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Report for CCDS4695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4695.1 Public Homo sapiens 6 CCHCR1 24 110 108 CCDS HistoryNCBI Gene:54535Re-query CCDS DB by CCDS ID:4695.1Re-query CCDS DB by GeneID:54535See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4695.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376266.9 ENSP00000365442.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376266.9Link to Ensembl Protein Viewer:ENSP00000365442.5Re-query CCDS DB by Nucleotide ID:ENST00000376266Re-query CCDS DB by Protein ID:ENSP00000365442
Original member Current member NCBI NM_001394642.1 NP_001381571.1 Accepted alive Link to Nucleotide Sequence:NM_001394642.1Link to Protein Sequence:NP_001381571.1Re-query CCDS DB by Nucleotide ID:NM_001394642Re-query CCDS DB by Protein ID:NP_001381571Link to BLAST:NP_001381571.1
Original member Current member NCBI NM_001394643.1 NP_001381572.1 Accepted alive Link to Nucleotide Sequence:NM_001394643.1Link to Protein Sequence:NP_001381572.1Re-query CCDS DB by Nucleotide ID:NM_001394643Re-query CCDS DB by Protein ID:NP_001381572Link to BLAST:NP_001381572.1
Original member Current member NCBI NM_001394644.1 NP_001381573.1 Accepted alive Link to Nucleotide Sequence:NM_001394644.1Link to Protein Sequence:NP_001381573.1Re-query CCDS DB by Nucleotide ID:NM_001394644Re-query CCDS DB by Protein ID:NP_001381573Link to BLAST:NP_001381573.1
Original member Current member NCBI NM_019052.4 NP_061925.2 Accepted alive Link to Nucleotide Sequence:NM_019052.4Link to Protein Sequence:NP_061925.2Re-query CCDS DB by Nucleotide ID:NM_019052Re-query CCDS DB by Protein ID:NP_061925Link to BLAST:NP_061925.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381571.1 782 Q8TD31-1 782 100% 0 0
NP_001381572.1 782 Q8TD31-1 782 100% 0 0
NP_001381573.1 782 Q8TD31-1 782 100% 0 0
NP_061925.2 782 Q8TD31-1 782 100% 0 0

Chromosomal Locations for CCDS 4695.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31142592 31142716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31142963 31143134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31143262 31143413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31144687 31144788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31144885 31145073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31145166 31145302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31145448 31145493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31145696 31145808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31148405 31148511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31148618 31148728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31150066 31150215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31150455 31150565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31150725 31150860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31150959 31151122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31154496 31154799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31156731 31156944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31157023 31157038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2349 nt):
ATGTTTCCACCTTCAGGTTCCACTGGGCTGATTCCCCCCTCCCACTTTCAAGCTCGGCCCCTTTCAACTC
TGCCAAGAATGGCTCCCACCTGGCTCTCAGACATTCCCCTGGTCCAACCCCCAGGCCATCAAGATGTCTC
AGAGAGGCGGCTAGACACCCAGAGACCTCAAGTGACCATGTGGGAACGGGATGTTTCCAGTGACAGGCAG
GAGCCAGGGCGGAGAGGCAGGTCCTGGGGGCTGGAGGGGTCACAGGCCCTGAGCCAGCAGGCTGAGGTGA
TCGTTCGGCAGCTGCAAGAGCTGCGGCGGCTGGAGGAGGAGGTCCGGCTCCTGCGGGAGACCTCGCTGCA
GCAGAAGATGAGGCTAGAGGCCCAGGCCATGGAGCTAGAGGCTCTGGCACGGGCGGAGAAGGCCGGCCGA
GCTGAGGCTGAGGGCCTGCGTGCTGCTTTGGCTGGGGCTGAGGTTGTCCGGAAGAACTTGGAAGAGGGGA
GCCAGCGGGAGCTGGAAGAGGTTCAGAGGCTGCACCAAGAGCAGCTGTCCTCTTTGACACAGGCTCACGA
GGAGGCTCTTTCCAGTTTGACCAGCAAGGCTGAGGGCTTGGAGAAGTCTCTGAGTAGTCTGGAAACCAGA
AGAGCAGGGGAAGCCAAGGAGCTGGCCGAGGCTCAGAGGGAGGCCGAGCTGCTTCGGAAGCAGCTGAGCA
AGACCCAGGAAGACTTGGAGGCTCAGGTGACCCTGGTTGAGAATCTAAGAAAATATGTTGGGGAACAAGT
GCCTTCTGAGGTCCACAGCCAGACATGGGAACTGGAGCGACAGAAGCTTCTGGAAACCATGCAGCACTTG
CAGGAGGACCGGGACAGCCTGCATGCCACCGCGGAGCTGCTGCAGGTGCGGGTGCAGAGCCTCACACACA
TCCTCGCCCTGCAGGAGGAGGAGCTGACCAGGAAGGTTCAACCTTCAGATTCCCTGGAGCCTGAGTTTAC
CAGGAAGTGCCAGTCCCTGCTGAACCGCTGGCGGGAGAAGGTGTTTGCCCTCATGGTGCAGCTAAAGGCC
CAGGAGCTGGAACACAGTGACTCTGTTAAGCAGCTGAAGGGACAGGTGGCCTCACTCCAGGAAAAAGTGA
CATCCCAGAGCCAGGAGCAGGCCATCCTGCAGCGATCCCTGCAGGACAAAGCCGCAGAGGTGGAGGTGGA
GCGTATGGGTGCCAAGGGCCTGCAGTTGGAGCTGAGCCGTGCTCAGGAGGCCAGGCGTCGGTGGCAGCAG
CAGACAGCCTCAGCCGAGGAGCAGCTGAGGCTTGTGGTCAATGCTGTCAGCAGCTCTCAGATCTGGCTCG
AGACCACCATGGCTAAGGTGGAAGGGGCTGCCGCCCAGCTTCCCAGCCTCAACAACCGACTCAGCTATGC
TGTCCGCAAGGTCCACACCATTCGGGGCCTGATTGCTCGAAAGCTTGCCCTTGCTCAGCTGCGCCAGGAG
AGCTGTCCCCTACCACCACCGGTCACAGACGTGAGCCTTGAGTTGCAGCAGTTGCGGGAAGAACGGAACC
GCCTGGATGCAGAACTGCAGCTGAGTGCCCGCCTCATCCAGCAGGAGGTGGGCCGGGCTCGGGAGCAAGG
GGAGGCAGAGCGGCAGCAGCTGAGCAAGGTGGCCCAGCAGCTGGAGCAGGAGCTGCAGCAGACCCAGGAG
TCCCTGGCTAGCTTGGGGCTGCAGCTGGAGGTAGCACGCCAGGGCCAGCAGGAGAGCACAGAGGAGGCTG
CCAGTCTGCGGCAGGAGCTGACCCAGCAGCAGGAACTCTACGGGCAAGCCCTGCAAGAAAAGGTGGCTGA
AGTGGAAACTCGGCTGCGGGAGCAACTCTCAGACACAGAGAGGAGGCTGAACGAGGCTCGGAGGGAGCAT
GCCAAGGCCGTGGTCTCCTTACGCCAGATTCAGCGCAGAGCCGCCCAGGAAAAGGAGCGGAGCCAGGAAC
TCAGGCGTCTGCAGGAGGAGGCCCGGAAGGAGGAGGGGCAGCGACTGGCCCGGCGCTTGCAGGAGCTAGA
GAGGGATAAGAACCTCATGCTGGCCACCTTGCAGCAGGAAGGTCTCCTCTCCCGTTACAAGCAGCAGCGA
CTGTTGACAGTTCTTCCTTCCCTACTGGATAAGAAGAAATCTGTGGTGTCCAGCCCCAGGCCTCCAGAGT
GTTCAGCATCTGCACCTGTAGCAGCAGCAGTGCCCACCAGGGAGTCCATAAAAGGGTCCCTCTCTGTCCT
GCTCGATGACCTGCAGGACCTGAGTGAAGCCATTTCCAAAGAGGAAGCTGTTTGTCAAGGAGACAACCTT
GACAGATGCTCCAGCTCCAATCCCCAGATGAGCAGCTAA

Translation (782 aa):
MFPPSGSTGLIPPSHFQARPLSTLPRMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQ
EPGRRGRSWGLEGSQALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGR
AEAEGLRAALAGAEVVRKNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLETR
RAGEAKELAEAQREAELLRKQLSKTQEDLEAQVTLVENLRKYVGEQVPSEVHSQTWELERQKLLETMQHL
QEDRDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFALMVQLKA
QELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKGLQLELSRAQEARRRWQQ
QTASAEEQLRLVVNAVSSSQIWLETTMAKVEGAAAQLPSLNNRLSYAVRKVHTIRGLIARKLALAQLRQE
SCPLPPPVTDVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQE
SLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDTERRLNEARREH
AKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQR
LLTVLPSLLDKKKSVVSSPRPPECSASAPVAAAVPTRESIKGSLSVLLDDLQDLSEAISKEEAVCQGDNL
DRCSSSNPQMSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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