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Report for CCDS48098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48098.1 Public Homo sapiens X KRBOX4 24 110 108 CCDS HistoryNCBI Gene:55634Re-query CCDS DB by CCDS ID:48098.1Re-query CCDS DB by GeneID:55634See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48098.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377919.6 ENSP00000367152.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377919.6Link to Ensembl Protein Viewer:ENSP00000367152.2Re-query CCDS DB by Nucleotide ID:ENST00000377919Re-query CCDS DB by Protein ID:ENSP00000367152
Original member Current member EBI ENST00000487081.1 ENSP00000418076.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000487081.1Link to Ensembl Protein Viewer:ENSP00000418076.1Re-query CCDS DB by Nucleotide ID:ENST00000487081Re-query CCDS DB by Protein ID:ENSP00000418076
Original member Current member NCBI NM_001129899.2 NP_001123371.1 Accepted alive Link to Nucleotide Sequence:NM_001129899.2Link to Protein Sequence:NP_001123371.1Re-query CCDS DB by Nucleotide ID:NM_001129899Re-query CCDS DB by Protein ID:NP_001123371Link to BLAST:NP_001123371.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123371.1 98 Q5JUW0-3 98 100% 0 0

Chromosomal Locations for CCDS 48098.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 46450461 46450475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46462748 46462874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46463198 46463308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 46471142 46471185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (297 nt):
ATGGCCATGTCCCAGGAATCATTGACCTTCAAGGACGTGTTTGTGGACTTCACCCTGGAGGAGTGGCAGC
AACTGGACTCTGCCCAGAAGAACCTCTACAGGGATGTCATGCTTGAGAACTACAGCCACCTGGTGTCCGT
GGGGTATCTAGTTGCGAAGCCAGATGTGATCTTCAGGTTGGGACCAGGTGAAGAGTCCTGGATGGCAGAT
GGGGGGACCCCGGTACGGACCTGTGCAGGTGAGGACAGGCCAGATGTATCCATTTTTGCCTCATGTATTT
TGAAGTGCTGTTATTAG

Translation (98 aa):
MAMSQESLTFKDVFVDFTLEEWQQLDSAQKNLYRDVMLENYSHLVSVGYLVAKPDVIFRLGPGEESWMAD
GGTPVRTCAGEDRPDVSIFASCILKCCY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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