKYLALNMHYVGYILSVVLL
TLPRQHLVQLYLYFVTALLLYAGHQISRDYVRSELESAYEGPMYLEPLSMNRFTTALIGQLVVCTLCSCV
MKTKQIWLFSAHMLPLLARLCLVPLETIVIINKFAMIFTGLEVLYFLGSNLLVPYNLAKSAYRELVQVVE
VYGLLALGMSLWNQLVVPVLFMVFWLVLFALQIYSYFSTRDQPASRERLLFLFLTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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