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Report for CCDS46795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46795.1 Public Homo sapiens 3 EXOG 24 110 108 CCDS HistoryNCBI Gene:9941Re-query CCDS DB by CCDS ID:46795.1Re-query CCDS DB by GeneID:9941See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46795.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000422077.6 ENSP00000404305.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000422077.6Link to Ensembl Protein Viewer:ENSP00000404305.2Re-query CCDS DB by Nucleotide ID:ENST00000422077Re-query CCDS DB by Protein ID:ENSP00000404305
Original member Current member NCBI NM_001145464.2 NP_001138936.1 Accepted alive Link to Nucleotide Sequence:NM_001145464.2Link to Protein Sequence:NP_001138936.1Re-query CCDS DB by Nucleotide ID:NM_001145464Re-query CCDS DB by Protein ID:NP_001138936Link to BLAST:NP_001138936.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138936.1 318 Q9Y2C4-4 318 100% 0 0

Chromosomal Locations for CCDS 46795.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 38496368 38496530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38501355 38501494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38503615 38503691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38506854 38506968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 38523901 38524362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTTTTCTGAGCGGCTTCGTGGCTGGGG
CTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGGAGTCAGGGCGCTGAGGGAGC
GTTGACAGGGAAGCAGCCGGATGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCTGATCCCAATATC
CCTCCAACCTTCAGTGCCTTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACATGGCTCCAG
CAGGAAATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGA
TTTTGATAATAATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAA
GATGTTTGGGTGGTATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTT
ACCAGGTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAG
CTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCCAATGAAGCCATCGGCTTCCAGCCC
CAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGGACTGGTGTTTTTTCCTCATT
TGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCCTGGATTTCCAGGAGTT
CACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAAAAGATCATGGAA
AACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCTAGAAGAAC
TCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAG

Translation (318 aa):
MAIKSIASRLRGSRRFLSGFVAGAVVGAAGAGLAALQFFRSQGAEGALTGKQPDGDADRKHCKFKPDPNI
PPTFSAFNEDYVGSGWSRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFE
DVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNEAIGFQP
QLTEFQVSLQDLEKLSGLVFFPHLDRTSDIRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIME
NLKNAEIEPDDYFMSRYEKKLEELKAKEQSGTQIRKPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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