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Report for CCDS46894.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46894.1 Public Homo sapiens 3 PARP14 24 110 108 CCDS HistoryNCBI Gene:54625Re-query CCDS DB by CCDS ID:46894.1Re-query CCDS DB by GeneID:54625See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46894.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000474629.7 ENSP00000418194.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000474629.7Link to Ensembl Protein Viewer:ENSP00000418194.2Re-query CCDS DB by Nucleotide ID:ENST00000474629Re-query CCDS DB by Protein ID:ENSP00000418194
Original member Current member NCBI NM_017554.3 NP_060024.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017554.3Link to Protein Sequence:NP_060024.2Re-query CCDS DB by Nucleotide ID:NM_017554Re-query CCDS DB by Protein ID:NP_060024Link to BLAST:NP_060024.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060024.2 1801 Q460N5-6 1801 100% 0 0

Chromosomal Locations for CCDS 46894.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 122680884 122681070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122685185 122685318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122687080 122687113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122692301 122692543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122695426 122695662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122699390 122701635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122703742 122703978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122704527 122704748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122708190 122708268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122713424 122713573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122713872 122713934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122714262 122714429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122718071 122718277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122718359 122718958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122720255 122720388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122727812 122727986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122728308 122728597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5406 nt):
ATGGCTGTGCCCGGCTCCTTCCCGCTGCTGGTCGAGGGCTCCTGGGGCCCCGACCCCCCGAAGAACTTGA
ACACCAAGTTGCAGATGTACTTCCAGAGCCCGAAGAGGTCGGGAGGCGGCGAGTGTGAGGTCCGCCAGGA
TCCCAGGAGCCCATCCCGCTTCCTGGTGTTCTTCTACCCGGAGGACGTTCGGCAGAAGGTTCTGGAGAGA
AAAAATCATGAGTTGGTATGGCAAGGAAAAGGAACATTCAAGTTAACTGTCCAGTTACCTGCAACCCCAG
ATGAAATCGATCATGTCTTTGAAGAGGAACTTCTAACAAAAGAATCCAAGACCAAAGAAGATGTTAAAGA
ACCAGATGTGTCAGAAGAATTGGATACAAAACTCCCTCTTGATGGTGGATTAGACAAAATGGAAGATATC
CCAGAGGAATGTGAAAATATTTCCTCTTTGGTGGCATTTGAAAACCTCAAGGCAAATGTGACTGACATAA
TGCTAATCTTGTTAGTGGAGAACATAAGTGGCCTGTCTAATGATGACTTTCAAGTGGAAATAATAAGAGA
TTTTGATGTTGCTGTTGTTACCTTTCAAAAGCACATAGATACTATAAGATTTGTTGATGATTGTACCAAG
CACCATTCAATTAAACAACTTCAGCTTTCTCCAAGACTTCTGGAAGTGACAAACACAATCAGGGTTGAAA
ACCTGCCACCTGGTGCTGATGACTACAGTTTAAAACTTTTCTTTGAAAATCCCTATAATGGAGGGGGAAG
AGTTGCCAATGTTGAATATTTTCCTGAAGAGAGTTCAGCTCTGATTGAATTTTTTGACAGAAAAGTGTTA
GACACCATCATGGCCACAAAACTCGACTTCAATAAAATGCCACTTTCTGTGTTCCCATACTATGCCTCAT
TGGGCACAGCCTTGTATGGAAAGGAGAAGCCTCTGATCAAGCTTCCAGCACCATTTGAAGAGTCACTAGA
TCTTCCCTTATGGAAGTTCTTACAGAAAAAGAATCACCTCATTGAGGAGATAAACGATGAAATGAGGCGT
TGTCACTGTGAGCTCACGTGGTCCCAACTCAGTGGTAAAGTTACCATCAGACCAGCAGCCACCTTAGTCA
ATGAAGGAAGACCGAGAATCAAGACCTGGCAGGCAGATACTTCCACAACACTCTCTAGCATCAGGTCTAA
ATATAAAGTCAACCCAATTAAAGTGGATCCAACAATGTGGGACACCATAAAAAATGATGTGAAAGATGAC
AGGATTTTGATTGAGTTTGATACACTTAAGGAGATGGTAATCTTAGCAGGGAAATCAGAGGATGTCCAAA
GCATTGAGGTACAAGTCAGGGAGTTAATAGAAAGCACTACTCAAAAAATTAAAAGGGAAGAGCAAAGTTT
GAAGGAAAAAATGATCATTTCTCCAGGCAGGTATTTTCTTTTGTGTCACAGCAGTCTACTGGACCATTTA
CTCACGGAGTGCCCAGAGATAGAGATTTGTTACGATAGAGTCACTCAACACTTGTGCTTGAAAGGACCTA
GTGCAGATGTGTATAAAGCAAAGTGTGAAATCCAGGAAAAGGTGTACACCATGGCTCAGAAAAACATTCA
GGTTTCTCCTGAGATTTTTCAGTTTTTGCAACAGGTAAACTGGAAAGAATTCTCTAAGTGTCTTTTCATA
GCACAGAAGATTCTTGCACTTTATGAGCTAGAGGGTACAACTGTTCTCTTAACCAGCTGTTCTTCTGAAG
CCCTGTTAGAAGCAGAAAAGCAAATGCTCAGTGCCTTAAATTATAAGCGCATTGAAGTTGAGAACAAAGA
AGTTCTTCATGGCAAGAAATGGAAAGGGCTCACTCACAATTTGCTTAAGAAACAAAATTCCTCCCCAAAC
ACTGTAATCATCAATGAGTTAACTTCAGAAACCACAGCTGAAGTCATCATTACAGGCTGTGTAAAAGAAG
TAAATGAAACCTATAAATTGCTTTTTAACTTCGTTGAACAAAACATGAAAATAGAGAGACTGGTTGAAGT
AAAGCCTTCCTTAGTTATTGACTATTTAAAGACAGAAAAGAAGCTATTCTGGCCAAAGATAAAGAAGGTA
AATGTGCAGGTAAGTTTCAATCCTGAGAACAAACAAAAAGGCATTTTACTAACTGGCTCAAAGACCGAAG
TACTGAAGGCAGTGGACATTGTCAAGCAAGTCTGGGATTCAGTCTGTGTTAAAAGTGTCCATACTGATAA
GCCAGGAGCCAAGCAGTTCTTCCAGGATAAAGCACGGTTTTATCAAAGTGAGATCAAACGGTTGTTTGGT
TGTTACATTGAACTACAGGAGAATGAAGTAATGAAGGAGGGAGGCAGCCCCGCTGGGCAGAAGTGCTTCT
CTCGGACAGTCTTGGCCCCTGGCGTTGTGCTGATTGTGCAGCAGGGTGACTTGGCACGGCTTCCTGTCGA
TGTGGTGGTGAATGCATCTAATGAGGACCTTAAGCATTATGGTGGCCTGGCCGCTGCGCTCTCAAAAGCA
GCTGGCCCTGAGCTCCAGGCCGACTGTGACCAGATAGTGAAGAGAGAGGGCAGACTCCTACCGGGCAATG
CCACCATCTCCAAGGCAGGAAAGCTGCCCTACCACCACGTGATCCATGCAGTGGGGCCCCGCTGGAGCGG
ATATGAGGCCCCGAGGTGTGTGTACCTATTAAGGAGAGCTGTGCAACTCAGTCTCTGTCTAGCCGAAAAA
TACAAGTACCGATCCATAGCCATCCCAGCTATTAGTTCTGGAGTCTTTGGCTTTCCCTTAGGCCGATGCG
TGGAGACCATTGTTTCTGCCATCAAGGAAAACTTCCAATTCAAGAAGGATGGACACTGCTTGAAAGAAAT
CTACCTTGTGGATGTATCTGAGAAGACTGTTGAGGCCTTTGCAGAAGCTGTGAAAACTGTATTTAAAGCC
ACCCTGCCAGATACAGCTGCCCCGCCAGGTTTACCACCAGCAGCAGCGGGGCCTGGGAAAACATCATGGG
AAAAAGGAAGCCTGGTGTCCCCGGGAGGCCTGCAGATGCTGTTGGTGAAAGAGGGTGTGCAGAATGCTAA
GACCGATGTTGTTGTCAACTCCGTTCCCTTGGATCTCGTGCTTAGTAGAGGGCCTCTTTCTAAGTCCCTC
TTGGAAAAAGCTGGACCAGAGCTCCAGGAGGAATTGGACACAGTTGGACAAGGGGTGGCTGTCAGCATGG
GCACAGTGCTCAAAACCAGCAGCTGGAATCTGGACTGTCGCTATGTGCTTCACGTGGTAGCTCCGGAGTG
GAGAAATGGTAGCACATCTTCACTCAAGATAATGGAAGACATAATCAGAGAATGTATGGAGATCACTGAG
AGCTTGTCCTTAAAATCAATTGCATTTCCAGCAATAGGAACAGGAAACTTGGGATTTCCTAAAAACATAT
TCGCTGAATTAATCATTTCAGAGGTGTTCAAATTTAGTAGCAAGAATCAGCTGAAAACTTTACAAGAGGT
TCACTTTCTGCTGCACCCGAGTGATCATGAAAATATTCAGGCATTTTCAGATGAATTTGCCAGAAGGGCT
AATGGAAATCTCGTCAGTGACAAAATTCCGAAGGCTAAAGATACACAAGGTTTTTATGGGACTGTTTCTA
GCCCTGATTCAGGTGTGTATGAAATGAAGATTGGCTCCATCATCTTCCAGGTGGCTTCTGGAGATATCAC
GAAAGAAGAGGCAGATGTGATTGTAAATTCAACATCAAACTCATTCAATCTCAAAGCAGGGGTCTCCAAA
GCAATTTTAGAATGTGCTGGACAAAATGTAGAAAGGGAATGTTCTCAGCAAGCTCAGCAGCGCAAAAATG
ATTATATAATCACCGGAGGTGGATTTTTGAGGTGCAAGAATATCATTCATGTAATTGGTGGAAATGATGT
CAAGAGTTCAGTTTCCTCTGTTTTGCAGGAGTGTGAAAAAAAAAATTACTCATCCATTTGCCTCCCAGCC
ATTGGGACAGGAAATGCCAAACAACACCCAGATAAGGTTGCTGAAGCCATAATTGATGCCATTGAAGACT
TTGTCCAGAAAGGATCAGCCCAGTCTGTGAAAAAAGTTAAAGTTGTTATCTTTCTGCCTCAAGTACTGGA
TGTGTTTTATGCCAACATGAAGAAAAGAGAAGGGACTCAGCTTTCTTCCCAACAGTCTGTGATGTCTAAA
CTTGCATCATTTTTGGGCTTTTCAAAGCAATCTCCCCAAAAAAAGAATCATTTGGTTTTGGAAAAGAAAA
CAGAATCAGCAACTTTTCGGGTGTGTGGTGAAAATGTCACGTGTGTGGAATATGCTATCTCCTGGCTACA
AGACCTGATTGAAAAAGAACAGTGTCCTTACACCAGTGAAGATGAGTGCATCAAAGACTTTGATGAAAAG
GAGTATCAGGAGTTGAATGAGCTGCAGAAGAAGTTAAATATTAACATTTCCCTGGACCATAAGAGACCTT
TGATTAAGGTTTTGGGAATTAGCAGAGATGTGATGCAGGCTAGAGATGAAATTGAGGCGATGATCAAGAG
AGTTCGATTGGCCAAAGAACAGGAATCCCGGGCAGATTGTATCAGTGAGTTTATAGAATGGCAGTATAAT
GACAATAACACTTCTCATTGTTTTAACAAAATGACCAATCTGAAATTAGAGGATGCAAGGAGAGAAAAGA
AAAAAACAGTTGATGTCAAAATTAATCATCGGCACTACACAGTGAACTTGAACACATACACTGCCACAGA
CACAAAGGGCCACAGTTTATCTGTTCAGCGCCTCACGAAATCCAAAGTTGACATCCCTGCACACTGGAGT
GATATGAAGCAGCAGAATTTCTGTGTGGTGGAGCTGCTGCCTAGTGATCCTGAGTACAACACGGTGGCAA
GCAAGTTTAATCAGACCTGCTCACACTTCAGAATAGAGAAGATTGAGAGGATCCAGAATCCAGATCTCTG
GAATAGCTACCAGGCAAAGAAAAAAACTATGGATGCCAAGAATGGCCAGACAATGAATGAGAAGCAACTC
TTCCATGGGACAGATGCCGGCTCCGTGCCACACGTCAATCGAAATGGCTTTAACCGCAGCTATGCCGGAA
AGAATGCTGTGGCATATGGAAAGGGAACCTATTTTGCTGTCAATGCCAATTATTCTGCCAATGATACGTA
CTCCAGACCAGATGCAAATGGGAGAAAGCATGTGTATTATGTGCGAGTACTTACTGGAATCTATACACAT
GGAAATCATTCATTAATTGTGCCTCCTTCAAAGAACCCTCAAAATCCTACTGACCTGTATGACACTGTCA
CAGATAATGTGCACCATCCAAGTTTATTTGTGGCATTTTATGACTACCAAGCATACCCAGAGTACCTTAT
TACGTTTAGAAAATAA

Translation (1801 aa):
MAVPGSFPLLVEGSWGPDPPKNLNTKLQMYFQSPKRSGGGECEVRQDPRSPSRFLVFFYPEDVRQKVLER
KNHELVWQGKGTFKLTVQLPATPDEIDHVFEEELLTKESKTKEDVKEPDVSEELDTKLPLDGGLDKMEDI
PEECENISSLVAFENLKANVTDIMLILLVENISGLSNDDFQVEIIRDFDVAVVTFQKHIDTIRFVDDCTK
HHSIKQLQLSPRLLEVTNTIRVENLPPGADDYSLKLFFENPYNGGGRVANVEYFPEESSALIEFFDRKVL
DTIMATKLDFNKMPLSVFPYYASLGTALYGKEKPLIKLPAPFEESLDLPLWKFLQKKNHLIEEINDEMRR
CHCELTWSQLSGKVTIRPAATLVNEGRPRIKTWQADTSTTLSSIRSKYKVNPIKVDPTMWDTIKNDVKDD
RILIEFDTLKEMVILAGKSEDVQSIEVQVRELIESTTQKIKREEQSLKEKMIISPGRYFLLCHSSLLDHL
LTECPEIEICYDRVTQHLCLKGPSADVYKAKCEIQEKVYTMAQKNIQVSPEIFQFLQQVNWKEFSKCLFI
AQKILALYELEGTTVLLTSCSSEALLEAEKQMLSALNYKRIEVENKEVLHGKKWKGLTHNLLKKQNSSPN
TVIINELTSETTAEVIITGCVKEVNETYKLLFNFVEQNMKIERLVEVKPSLVIDYLKTEKKLFWPKIKKV
NVQVSFNPENKQKGILLTGSKTEVLKAVDIVKQVWDSVCVKSVHTDKPGAKQFFQDKARFYQSEIKRLFG
CYIELQENEVMKEGGSPAGQKCFSRTVLAPGVVLIVQQGDLARLPVDVVVNASNEDLKHYGGLAAALSKA
AGPELQADCDQIVKREGRLLPGNATISKAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEK
YKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQFKKDGHCLKEIYLVDVSEKTVEAFAEAVKTVFKA
TLPDTAAPPGLPPAAAGPGKTSWEKGSLVSPGGLQMLLVKEGVQNAKTDVVVNSVPLDLVLSRGPLSKSL
LEKAGPELQEELDTVGQGVAVSMGTVLKTSSWNLDCRYVLHVVAPEWRNGSTSSLKIMEDIIRECMEITE
SLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFKFSSKNQLKTLQEVHFLLHPSDHENIQAFSDEFARRA
NGNLVSDKIPKAKDTQGFYGTVSSPDSGVYEMKIGSIIFQVASGDITKEEADVIVNSTSNSFNLKAGVSK
AILECAGQNVERECSQQAQQRKNDYIITGGGFLRCKNIIHVIGGNDVKSSVSSVLQECEKKNYSSICLPA
IGTGNAKQHPDKVAEAIIDAIEDFVQKGSAQSVKKVKVVIFLPQVLDVFYANMKKREGTQLSSQQSVMSK
LASFLGFSKQSPQKKNHLVLEKKTESATFRVCGENVTCVEYAISWLQDLIEKEQCPYTSEDECIKDFDEK
EYQELNELQKKLNINISLDHKRPLIKVLGISRDVMQARDEIEAMIKRVRLAKEQESRADCISEFIEWQYN
DNNTSHCFNKMTNLKLEDARREKKKTVDVKINHRHYTVNLNTYTATDTKGHSLSVQRLTKSKVDIPAHWS
DMKQQNFCVVELLPSDPEYNTVASKFNQTCSHFRIEKIERIQNPDLWNSYQAKKKTMDAKNGQTMNEKQL
FHGTDAGSVPHVNRNGFNRSYAGKNAVAYGKGTYFAVNANYSANDTYSRPDANGRKHVYYVRVLTGIYTH
GNHSLIVPPSKNPQNPTDLYDTVTDNVHHPSLFVAFYDYQAYPEYLITFRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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