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Report for CCDS46801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46801.1 Public Homo sapiens 3 ZNF619 24 110 108 CCDS HistoryNCBI Gene:285267Re-query CCDS DB by CCDS ID:46801.1Re-query CCDS DB by GeneID:285267See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 46801.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000456778.5 ENSP00000397232.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456778.5Link to Ensembl Protein Viewer:ENSP00000397232.1Re-query CCDS DB by Nucleotide ID:ENST00000456778Re-query CCDS DB by Protein ID:ENSP00000397232
Original member Current member NCBI NM_001145083.3 NP_001138555.1 Accepted alive Link to Nucleotide Sequence:NM_001145083.3Link to Protein Sequence:NP_001138555.1Re-query CCDS DB by Nucleotide ID:NM_001145083Re-query CCDS DB by Protein ID:NP_001138555Link to BLAST:NP_001138555.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138555.1 532 Q8N2I2-2 532 100% 0 0

Chromosomal Locations for CCDS 46801.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 40477958 40478003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40482588 40482704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40486806 40488241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGAAGCCAGGGGTCATCAGCCATGCTCCAGACAGTGTGGTTCCAGCAGCATTTCCATTCCCCAAACCAG
ATCTGATATTCCAGCTGGAGCAAGGAGAAGCAGCATGGGGCCCAGATCCCTGGACACTTGCTGGGGGAGA
GGCCCTGAGAGGCATGTGCACAGGTGGTAAAACCAAGACTGAGAATGAGGAAAAAACTGCACAGCTAAAC
ATTTCTAAAGAATCAGAGTCCCACAGACTGATAGTGGAGGGACTGCTGATGGACGTTCCCCAGCACCCTG
ACTTCAAGGACAGGTTAGAGAAGTCACAGCTACATGATACAGGGAATAAAACAAAGATAGGGGATTGCAC
AGATTTGACAGTCCAGGATCATGAATCTTCCACCACTGAAAGGGAGGAGATAGCCAGGAAATTGGAAGAA
AGTAGTGTCAGCACACATCTCATTACAAAGCAGGGTTTTGCCAAAGAACAGGTGTTTTATAAATGTGGTG
AGTGTGGCAGTTACTACAACCCACATTCAGACTTTCACCTGCATCAGAGAGTTCACACTAATGAGAAGCC
CTACACATGCAAAGAATGTGGGAAAACCTTCAGATATAACTCAAAACTGTCACGGCATCAGAAAATCCAC
ACTGGAGAGAAACCATACTCATGTGAGGAATGTGGACAAGCCTTCAGTCAAAATTCCCACCTTCTTCAGC
ATCAGAAGCTCCATGGTGGACAGAGGCCCTATGAATGTACTGACTGTGGTAAAACCTTCAGTTATAATTC
AAAACTGATTCGGCATCAGAGAATCCATACTGGGGAGAAGCCCTTTAAATGTAAGGAATGTGGGAAAGCC
TTCAGTTGTAGCTATGACTGCATCATCCATGAACGAATTCACAATGGGGAGAAGCCCTATGAATGTAAGG
AGTGTGGGAAGAGTTTGAGTTCTAATTCAGTTCTGATTCAGCATCAGAGAATCCACACTGGGGAGAAACC
TTATGAATGTAAAGAGTGTGGCAAGGCCTTCCACCGCAGTTCGGTATTTCTTCAGCACCAGAGGTTCCAC
ACTGGGGAACAACTCTACAAATGTAATGAATGTTGGAAAACTTTCAGCTGTAGCTCCCGCTTCATAGTGC
ATCAGAGAATCCACAATGGGGAGAAACCCTATGAATGCCAGGAATGTGGGAAGACATTCAGTCAAAAGAT
CACTCTGGTTCAGCATCAGCGAGTTCACACTGGGGAGAAACCTTATGAGTGTAAGGAGTGCGGGAAAGCC
TTCAGATGGAATGCAAGTTTCATCCAGCATCAGAAGTGGCATACTAGGAAGAAACTCATCAATGGAACAG
GGCTATCCGCAGTTAAGCCCTACTGTCCCTGCGCCATCCTCTCTCCTCTGCCTCCCCAACATACCTGCTC
TGCCCTAGCCCCACCAGGGCCTCCCTTATCTTCTTCACATGCAGTGGTACTTCCTCCCTCTGTGCCTTTC
TTCCTGCTGCTTCCCTCATCTGAAAAGGCCAACCCTTCACCTGTCCAAATAGCACATTTTTTTCAGGATC
TCGCTTTTCCTGGGAAGTCATCCCTTCAGAGCCCGAATCCTTTGTCTCACTCCCTGTAA

Translation (532 aa):
MKPGVISHAPDSVVPAAFPFPKPDLIFQLEQGEAAWGPDPWTLAGGEALRGMCTGGKTKTENEEKTAQLN
ISKESESHRLIVEGLLMDVPQHPDFKDRLEKSQLHDTGNKTKIGDCTDLTVQDHESSTTEREEIARKLEE
SSVSTHLITKQGFAKEQVFYKCGECGSYYNPHSDFHLHQRVHTNEKPYTCKECGKTFRYNSKLSRHQKIH
TGEKPYSCEECGQAFSQNSHLLQHQKLHGGQRPYECTDCGKTFSYNSKLIRHQRIHTGEKPFKCKECGKA
FSCSYDCIIHERIHNGEKPYECKECGKSLSSNSVLIQHQRIHTGEKPYECKECGKAFHRSSVFLQHQRFH
TGEQLYKCNECWKTFSCSSRFIVHQRIHNGEKPYECQECGKTFSQKITLVQHQRVHTGEKPYECKECGKA
FRWNASFIQHQKWHTRKKLINGTGLSAVKPYCPCAILSPLPPQHTCSALAPPGPPLSSSHAVVLPPSVPF
FLLLPSSEKANPSPVQIAHFFQDLAFPGKSSLQSPNPLSHSL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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