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Report for CCDS48666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48666.1 Public Mus musculus 10 Mybpc1 23 108 98 CCDS HistoryNCBI Gene:109272Re-query CCDS DB by CCDS ID:48666.1Re-query CCDS DB by GeneID:109272See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48666.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121629.7 ENSMUSP00000112615.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121629.7Link to Ensembl Protein Viewer:ENSMUSP00000112615.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121629Re-query CCDS DB by Protein ID:ENSMUSP00000112615
Original member Current member NCBI NM_175418.5 NP_780627.2 Accepted alive Link to Nucleotide Sequence:NM_175418.5Link to Protein Sequence:NP_780627.2Re-query CCDS DB by Nucleotide ID:NM_175418Re-query CCDS DB by Protein ID:NP_780627Link to BLAST:NP_780627.2

Chromosomal Locations for CCDS 48666.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 88519930 88519943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88522967 88523153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88524969 88525105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88526282 88526441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88529425 88529564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88531669 88531864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88533485 88533573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88536315 88536482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88540949 88541083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88542328 88542516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88543718 88543822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88545972 88546131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88548768 88548901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88549257 88549363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88551394 88551556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88553256 88553422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88554664 88554769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88555616 88555740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88558571 88558703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88560224 88560390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88566508 88566564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88568598 88568649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88570539 88570656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88571520 88571668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88573416 88573529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88582007 88582048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88585660 88585695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 88604901 88604925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3375 nt):
ATGCCAGAACCCACTAAGAAAGAGGAAAATGAAGTGTCCGCCCCAGCCCCTCCCCCGGAAGAACCAAATA
AA
GAGAAAGAGGCGGGAACCGCTCCAGCAAAAGAATGGTCTCTTGGTGAGTCACCTGCTGGCGGGGAAGA
G
CAGGACAAACAGAATGCCAACTCCCAGCTGTCCACCCTGTTTGTTGAAAAACCTCAAACCGGATCGGTG
AAA
GTTGGTGCAAACATCACCTTTGTAGCCAAAGTTAGGGCTGAAGATCTTCTTAGAAAACCCACTGTCA
AA
TGGTTCAAGGGGAAATGGATGGATCTGGCCAGCAAAGCCGGGAAACACCTGCAGCTGAAGGAGACCTT
C
GAGAGGCAAACTCGGGTATACACATTCGAGATGCAGATCATCAAAGCCAAAGAGAACTACGCAGGGAAT
TAT
AGGTGTGAGGTCACCTACAAGGATAAATTTGACAGCTGTTCGTTTGATCTTGAAGTCCATGAGTCTA
CT
GGGACTACTCCAAACATTGACATCAGATCTGCCTTCAAAAGAAGTGGAGAAGGTCAAGAGGATGCAGG
G
GAACTTGACTTTAGTGGTCTCCTGAAACGTAGGGAGGTGAAGCAGCAGGAAGAGGAGCCTGAGATAGAC
GTG
TGGGAGCTGCTGAAAAATGCCAACCCCAACGAATACGAGAAGATCGCTTTCCAGTATGGCATCACCG
AC
TTGCGTGGCATGCTTAAGCGGCTCAAGCGCATGCGCAGGGTGGAAAAGAAGAGCGCAGCTTTTGCAAA
A
ATTCTCGATCCTGCATATCAGGTGGATAAAGGAGGCAAAGTGAGATTTGTCGTGGAGTTGGCAGACCCA
AAA
CTGGAGGTGAAATGGTTTAAAAATGGCCAAGAGATTCGACCCAGCACAAAATACATCTTTGAGCACA
AA
GGAAACGAGAGAATCATGTTTATTAATAACTGTTCGCTGACAGATGATTCGGAGTACTATGTGACAGC
T
GGAGATGAGAAATGTTCTACTGAGCTCTTTGTAAGAGAGCCTCCAATCATGGTGACTAAGCAGCTGGAA
GAC
ATGAACGCTTACTGTGGGGAGAGGGTAGAGATGGAAGTTGAGGTGTCTGAAGATGACGCCAATGTAA
AA
TGGTTTAAGAATGGTGAAGAGATCTTCCCTGGTCCAAAGTCAAGATACAAGATTAAAGTTGAAGGCAA
A
AAGCACACGTTGATCATAGAAGGGGCAACAAAGGCTGACAGTGCGGAGTACTCAGCCATGACAACCGGG
GGA
CAATCATCTGCCAAACTCAGCGTTGACTTGAGACCTCTAAAGATCACGACGCCTCTGACGGACCAGA
CA
GTAAAACTTGGGAAAGAAGTATGCTTGAAGTGTGAAATCTCTGAAAATGTACCAGGAAAATGGACAAA
A
AATGGCCTCCCTGTTCAGGAGGGTGAGCGTCTGAAGGTTGTTCACAAGGGAAGAATCCACAAGTTAGTC
ATA
GCCAATGCTCTCATTGAAGATGAAGGTGAATATGTATTTACACCAGATGCCTACAATGTTCCTTTGT
CT
GCCAAAGTTCATGTCATCGACCCTCCCAAGATCATCCTGGATGGCCTGGATGCTGATAACACAGTGAC
A
GTGATAGCTGGAAGCAAGCTTCGCCTGGAGATTCCTGTCACAGGGGAACCACCTCCCAAAGCCATCTGG
AGC
CGAGCAGATAAGGCTATTATGGAAGGCAGTGGTCGGATCAGGGCAGAATCCTACCCTGACAGCAGCA
CA
CTGGTCATTGACGTGGCAGAGAGAGACGACTCTGGTGTGTACAACATAAATCTGAAAAATGAGGCTGG
A
GAAGCACATGCAAGCATCAAGATTAAGGTTGTGGATATCCCTGATCCTCCAGTGGCACCAAATGTGACA
GAA
GTGGGAGATGACTGGTGCATCATGAACTGGGAGCCTCCTGCCTATGATGGAGGGTCTCCAATCTTAG
GA
TACTTTATTGAGAGGAAAAAGAAACAAAGCTCCAGGTGGATGAGACTGAATTTCGATCTCTGCAAAGA
G
ACAACTTTTGAGCCCAAGAAGATGATTGAAGGCGTGGCCTACGAGGTCCGAATCTTTGCGGTCAACGCC
ATT
GGCATCTCCAAGCCCAGTATGCCCTCCAAGCCCTTTGTTCCTTTGGCTGTGACCAGCCCTCCTACTC
TT
CTGGCTGTCGACTCCGTGACTGACTCGTCTGTGACGATGAAGTGGAGGCCCCCAGATCAGATTGGCGC
A
GCAGGTTTAGATGGCTATGTGCTAGAGTATTGCTTTGAAGGAACTGAGGACTGGATAGTTGCAAACACA
GAC
CTGATCGACAAGACCAAGTTCACCATCAATGGTCTGCCCACGGATGCGAAGATCTTTGTACGTGTGA
AG
GCTATTAACGCGGCTGGGGCTAGTGAGCCCAAGTACTATTCTCAGCCCATCCTTGTGAAGGAAATCAT
T
GAGCCACCAAAGATTCGCATCCCAAGGCATCTGAAGCAAACTTACATCCGCAGAGTCGGAGAAGCTGTC
AAT
CTGGTGATTCCTTTTCAGGGTAAACCAAGACCAGAGTTGACCTGGAAGAAGGACGGTGAAGAAATTG
AC
AAGAATCAAATAAACATTCGCAACTCAGAAACTGATACCATCATATTCATCCGGAAAGCAGAGCGGAG
C
CACTCGGGCAAGTACGACCTGCAGGTCAAAGTGGATAAATACGTGGAAAATGCCTCTATCGACATCCAG
ATT
GTTGACCGTCCAGGTCCACCCCAGACTGTGACTATTGAAGATGTGTGGGGAGAGAATGTTGCCCTAA
CA
TGGACACCACCAAAGGACGATGGGAATGCTGCCATCACAGGGTACACCATCCAGAAGGCCGACAAGAA
A
AGCATGGAATGGTTCACCGTCATTGAACATTACCACCGAACCAACGCCACCATTACTGAGCTGGTCATA
GGG
AACGAGTATTACTTCCGGGTCTTTGCTGAAAACATGTGCGGCCTTAGCGAGGATGCAACTATGACGA
AG
GAGAGTGCAGTGATTGCCAAGGACGGTAAGATCTATAAAAATCCAGTGTACGAAGACTTCAATTTCAC
A
GAGGCCCCCATGTTTACTCAACCTTTGGTTAACACCTATGCCATCGCTGGTTACAATGCCACCCTGAAC
TGC
AGCGTCCGAGGAAATCCCAAGCCCAAAATCACCTGGATGAAAAACAAAGTGGCTATTGTGGATGACC
CA
AGATACAGAATGTTCAGCAACCAAGGAGTCTGTACCCTGGAGATCCGCAAGCCTAGTCCTTATGACGG
A
GGCACGTACTGCTGCAAAGCAGTCAATGACCTCGGGACGGTGGAGATTGAATGCAAACTGGAGGTGAAA
G
TC
GTAGCACAGTAA


Translation (1124 aa):
MPEPTKKEENEVSAPAPPPEEPNKEKEAGTAPAKEWSLGESPAGGEEQDKQNANSQLSTLFVEKPQTGSV
K
V
GANITFVAKVRAEDLLRKPTVKWFKGKWMDLASKAGKHLQLKETFERQTRVYTFEMQIIKAKENYAGN
Y
RCEVTYKDKFDSCSFDLEVH
ESTGTTPNIDIRSAFKRSGEGQEDAGELDFSGLLKRREVKQQEEEPEID
V
WELLKNANPNEYEKIAFQYGITDLRGMLKRLKRMRRVEKKSA
AFAKILDPAYQVDKGGKVRFVVELADP
K
LEVKWFKNGQEIRPST
KYIFEHKGNERIMFINNCSLTDDSEYYVTAGDEKCSTELFVREPPIMVTKQLE
D
MNAYCGERVEMEVEVSEDDANVK
WFKNGEEIFPGPKSRYKIKVEGKKHTLIIEGATKADSAEYSAMTTG
G
QSSAKLSVD
LRPLKITTPLTDQTVKLGKEVCLKCEISENVPGKWTKNGLPVQEGERLKVVHKGRIHKLV
I
ANALIEDEGEYVFTPDAYNVPLSAKVHVI
DPPKIILDGLDADNTVTVIAGSKLRLEIPVTGEPPPKAIW
S
RADK
AIMEGSGRIRAESYPDSSTLVIDVAERDDSGVYNINLKNEAGEAHASIKIKVVDIPDPPVAPNVT
E
VGDDWCIMNWEPPAYDGGSPIL
GYFIERKKKQSSRWMRLNFDLCKETTFEPKKMIEGVAYEVRIFAVNA
I
GISKPSMPSKPFVPL
AVTSPPTLLAVDSVTDSSVTMKWRPPDQIGAAGLDGYVLEYCFEGTEDWIVANT
D
LIDKTKFTINGLPTDAKIFVRVKAINAAGASEPKYYSQPILVKEII
EPPKIRIPRHLKQTYIRRVGEAV
N
LVIPFQ
GKPRPELTWKKDGEEIDKNQINIRNSETDTIIFIRKAERSHSGKYDLQVKVDKYVENASIDIQ
I
V
DRPGPPQTVTIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTNATITELVI
G
NEYYFRVFAENMCGLSEDATMTKESAVIAKD
GKIYKNPVYEDFNFTEAPMFTQPLVNTYAIAGYNATLN
C
SVRGNPK
PKITWMKNKVAIVDDPRYRMFSNQGVCTLEIRKPSPYDGGTYCCKAVNDLGTVEIECKLEVK
V
VAQ



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser