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Report for CCDS48774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48774.1 Public Mus musculus 11 Pwwp2a 23 108 98 CCDS HistoryNCBI Gene:70802Re-query CCDS DB by CCDS ID:48774.1Re-query CCDS DB by GeneID:70802See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 48774.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061070.5 ENSMUSP00000054154.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061070.5Link to Ensembl Protein Viewer:ENSMUSP00000054154.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000061070Re-query CCDS DB by Protein ID:ENSMUSP00000054154
Original member NCBI NM_027557.1 NP_081833.1 Updated not alive Link to Nucleotide Sequence:NM_027557.1Link to Protein Sequence:NP_081833.1Re-query CCDS DB by Nucleotide ID:NM_027557Re-query CCDS DB by Protein ID:NP_081833
Current member NCBI NM_027557.2 NP_081833.1 Accepted alive Link to Nucleotide Sequence:NM_027557.2Link to Protein Sequence:NP_081833.1Re-query CCDS DB by Nucleotide ID:NM_027557Re-query CCDS DB by Protein ID:NP_081833Link to BLAST:NP_081833.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081833.1 730 Q69Z61-1 730 100% 0 0

Chromosomal Locations for CCDS 48774.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 43682093 43682616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43704534 43706202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2193 nt):
ATGGCGGCCGTGGCTGCTGAGGCGGCGGCGACCGCGGCGTCCCCCGGGGAAGGGGGCGCCGGCGAGGCCG
AGCCGGAGCTAGAGCCCATTCCCGGCAGCGAAGCCGGCACCCCCCTCCCGGTCACGGCCACGGAGGCGGC
GGTGCCGGACGGCGAGGCCGACGGGCGCCAGTCCGCCCCTCAGGCCGACGAGCAGCCGCTGCCGCCACCG
CCGCCGCCGCCGCCGCCGGGGGAGCTGGCCGATAGCTCCGAGGCTGAGGAGGCGAAGCCGCCCGAGCCCG
CGGCTGTCCCGGTCTCGCCGCCCGAGCAGCCTCCGGCCGCCCCCGAGCAGCCCGAGGACGCGCCGCGGCC
GCCACCAGCTCCGGCGCTCGTGCCGCCGGCGGGCGGGGACTCGGCGGTGTCGCACCTCATCCCCGGCTCG
GAGGTGCGGGTCACGCTGGACCACATCATCGAGGACGCGCTCGTCGTGTCGTTCCGCCTCGGGGAGAAGC
TCTTCTCCGGGGTCCTCATGGACCTATCCAAAAGGTTTGGGCCCCATGGGATCCCTGTGACAGTATTTCC
CAAAAGGGAATATAAGGACAAACCGGACGCCATGCAGCTCCAAAGTACCACATTCCAAGAAGGGATAGAA
GTCAAGCAGGAAGTGAACGGTGCTGTTCCCGATGACCTCTCTCCAGTCCCTCCTCCTGAGCGCCTGTGGG
CTTCCAAGCCACCTCCTCTCTTCCATGAAGGAGCACCTTACCCTCCCCCCTTGTTTATCAGGGACACATA
TAACCAATCAATACCTCAGCCGCCGCCTCGGAAAATTAAGCGACCCAAACGAAAAATGTACAGGGAAGAA
CCCACTTCAATAATGAATGCGATTAAGCTACGGCCCAGGCAAGTCCTGTGTGATAAGTGTAAAAACAGTG
TTGTTGCTGAAAAGAAGGAAATTAGGAAAGGTAGCAGTGACTCTTCTAGGTATGAAGATAAAAAACGGAG
AAATGACAGTGTAGCTACTGTGAACAAAAAACTGAAAACTGACCATAAAGTGGATGGGAAAAACCAAAAC
GAAAGCCAGAGAAGGAACACTGTGGTGAGGGTTTCCAGTATCGCTCACAGCAGGGGCAGAGTAGTCAAGG
TTTCTGCTCAGGCAAATACATCAAAAGCTCAGTTAAATACCAAGAAAGTGCTCCAAAGCAAGAACATGGA
TCACGCAAAAGCTCGGGAAGTATTGAAAATTGCCAAAGAAAAGGCACAGAAGAAGCAAAGTGAAACCTCC
ACTTCCAAAACCGCCCATGCGAAAGTCCACTTCACACGTCGGTATCAGAGTCCCAGCTCAGGTTCTCTCC
CACCCCGAGTGCGGTTAAAACCACAAAGGTACAGGAACGAAGAAAATGACTCTTCTCTGAAGACGGGACT
GGAGAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCCGCAGTCTCGATGCACCTCCACCCGCTCAGCAGGT
GAGGCCCCTTCAGAAAAACCGAGTCCCTCAGAAGGCCCGGAAGAGTCCGCCGGTGAGGTTCAGGACACAA
GCAGAGTGCGTGTGCCTGGTGAGCAGGAGGAACTGCGGATGTTGGGCAAAAAGGGCAGCAAAAGCAGTAT
CTCTGTTTACCTGACCCTAAATCAGGAGACATCTGACTCTTCCAGTGCCTCAGTGTGTAGCATTGATAGC
ATGGATGATTTGAAATCCTCCAACTCTGAGTGTAGCTCTTCTGAGAGCTTCGTTTTTCCTCCCGGCTGTA
TGCACGCACCTTCTGCCTCTTCCACTTCTACTTCCTTCTCTTCAAAGGAAGAGAATAGCCTCCGTAATTC
TTTGAAAATGAAAATCTTTTCAAAAAATGTCTCTAAATGTATCACACCAGATGGCAGGACCATATGTGTA
GGGGACATTGTTTGGGCCAAGATATATGGCTTCCCTTGGTGGCCAGCCCGTATTCTTACCATCACTGTAA
GCCGGAAAGATAACGGCCTTTTAGCCCGGCAGGAGGCCCGTATCTCATGGTTTGCATCTCCAACCACATC
TTCCCTTGCTCTCTCACAACTCTCCCCCTTTCTAGAAAACTTCCAGTTACGGTTTAATAAGAAGAGAAAG
GGTCTGTATCGCAGGGCTATCACAGAGGCTGCTAAGGCTGCTAAGCAGCTGACCCCTGAAGTGCGGGCTT
TGTTGACACAATTTGAAACGTGA

Translation (730 aa):
MAAVAAEAAATAASPGEGGAGEAEPELEPIPGSEAGTPLPVTATEAAVPDGEADGRQSAPQADEQPLPPP
PPPPPPGELADSSEAEEAKPPEPAAVPVSPPEQPPAAPEQPEDAPRPPPAPALVPPAGGDSAVSHLIPGS
EVRVTLDHIIEDALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPDAMQLQSTTFQEGIE
VKQEVNGAVPDDLSPVPPPERLWASKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREE
PTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSDSSRYEDKKRRNDSVATVNKKLKTDHKVDGKNQN
ESQRRNTVVRVSSIAHSRGRVVKVSAQANTSKAQLNTKKVLQSKNMDHAKAREVLKIAKEKAQKKQSETS
TSKTAHAKVHFTRRYQSPSSGSLPPRVRLKPQRYRNEENDSSLKTGLEKIRSGKLAPKPQSRCTSTRSAG
EAPSEKPSPSEGPEESAGEVQDTSRVRVPGEQEELRMLGKKGSKSSISVYLTLNQETSDSSSASVCSIDS
MDDLKSSNSECSSSESFVFPPGCMHAPSASSTSTSFSSKEENSLRNSLKMKIFSKNVSKCITPDGRTICV
GDIVWAKIYGFPWWPARILTITVSRKDNGLLARQEARISWFASPTTSSLALSQLSPFLENFQLRFNKKRK
GLYRRAITEAAKAAKQLTPEVRALLTQFET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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