NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46720.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46720.1 Public Homo sapiens 22 CENPM 24 110 108 CCDS HistoryNCBI Gene:79019Re-query CCDS DB by CCDS ID:46720.1Re-query CCDS DB by GeneID:79019See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46720.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407253.7 ENSP00000384743.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407253.7Link to Ensembl Protein Viewer:ENSP00000384743.3Re-query CCDS DB by Nucleotide ID:ENST00000407253Re-query CCDS DB by Protein ID:ENSP00000384743
Original member Current member NCBI NM_001002876.3 NP_001002876.1 Accepted alive Link to Nucleotide Sequence:NM_001002876.3Link to Protein Sequence:NP_001002876.1Re-query CCDS DB by Nucleotide ID:NM_001002876Re-query CCDS DB by Protein ID:NP_001002876Link to BLAST:NP_001002876.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002876.1 107 Q9NSP4-4 107 100% 0 0

Chromosomal Locations for CCDS 46720.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 41939183 41939196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41945225 41945304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41945913 41946005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41946417 41946496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41947020 41947076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (324 nt):
ATGTCGGTGTTGAGGCCCCTGGACAAGCTGCCCGGCCTGAACACGGCCACCATCTTGCTGGTGGGCACGG
AGGATGCTCTTCTGCAGCAGCTGGCGGACTCGATGCTCAAAGAGGACTGCGCCTCCGAGCTGAAGGTCCA
CTTGGCAAAGTCCCTCCCTTTGCCCTCCAGTGTGAATCGGCCCCGAATTGACCTGATCGTGTTTGTGGTT
AATCTTCACAGCAAATACAGTCTCCAGAACACAGAGGAGTCCCTGCGCCATGTGGATGCCAGCTTCTTCT
TGGGGAAGGTGTGTTTCCTCGCCACAGGTGGTGGAAGGCTTTAG

Translation (107 aa):
MSVLRPLDKLPGLNTATILLVGTEDALLQQLADSMLKEDCASELKVHLAKSLPLPSSVNRPRIDLIVFVV
NLHSKYSLQNTEESLRHVDASFFLGKVCFLATGGGRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH