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Report for CCDS48704.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48704.1 Public Mus musculus 10 Tbc1d30 23 108 98 CCDS HistoryNCBI Gene:74694Re-query CCDS DB by CCDS ID:48704.1Re-query CCDS DB by GeneID:74694See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48704.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064107.6 ENSMUSP00000070488.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064107.6Link to Ensembl Protein Viewer:ENSMUSP00000070488.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000064107Re-query CCDS DB by Protein ID:ENSMUSP00000070488
Original member Current member NCBI NM_029057.2 NP_083333.1 Accepted alive Link to Nucleotide Sequence:NM_029057.2Link to Protein Sequence:NP_083333.1Re-query CCDS DB by Nucleotide ID:NM_029057Re-query CCDS DB by Protein ID:NP_083333Link to BLAST:NP_083333.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083333.1 766 Q69ZT9 766 100% 0 0

Chromosomal Locations for CCDS 48704.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 121266825 121267624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121271995 121272201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121275728 121275867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121279098 121279210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121288880 121288985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121294589 121294757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121296692 121296860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121301937 121302122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121304346 121304471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121306156 121306221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121306822 121306883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121310644 121310800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2301 nt):
ATGCGGCAAGACAAACTGACCGGCTCCCTGCGTCGCGGCGGGCGATGCCTCAAGCGCCAGGGCGGCGGTG
GCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATCTCGCGGACCGCGCCCCGGTTGCT
CTGCACCTTGGAGCCGGGAGTTGATACAAAATTGAAGTTCACACTTGAGCCTTCTTTGGGTCAAAATGGT
TTTCAGCAGTGGTATGATGCTCTCAAGGCTGTGGCCAGACTGTCAACGGGGATACCAAAGGAATGGAGGA
GAAAGGTTTGGTTGACCTTGGCGGATCATTATCTGCACAGTATAGCCATCGACTGGGACAAAACCATGCG
TTTCACTTTCAATGAGAGAAGCAACCCGGATGACGACTCCATGGGAATTCAAATCGTCAAGGATCTGCAT
CGCACGGGCTGTAGTTCCTACTGTGGCCAGGAGGCAGAGCAAGACAGGGTGGTACTAAAGCGGGTGCTAT
TGGCTTACGCCCGGTGGAACAAGAACGTCGGGTACTGCCAAGGCTTCAACATCCTGGCTGCCCTCATTCT
GGAAGTGATGGAGGGCAACGAGGGGGACGCGCTGAAGATTATGATTTATCTGATTGATAAGGTACTCCCC
GAAAGCTACTTTGTCAATAATCTCCGGGCACTGTCTGTGGATATGGCTGTCTTCAGAGATCTCTTGAGAC
TGAAGCTCCCCGAGCTGTCTCAGCACCTCGACACACTTCAGAGAACGGCGAACAAAGAGAGCGGAGGCGG
ATACGAGCCCCCGCTCACCAACGTCTTCACAATGCAGTGGTTCCTCACGCTCTTTGCCACGTGCCTCCCG
AACCACACGGTTCTGAAGATCTGGGACTCCGTGTTCTTCGAAGGTTCAGAGATCATCCTGAGGGTGTCGC
TGGCCATCTGGGCAAAGCTGGGAGAGCAGATAGAATGTTGCGAGACAGCAGACGAATTCTACGGCACCAT
GGGGCGCCTCACCCAGGAGATGCTGGAGCAGGATCTGCTACAGAGCCATGAACTCATGCAGACCGTGTAT
TCGATGGCCCCTTTCCCGTTCCCGCAGTTGGCAGAGTTGAGGGAAAAGTATACCTATAACATCACACCGT
TTCCAGCCACGATTAAGCCCACTTCAGTTTCTGGGCGACACAGTAAGGCCAGAGATAGTGACGATGAGAA
CGGCCCGGATGATGAGGATGCTGTTGCGAGTGCCGTGGGGTGCCTTGGACCGCTCAGTGGGCTCCTGGCA
CCTGAACTGCAGAAGTACCAAAAGCAGATTAAAGAAGCGACTGAGGAACAGACCCTCAGATCGAACAACA
TCGCAGAGCTGAGCCCAGGAGCCATCAATTCCTGTCGGAGTGAGTACCATGCAGCGTTCAACAGTATGAT
GATGGAGCGGATGACCACGGACATCAACGCCCTGAAGCGGCAGTACTCCCGAATTAAGAAGAAGCAACAG
CAGCAGCTCCATCAGGTGTACATAAGGGCAGACAAAGGGCCGGTGACCAGCATCCTCCCATCGCAGGCAA
ATAGTTCTCCCGTGATCAACCACCTTCTTCTGGGGAAAAAGATGAAAATTACAAACAGAGCAGCCAAGAA
TGCAGTGATCCACGTGCCAGGCCACCCAGGAGGGAAAATCTCTCCCGTCCCCTATGAAGACATTAAGACA
AAGCTCAACTCTCCATGGCGGACTCACATCCGAGTCCACAAAAAGAACATGCCGAGGACCAAGAGTCATC
TAGGCTGCGGAGACACGGTAGGGCTGATAGAAGAACAGAGTGAAGGCTGTAAGGCCAGCAGCTTGGGGGC
AGCCGAGGAGTTTCCCTCCGGTCGTACAGTAACAGCTCACAGTGAAGGCAGCAGCGGTGATGGTGATGGA
GGCGGCAGCACTCCGAGGACGATCGAAGGGCAGTCTCCGGAGCCAGTGTTTGGGGATGCTGACGTCGACG
TGGCTGCAGTTCAGGTGAAATTAGAAGCCTTGGAACTGAACCAAAGGGATGCCGCGGCAGAAACGGAACC
CAAGGTGCACTTCCCCTGCCAGCGGCACGCTTCAGAGTTAGCCGATGCCCCTGGAGAAAACCAGACTGCC
ATCAAACTTCTCCCGGGAAGCACCTCAAAAACCCCCATCTTCAGCCCCTTTCCCAGTGTCAAGCCACTGC
GAAAGTCAGCCACGGCCAGGAATTTGGGGTTATATGGCCCCACAGAAAGAACCCCAAACGTGCACTTCCC
TCAGATGAGCAGGGGCTTCAACAAGTCCGGCATTGGGAACAGCAGCACCAAGAAGCGATGA

Translation (766 aa):
MRQDKLTGSLRRGGRCLKRQGGGGVGTILSNVLKKRSCISRTAPRLLCTLEPGVDTKLKFTLEPSLGQNG
FQQWYDALKAVARLSTGIPKEWRRKVWLTLADHYLHSIAIDWDKTMRFTFNERSNPDDDSMGIQIVKDLH
RTGCSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQGFNILAALILEVMEGNEGDALKIMIYLIDKVLP
ESYFVNNLRALSVDMAVFRDLLRLKLPELSQHLDTLQRTANKESGGGYEPPLTNVFTMQWFLTLFATCLP
NHTVLKIWDSVFFEGSEIILRVSLAIWAKLGEQIECCETADEFYGTMGRLTQEMLEQDLLQSHELMQTVY
SMAPFPFPQLAELREKYTYNITPFPATIKPTSVSGRHSKARDSDDENGPDDEDAVASAVGCLGPLSGLLA
PELQKYQKQIKEATEEQTLRSNNIAELSPGAINSCRSEYHAAFNSMMMERMTTDINALKRQYSRIKKKQQ
QQLHQVYIRADKGPVTSILPSQANSSPVINHLLLGKKMKITNRAAKNAVIHVPGHPGGKISPVPYEDIKT
KLNSPWRTHIRVHKKNMPRTKSHLGCGDTVGLIEEQSEGCKASSLGAAEEFPSGRTVTAHSEGSSGDGDG
GGSTPRTIEGQSPEPVFGDADVDVAAVQVKLEALELNQRDAAAETEPKVHFPCQRHASELADAPGENQTA
IKLLPGSTSKTPIFSPFPSVKPLRKSATARNLGLYGPTERTPNVHFPQMSRGFNKSGIGNSSTKKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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