NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46786.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46786.1 Public Homo sapiens 3 TMPPE 24 110 108 CCDS HistoryNCBI Gene:643853Re-query CCDS DB by CCDS ID:46786.1Re-query CCDS DB by GeneID:643853See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46786.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000416695.6 ENSP00000400715.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000416695.6Link to Ensembl Protein Viewer:ENSP00000400715.2Re-query CCDS DB by Nucleotide ID:ENST00000416695Re-query CCDS DB by Protein ID:ENSP00000400715
Original member Current member NCBI NM_001136238.2 NP_001129710.1 Accepted alive Link to Nucleotide Sequence:NM_001136238.2Link to Protein Sequence:NP_001129710.1Re-query CCDS DB by Nucleotide ID:NM_001136238Re-query CCDS DB by Protein ID:NP_001129710Link to BLAST:NP_001129710.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129710.1 316 Q6ZT21-2 316 100% 0 0

Chromosomal Locations for CCDS 46786.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 33092834 33093784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAGCAGGCCTACCAGCTCTTGGCCTGGCGCAGTGGTAGGGTCGTGGGCAGCCTTGAGAAGACAAGGA
AGCTCGTGCTCAGGCCTGCCCTGGCAGTGGGAGTGACTGCTGTGCTCAGCGTGGCCGGGATTCTGAATGC
CGCGCAGCCCCCGGCTGTGAAAACTGTGGAGGTGCCCATCCATCAGCTGCCTGCCTCAATGAACAACCTC
AAGATCGTGCTCCTCTCAGACATTCACTTGGGCCCCACAGTGGGCAGGACCAAGATGGAAATGTTTGTGA
GGATGGTGAATGTGCTGGAACCAGACATCACGGTGATTGTGGGTGACCTCTCCGACTCAGAAGCCTCGGT
CCTGCGGACGGCTGTCGCTCCTCTGGGCCAGCTTCATTCACATCTCGGTGCCTACTTCGTCACAGGCAAT
CATGAGTACTACACGTCAGATGTCAGCAACTGGTTTGCACTTCTGGAATCCCTGCATGTCCAGCCTCTTC
ATAATGAGAACGTGAAGATTTCCGCCACACGGGCCCAACGTGGTGGTGGTGGCAGTGGCAGTGGGAGTGA
GGATGAGGACTGGATCTGCTTGGCTGGGGTGGACGATATTGAAGCAGACATCCTGCACTACTCTGGCCAT
GGCATGGATCTTGACAAGGCCCTGGAGGGCTGCAGCCCAGACCACACAATCATCTTGCTAGCTCACCAGC
CCCTGGCTGCCAAGAGAGCTCTCCAGGCTCGGCCAGATATTAACCTGATCCTTTCTGGGCACACACATGC
TGGGCAGATCTTCCCCTTGAACGTAGCAGCCTATCTCCTGAATCCCTTCTTTGCTGGTCTCTACCAGGTG
GCCCAGGCTACATTCGTGTATGTCAGCCCAGGCACAGCCTACTACGGGATACCCATGAGGCTGGGTAGCA
GGGCCGAGATCACAGAGCTCATCCTGCAGCGGTCTCCCTGA

Translation (316 aa):
MEQAYQLLAWRSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGILNAAQPPAVKTVEVPIHQLPASMNNL
KIVLLSDIHLGPTVGRTKMEMFVRMVNVLEPDITVIVGDLSDSEASVLRTAVAPLGQLHSHLGAYFVTGN
HEYYTSDVSNWFALLESLHVQPLHNENVKISATRAQRGGGGSGSGSEDEDWICLAGVDDIEADILHYSGH
GMDLDKALEGCSPDHTIILLAHQPLAAKRALQARPDINLILSGHTHAGQIFPLNVAAYLLNPFFAGLYQV
AQATFVYVSPGTAYYGIPMRLGSRAEITELILQRSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH