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Report for CCDS47746.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47746.1 Public Homo sapiens 7 TMEM176B 24 110 108 CCDS HistoryNCBI Gene:28959Re-query CCDS DB by CCDS ID:47746.1Re-query CCDS DB by GeneID:28959See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47746.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450753.2 ENSP00000404831.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450753.2Link to Ensembl Protein Viewer:ENSP00000404831.2Re-query CCDS DB by Nucleotide ID:ENST00000450753Re-query CCDS DB by Protein ID:ENSP00000404831
Original member Current member NCBI NM_001101314.2 NP_001094784.1 Accepted alive Link to Nucleotide Sequence:NM_001101314.2Link to Protein Sequence:NP_001094784.1Re-query CCDS DB by Nucleotide ID:NM_001101314Re-query CCDS DB by Protein ID:NP_001094784Link to BLAST:NP_001094784.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094784.1 233 Q3YBM2-2 233 100% 0 0

Chromosomal Locations for CCDS 47746.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150791531 150791623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150792056 150792175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150793088 150793315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150793544 150793600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150796366 150796569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGACGCAAAACACGGTGATTGTGAATGGAGTTGCTATGGCCTCTAGGCCATCCCAGCCCACCCACGTCA
ACGTCCACATCCACCAGGAGTCAGCTTTGACACAACTGCTGAAAGCTGGAGGTTCTCTGAAGAAGTTTCT
TTTTCACCCTGGGGACACTGTGCCTTCCACAGCCAGGATTGGTTATGAGCAGCTGGCTCTAGGGGTGATC
GCAGCAGGAGCTGGGGCCATTGTCCATGAGAAGCACCCGGGCAAACTTGCTGGCTATATATCCAGCCTGC
TCACCCTGGCAGGCTTTGCTACAGCTATGGCTGCTGTTGTCCTCTGCGTGAATAGCTTCATCTGGCAAAC
TGAACCCTTTTTATACATCGACACTGTGTGTGATCGCTCAGACCCTGTCTTCCCTACCACTGGGTACAGA
TGGATGCGGCGAAGTCAAGAGAACCAATGGCAGAAGGAGGAGTGTAGAGCTTACATGCAGATGCTGAGGA
AGTTGTTCACAGCAATCCGTGCCCTGTTCCTGGCTGTCTGTGTCTTGAAGGTCATTGTGTCCTTGGTTTC
CTTGGGAGTAGGTCTTCGAAACTTGTGTGGCCAGAGCTCCCAGCCCCTGAATGAGGAAGGATCAGAGAAG
AGGCTACTGGGGGAGAATTCAGTGCCCCCTTCGCCCTCTAGGGAGCAGACCTCCACTGCCATTGTCCTGT
GA

Translation (233 aa):
MTQNTVIVNGVAMASRPSQPTHVNVHIHQESALTQLLKAGGSLKKFLFHPGDTVPSTARIGYEQLALGVI
AAGAGAIVHEKHPGKLAGYISSLLTLAGFATAMAAVVLCVNSFIWQTEPFLYIDTVCDRSDPVFPTTGYR
WMRRSQENQWQKEECRAYMQMLRKLFTAIRALFLAVCVLKVIVSLVSLGVGLRNLCGQSSQPLNEEGSEK
RLLGENSVPPSPSREQTSTAIVL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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