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Report for CCDS4681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4681.1 Public Homo sapiens 6 PPP1R10 24 110 108 CCDS HistoryNCBI Gene:5514Re-query CCDS DB by CCDS ID:4681.1Re-query CCDS DB by GeneID:5514See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4681.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376511.7 ENSP00000365694.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376511.7Link to Ensembl Protein Viewer:ENSP00000365694.2Re-query CCDS DB by Nucleotide ID:ENST00000376511Re-query CCDS DB by Protein ID:ENSP00000365694
Original member Current member NCBI NM_001376195.1 NP_001363124.1 Accepted alive Link to Nucleotide Sequence:NM_001376195.1Link to Protein Sequence:NP_001363124.1Re-query CCDS DB by Nucleotide ID:NM_001376195Re-query CCDS DB by Protein ID:NP_001363124Link to BLAST:NP_001363124.1
Original member Current member NCBI NM_002714.4 NP_002705.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002714.4Link to Protein Sequence:NP_002705.2Re-query CCDS DB by Nucleotide ID:NM_002714Re-query CCDS DB by Protein ID:NP_002705Link to BLAST:NP_002705.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363124.1 940 Q96QC0 940 100% 0 0
NP_002705.2 940 Q96QC0 940 100% 0 0

Chromosomal Locations for CCDS 4681.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 30601549 30601658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30601936 30602691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30602846 30602959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30603210 30603285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30603472 30603666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30603780 30603843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30604008 30604254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30604353 30604511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30604588 30604735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30604994 30605094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30605923 30606035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30606138 30606243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30606468 30606641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30606779 30606856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30607840 30607891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30608779 30608914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30609077 30609163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30609838 30609944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2823 nt):
ATGGGTTCGGGTCCCATAGACCCCAAAGAACTTCTCAAGGGCCTGGACAGCTTCCTTAACCGAGATGGGG
AAGTCAAAAGTGTGGATGGGATTTCCAAGATCTTCAGTTTGATGAAGGAAGCACGAAAGATGGTGAGTCG
ATGCACTTACTTGAACATTCTCCTGCAGACCCGTTCACCAGAAATATTGGTCAAATTTATTGACGTTGGC
GGCTACAAACTTCTTAACAATTGGCTGACGTATTCAAAGACAACCAACAACATTCCCCTCCTCCAGCAAA
TTCTACTGACCCTGCAGCATCTACCGCTCACTGTAGACCATCTCAAGCAGAACAACACAGCTAAACTGGT
GAAGCAGCTGAGCAAGTCAAGTGAGGATGAAGAGCTCCGGAAATTGGCCTCAGTCCTTGTCAGCGACTGG
ATGGCTGTCATCCGCTCTCAGAGCAGTACCCAGCCTGCTGAGAAAGATAAGAAGAAACGTAAAGATGAAG
GAAAAAGTCGAACTACCCTTCCTGAGCGACCTTTGACAGAGGTGAAGGCTGAGACCCGGGCTGAGGAGGC
CCCAGAGAAGAAGAGGGAGAAGCCCAAGTCTCTTCGCACCACAGCACCCAGTCATGCCAAGTTCCGTTCC
ACTGGACTAGAGCTGGAGACACCATCCTTGGTGCCTGTGAAGAAGAATGCCAGCACAGTGGTGGTTTCTG
ACAAGTACAACCTTAAACCCATCCCCCTCAAACGTCAGAGCAACGTAGCTGCTCCAGGAGATGCCACTCC
CCCTGCAGAGAAGAAATACAAGCCACTCAACACAACACCTAATGCCACCAAAGAGATCAAAGTGAAGATC
ATCCCGCCACAGCCTATGGAGGGCCTGGGCTTTCTGGATGCTCTTAATTCAGCCCCTGTTCCAGGCATCA
AAATTAAGAAGAAAAAAAAAGTACTGTCACCTACGGCTGCCAAGCCAAGCCCCTTTGAAGGGAAAACGAG
CACAGAACCAAGCACAGCCAAACCTTCTTCCCCAGAACCAGCACCACCTTCTGAGGCAATGGACGCAGAC
CGTCCAGGCACCCCGGTTCCCCCTGTTGAAGTCCCGGAGCTCATGGATACAGCCTCTTTGGAGCCAGGAG
CTCTGGATGCCAAGCCAGTGGAGAGTCCTGGAGATCCTAACCAACTGACCCGGAAAGGCAGGAAGAGGAA
AAGTGTGACATGGCCTGAGGAAGGCAAACTGAGAGAATATTTCTATTTTGAATTGGATGAAACTGAACGA
GTAAATGTGAATAAGATCAAGGACTTTGGTGAGGCGGCTAAGCGAGAGATACTGTCAGACCGACATGCAT
TTGAGACAGCGCGGCGTCTGAGCCATGATAACATGGAGGAGAAGGTGCCCTGGGTGTGCCCCCGGCCCCT
GGTTCTGCCCTCACCTCTTGTCACCCCTGGAAGCAATAGTCAGGAGCGATATATCCAGGCTGAGCGGGAG
AAGGGAATCCTTCAGGAGCTCTTCCTGAACAAGGAGAGTCCTCATGAGCCTGATCCTGAGCCCTACGAGC
CCATACCCCCTAAACTCATCCCCCTAGATGAGGAGTGTTCCATGGATGAGACTCCGTATGTTGAGACTCT
GGAACCTGGGGGGTCAGGTGGCTCACCTGATGGGGCAGGAGGCTCCAAGTTGCCTCCAGTTCTGGCCAAT
CTTATGGGAAGCATGGGTGCTGGAAAGGGCCCCCAAGGCCCTGGAGGAGGAGGCATTAATGTCCAAGAGA
TCCTCACCTCCATCATGGGTAGCCCAAACAGTCATCCTTCAGAGGAACTACTGAAACAACCAGACTATTC
GGACAAGATCAAGCAGATGCTGGTGCCACATGGACTCCTAGGCCCTGGCCCAATAGCCAATGGTTTCCCA
CCAGGGGGTCCTGGGGGCCCCAAGGGCATGCAGCACTTTCCCCCTGGACCTGGGGGACCTATGCCAGGTC
CCCATGGAGGCCCTGGTGGGCCAGTGGGTCCACGTCTTCTGGGTCCTCCACCCCCTCCCCGGGGAGGTGA
TCCCTTCTGGGATGGCCCGGGCGACCCTATGCGGGGTGGCCCAATGCGGGGGGGTCCAGGACCAGGTCCT
GGACCATACCATAGAGGCCGAGGTGGCCGAGGAGGAAACGAACCTCCTCCTCCTCCTCCTCCATTCCGAG
GCGCCAGAGGAGGTCGCTCTGGAGGAGGACCCCCAAATGGACGAGGGGGCCCTGGTGGGGGCATGGTTGG
AGGTGGTGGGCATCGTCCTCACGAAGGCCCTGGTGGGGGCATGGGCAACAGCAGTGGACATCGTCCCCAC
GAAGGCCCTGGCGGTGGCATGGGAAGTGGGCATCGCCCCCATGAAGGCCCTGGTGGTAGCATGGGTGGGG
GTGGAGGACATCGTCCCCACGAAGGCCCTGGCGGTGGCATCAGTGGTGGCAGTGGCCATCGTCCCCATGA
AGGCCCTGGCGGAGGAATGGGTGCCGGTGGTGGACATCGCCCCCACGAAGGCCCTGGCGGAAGCATGGGT
GGAAGTGGTGGACATCGTCCCCATGAAGGCCCTGGACACGGGGGGCCCCATGGCCACCGGCCTCATGATG
TCCCTGGTCACCGAGGCCATGACCATCGAGGGCCGCCACCTCATGAGCACCGTGGCCATGATGGTCCTGG
CCACGGGGGAGGGGGCCACCGAGGGCACGATGGAGGCCACAGCCATGGAGGAGACATGTCAAACCGCCCT
GTCTGCCGACATTTCATGATGAAGGGCAACTGCCGCTATGAGAACAACTGTGCCTTCTACCACCCGGGTG
TCAATGGGCCCCCCCTGCCCTAG

Translation (940 aa):
MGSGPIDPKELLKGLDSFLNRDGEVKSVDGISKIFSLMKEARKMVSRCTYLNILLQTRSPEILVKFIDVG
GYKLLNNWLTYSKTTNNIPLLQQILLTLQHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDW
MAVIRSQSSTQPAEKDKKKRKDEGKSRTTLPERPLTEVKAETRAEEAPEKKREKPKSLRTTAPSHAKFRS
TGLELETPSLVPVKKNASTVVVSDKYNLKPIPLKRQSNVAAPGDATPPAEKKYKPLNTTPNATKEIKVKI
IPPQPMEGLGFLDALNSAPVPGIKIKKKKKVLSPTAAKPSPFEGKTSTEPSTAKPSSPEPAPPSEAMDAD
RPGTPVPPVEVPELMDTASLEPGALDAKPVESPGDPNQLTRKGRKRKSVTWPEEGKLREYFYFELDETER
VNVNKIKDFGEAAKREILSDRHAFETARRLSHDNMEEKVPWVCPRPLVLPSPLVTPGSNSQERYIQAERE
KGILQELFLNKESPHEPDPEPYEPIPPKLIPLDEECSMDETPYVETLEPGGSGGSPDGAGGSKLPPVLAN
LMGSMGAGKGPQGPGGGGINVQEILTSIMGSPNSHPSEELLKQPDYSDKIKQMLVPHGLLGPGPIANGFP
PGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGP
GPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPH
EGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG
GSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDGGHSHGGDMSNRP
VCRHFMMKGNCRYENNCAFYHPGVNGPPLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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