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Report for CCDS47512.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47512.1 Public Homo sapiens 6 FNDC1 24 110 108 CCDS HistoryNCBI Gene:84624Re-query CCDS DB by CCDS ID:47512.1Re-query CCDS DB by GeneID:84624See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47512.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297267.14 ENSP00000297267.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297267.14Link to Ensembl Protein Viewer:ENSP00000297267.9Re-query CCDS DB by Nucleotide ID:ENST00000297267Re-query CCDS DB by Protein ID:ENSP00000297267
Original member Current member NCBI NM_032532.3 NP_115921.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032532.3Link to Protein Sequence:NP_115921.2Re-query CCDS DB by Nucleotide ID:NM_032532Re-query CCDS DB by Protein ID:NP_115921Link to BLAST:NP_115921.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115921.2 1894 Q4ZHG4-1 1894 100% 0 0

Chromosomal Locations for CCDS 47512.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 159169597 159169705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159197431 159197625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159199996 159200082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159200513 159200581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159214945 159215151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159221598 159221696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159223528 159223645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159225535 159225722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159226473 159226580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159229815 159230003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159231882 159234479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159236215 159236315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159238554 159238665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159239517 159239957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159246901 159246969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159249039 159249182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159251302 159251532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159256523 159256631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159261190 159261269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159264975 159265004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159266084 159266245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159267804 159267926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159271327 159271442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5685 nt):
ATGGCCCCCGAGGCCGGGGCGACCCTGCGCGCGCCGCGCCGGCTGTCCTGGGCGGCGCTGCTGCTCTTGG
CCGCGCTGCTCCCCGTCGCCTCCTCGGCGGCGGCCTCAGTTGACCACCCACTGAAGCCAAGGCATGTGAA
ACTGCTGTCCACTAAAATGGGCCTGAAAGTCACGTGGGACCCACCCAAAGATGCTACCAGTAGACCTGTG
GAGCATTACAACATTGCCTATGGGAAGTCACTGAAAAGTCTTAAATACATCAAGGTGAATGCGGAGACAT
ACTCCTTCCTTATTGAGGATGTGGAGCCGGGGGTAGTGTACTTTGTGCTGCTTACTGCAGAAAACCACAG
TGGAGTGAGCCGTCCTGTTTACAGAGCTGAAAGCCCACCTGGAGGTGAATGGATCGAGATTGATGGTTTT
CCCATTAAGGGTCCAGGACCATTTAATGAAACCGTCACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTG
TGCGTGTCCGGTCCTCAGATGACAGGCTGTCCGTTGCGTGGAAGGCACCACGCCTGTCTGGAGCCAAGAG
TCCACGCAGATCACGGGGTTTTCTCCTGGGCTACGGGGAGAGTGGCCGGAAGATGAATTATGTTCCACTG
ACAAGAGATGAACGGACACACGAAATTAAAAAGCTAGCCTCGGAATCCGTGTATGTGGTCTCCCTGCAGT
CCATGAACTCTCAGGGCCGGAGCCAACCAGTCTACAGGGCTGCCCTAACAAAGCGAAAGATTTCAGAAGA
GGACGAATTGGATGTACCTGACGACATCAGCGTCCGGGTTATGTCATCTCAGTCTGTGCTTGTGTCCTGG
GTGGATCCTGTTCTGGAAAAACAGAAGAAAGTTGTTGCATCAAGACAGTACACCGTGCGCTATCGAGAGA
AGGGGGAATTGGCCAGGTGGGATTATAAGCAGATCGCTAACAGGCGTGTGCTGATTGAGAACCTGATTCC
AGACACTGTGTATGAATTTGCAGTCCGTATTTCACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAGTC
TTCCAAAGAACACCAGAATCTGCCCCTACCACAGCTCCTGAAAACTTGAACGTCTGGCCAGTCAATGGCA
AACCTACAGTTGTCGCTGCATCTTGGGATGCGCTACCAGAGACTGAGGGGAAAGTGAAAGAATACATTCT
TTCATACGCCCCGGCTCTCAAACCATTTGGAGCAAAGTCCCTCACCTATCCTGGAGACACTACTTCTGCC
CTGGTGGATGGTCTGCAGCCTGGGGAACGCTATCTTTTCAAAATCCGGGCCACAAACAGGAGAGGCCTGG
GACCTCACTCCAAAGCCTTCATTGTCGCTATGCCAACAACCAGTAAGGCGGATGTTGAGCAGAACACGGA
GGACAATGGGAAACCCGAAAAACCTGAGCCTTCCTCACCTTCTCCCAGAGCTCCAGCTTCCTCCCAACAC
CCCTCTGTGCCTGCTTCTCCCCAAGGGAGAAATGCCAAGGACCTTCTTCTTGACTTGAAGAACAAAATAT
TGGCTAATGGTGGGGCGCCCCGAAAACCCCAGCTTCGCGCCAAGAAGGCAGAGGAGCTGGATCTTCAGTC
GACAGAAATCACTGGGGAGGAGGAGCTGGGTTCCCGGGAGGACTCGCCCATGTCACCCTCAGACACCCAA
GACCAGAAACGGACCCTGAGGCCGCCAAGTAGACACGGCCACTCGGTGGTTGCTCCCGGCAGGACTGCAG
TGAGGGCCCGGATGCCAGCGCTGCCCCGAAGGGAAGGCGTAGATAAGCCTGGCTTTTCCCTGGCCACGCA
GCCCCGCCCAGGGGCGCCCCCCTCGGCTTCGGCCTCTCCTGCCCACCACGCGTCCACCCAGGGCACCTCT
CATCGTCCTTCCCTGCCTGCCAGCTTGAATGACAACGACTTGGTGGACTCAGACGAAGATGAGCGCGCTG
TGGGCTCCCTCCACCCCAAGGGCGCCTTCGCCCAGCCCCGGCCAGCCCTGTCCCCCAGCCGCCAGTCCCC
GTCCAGCGTTCTCCGCGACAGAAGCTCTGTGCACCCCGGCGCAAAGCCAGCCTCGCCGGCCCGGAGGACC
CCCCATTCAGGGGCCGCAGAGGAAGATTCCAGTGCCTCAGCCCCACCCTCAAGACTTTCTCCACCCCATG
GGGGATCATCTCGGCTGCTGCCCACCCAGCCACACCTGAGCTCTCCACTTTCCAAGGGCGGGAAGGATGG
TGAGGACGCCCCAGCCACCAACTCCAATGCGCCATCACGGTCCACCATGTCCTCCTCCGTCTCTTCTCAT
CTCTCGTCCAGGACGCAGGTCTCTGAGGGAGCGGAGGCTTCTGATGGTGAAAGCCACGGTGACGGCGATA
GGGAAGACGGCGGAAGGCAGGCGGAGGCCACGGCCCAGACGCTGCGGGCCCGGCCTGCCTCTGGACACTT
CCATTTGCTCAGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTCAGCATTGGGCGGGGA
CCTCGGCTGCAGCCCTCCAGCTCCCCACAGTCGACTGTGCCCTCCCGAGCCCACCCCAGGGTTCCCTCTC
ACTCTGATTCCCACCCTAAGCTTAGCTCAGGTATCCATGGAGACGAGGAGGATGAGAAGCCGCTTCCTGC
CACCGTTGTCAATGACCACGTGCCTTCCTCCTCCAGGCAGCCCATCTCCCGGGGCTGGGAGGACTTAAGG
AGAAGCCCGCAGAGAGGGGCCAGCCTGCATCGGAAGGAACCCATCCCAGAGAACCCCAAATCCACAGGGG
CAGATACACATCCTCAGGGCAAGTACTCCTCCCTGGCCTCCAAGGCTCAGGATGTTCAACAGAGCACAGA
CGCGGACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGCCACGCGTCCCCTGCTCGT
CCGCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAGAAGGATGACACCCGGCCGGGCCCCACAAC
AGCAGCCCCCTCCTCCCGTCGCCACGTCCCAGCACCACCCGGGACCCCAGAGCAGAGACGCGGGTCGGTC
ACCTTCCCAGCCCAGGCTCTCACTGACCCAGGCCGGGCGGCCCCGCCCCACGTCGCAGGGCCGCTCCCAC
TCCTCCTCGGACCCTTACACGGCGAGCTCCAGAGGGATGCTCCCCACGGCCCTCCAGAACCAGGACGAGG
ATGCCCAGGGCAGCTACGACGACGACAGCACAGAAGTCGAGGCCCAGGATGTGCGGGCCCCCGCGCACGC
CGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCTCCCACAGGCGCAGGG
GCAGGTGGCGACCACAGGTCCCAGCGCGGACATGCGGCCTCCCCCGCCAGGCCCAGCCGACCCGGCGGCC
CCCAGTCCCGCGCCCGGGTACCCAGCAGGGCAGCGCCGGGGAAGTCGGAGCCTCCTTCCAAGCGGCCCCT
GTCCTCCAAGTCCCAGCAGTCGGTCTCAGCCGAGGACGACGAGGAGGAGGACGCGGGATTTTTTAAAGGC
GGGAAAGAAGACCTTCTGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAG
ACGCCGATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTCGCGGAGGGAGCCT
GGCTCCTGTGAAGCGACCTCTCCCCCCACCTCCAGGCAGCTCCCCCAGGGCCTCCCACGTCCCTTCCCGA
CTGCCGCCTCGCAGCGCTGCCACCGTGAGCCCCGTCGCGGGCACCCACCCCTGGCCGCAGTACACCACGC
GCGCCCCACCTGGCCACTTCTCCACCACCCCGATGCTGTCCTTGCGCCAGAGGATGATGCATGCCAGATT
CCGTAACCCTCTCTCCCGACAGCCTGCCAGACCCTCTTACAGACAAGGTTATAATGGCAGACCAAATGTA
GAAGGGAAAGTCCTTCCTGGTAGTAATGGAAAACCGAATGGACAGAGAATTATCAATGGCCCTCAAGGAA
CAAAGTGGGTTGTGGACCTTGATCGTGGGTTAGTATTGAATGCAGAAGGAAGGTACCTCCAAGATTCACA
TGGAAATCCTCTTCGGATTAAACTAGGAGGAGATGGTCGAACCATTGTAGATCTGGAAGGGACCCCCGTG
GTGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGGCGACATGGCACACCTCTGGCCAATGCCCAAGATA
AGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGGTGGGCTTGGAGGTCATCAAAAAAACCACCCATCCCCC
TACCACTACCATGCAGCCCACCACTACTACGACGCCCCTGCCTACCACTACAACCCCGAGGCCCACCACT
GCCACCACCCGCCGCACGACCACCACCCGCCGCACGACCACCAGGCGTCCAACAACCACAGTCCGAACCA
CTACGCGGACAACCACCACCACCACCCCCACACCCACCACTCCCATCCCCACCTGTCCCCCTGGGACCTT
GGAACGGCACGACGATGATGGCAACCTGATAATGAGCTCCAATGGGATCCCAGAGTGCTACGCTGAAGAA
GATGAGTTCTCAGGCTTGGAGACTGACACTGCAGTACCTACGGAAGAGGCCTACGTTATATATGATGAAG
ATTATGAATTTGAGACGTCAAGGCCACCAACCACCACTGAGCCTTCGACCACTGCTACCACACCGAGGGT
GATCCCAGAGGAAGGCGCCATCAGTTCCTTTCCTGAAGAAGAATTTGATCTGGCTGGAAGGAAACGATTT
GTTGCTCCTTACGTGACGTACCTAAATAAAGACCCATCAGCCCCGTGCTCTCTGACTGATGCACTGGATC
ACTTCCAAGTGGACAGCCTGGATGAAATCATCCCCAATGACCTGAAGAAGAGTGACCTGCCTCCCCAGCA
TGCTCCCCGCAACATCACCGTGGTGGCCGTGGAAGGTTGCCACTCATTTGTCATTGTGGACTGGGACAAA
GCCACCCCAGGAGATGTGGTCACAGGTTACTTGGTTTACAGTGCATCCTATGAAGACTTCATCAGGAACA
AGTGGTCCACTCAAGCTTCATCAGTAACTCACTTGCCCATTGAGAACCTAAAGCCCAACACGAGGTATTA
TTTTAAAGTGCAAGCACAAAATCCTCATGGCTACGGACCTATCAGCCCTTCGGTCTCATTTGTCACCGAA
TCAGATAATCCTCTGCTTGTTGTGAGGCCCCCAGGCGGTGAGCCTATCTGGATCCCATTCGCTTTCAAAC
ATGATCCCAGCTACACGGACTGCCATGGACGGCAATATGTGAAGCGCACGTGGTATCGAAAGTTCGTGGG
AGTTGTTCTTTGTAATTCACTGAGGTATAAAATCTACCTCAGTGACAACCTGAAAGATACATTCTACAGC
ATTGGAGACAGCTGGGGAAGAGGTGAAGACCATTGCCAATTTGTGGATTCACACCTTGATGGAAGAACAG
GGCCTCAGTCCTATGTAGAAGCCCTCCCTACTATTCAAGGCTACTATCGCCAGTATCGTCAGGAGCCTGT
CAGGTTTGGGAACATCGGCTTCGGAACCCCCTACTACTATGTGGGCTGGTACGAGTGTGGGGTCTCCATC
CCTGGAAAGTGGTAA

Translation (1894 aa):
MAPEAGATLRAPRRLSWAALLLLAALLPVASSAAASVDHPLKPRHVKLLSTKMGLKVTWDPPKDATSRPV
EHYNIAYGKSLKSLKYIKVNAETYSFLIEDVEPGVVYFVLLTAENHSGVSRPVYRAESPPGGEWIEIDGF
PIKGPGPFNETVTEKEVPNKPLRVRVRSSDDRLSVAWKAPRLSGAKSPRRSRGFLLGYGESGRKMNYVPL
TRDERTHEIKKLASESVYVVSLQSMNSQGRSQPVYRAALTKRKISEEDELDVPDDISVRVMSSQSVLVSW
VDPVLEKQKKVVASRQYTVRYREKGELARWDYKQIANRRVLIENLIPDTVYEFAVRISQGERDGKWSTSV
FQRTPESAPTTAPENLNVWPVNGKPTVVAASWDALPETEGKVKEYILSYAPALKPFGAKSLTYPGDTTSA
LVDGLQPGERYLFKIRATNRRGLGPHSKAFIVAMPTTSKADVEQNTEDNGKPEKPEPSSPSPRAPASSQH
PSVPASPQGRNAKDLLLDLKNKILANGGAPRKPQLRAKKAEELDLQSTEITGEEELGSREDSPMSPSDTQ
DQKRTLRPPSRHGHSVVAPGRTAVRARMPALPRREGVDKPGFSLATQPRPGAPPSASASPAHHASTQGTS
HRPSLPASLNDNDLVDSDEDERAVGSLHPKGAFAQPRPALSPSRQSPSSVLRDRSSVHPGAKPASPARRT
PHSGAAEEDSSASAPPSRLSPPHGGSSRLLPTQPHLSSPLSKGGKDGEDAPATNSNAPSRSTMSSSVSSH
LSSRTQVSEGAEASDGESHGDGDREDGGRQAEATAQTLRARPASGHFHLLRHKPFAANGRSPSRFSIGRG
PRLQPSSSPQSTVPSRAHPRVPSHSDSHPKLSSGIHGDEEDEKPLPATVVNDHVPSSSRQPISRGWEDLR
RSPQRGASLHRKEPIPENPKSTGADTHPQGKYSSLASKAQDVQQSTDADTEGHSPKAQPGSTDRHASPAR
PPAARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAGRSPSQPRLSLTQAGRPRPTSQGRSH
SSSDPYTASSRGMLPTALQNQDEDAQGSYDDDSTEVEAQDVRAPAHAARAKEAAASLPKHQQVESPTGAG
AGGDHRSQRGHAASPARPSRPGGPQSRARVPSRAAPGKSEPPSKRPLSSKSQQSVSAEDDEEEDAGFFKG
GKEDLLSSSVPKWPSSSTPRGGKDADGSLAKEEREPAIALAPRGGSLAPVKRPLPPPPGSSPRASHVPSR
LPPRSAATVSPVAGTHPWPQYTTRAPPGHFSTTPMLSLRQRMMHARFRNPLSRQPARPSYRQGYNGRPNV
EGKVLPGSNGKPNGQRIINGPQGTKWVVDLDRGLVLNAEGRYLQDSHGNPLRIKLGGDGRTIVDLEGTPV
VSPDGLPLFGQGRHGTPLANAQDKPILSLGGKPLVGLEVIKKTTHPPTTTMQPTTTTTPLPTTTTPRPTT
ATTRRTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTPIPTCPPGTLERHDDDGNLIMSSNGIPECYAEE
DEFSGLETDTAVPTEEAYVIYDEDYEFETSRPPTTTEPSTTATTPRVIPEEGAISSFPEEEFDLAGRKRF
VAPYVTYLNKDPSAPCSLTDALDHFQVDSLDEIIPNDLKKSDLPPQHAPRNITVVAVEGCHSFVIVDWDK
ATPGDVVTGYLVYSASYEDFIRNKWSTQASSVTHLPIENLKPNTRYYFKVQAQNPHGYGPISPSVSFVTE
SDNPLLVVRPPGGEPIWIPFAFKHDPSYTDCHGRQYVKRTWYRKFVGVVLCNSLRYKIYLSDNLKDTFYS
IGDSWGRGEDHCQFVDSHLDGRTGPQSYVEALPTIQGYYRQYRQEPVRFGNIGFGTPYYYVGWYECGVSI
PGKW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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