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Report for CCDS46539.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46539.1 Public Homo sapiens 2 C2orf72 24 110 108 CCDS HistoryNCBI Gene:257407Re-query CCDS DB by CCDS ID:46539.1Re-query CCDS DB by GeneID:257407See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46539.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373640.5 ENSP00000362743.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373640.5Link to Ensembl Protein Viewer:ENSP00000362743.4Re-query CCDS DB by Nucleotide ID:ENST00000373640Re-query CCDS DB by Protein ID:ENSP00000362743
Original member Current member NCBI NM_001144994.2 NP_001138466.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001144994.2Link to Protein Sequence:NP_001138466.1Re-query CCDS DB by Nucleotide ID:NM_001144994Re-query CCDS DB by Protein ID:NP_001138466Link to BLAST:NP_001138466.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138466.1 295 A6NCS6 295 100% 0 0

Chromosomal Locations for CCDS 46539.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 231037566 231038199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231041296 231041409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231046882 231047021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGGAGCGCGAGCTGGAGGCGCTGGCGGCCCGGCTTGCGCGCCCTGCCGAGCCGCCCTTCCAGGCGTTGG
TGGAAGCGGCGGGGGGCCGCGGGCAGGTGCTGCTGGTGGGCGAGCTGTGGGAGCGCGAACAGAGCCGCGC
GCTGCTGCGGGACTTCGCACGGGCGGTGTTCCCGCCGGAGCCAGGCGCGGCCAAGCCGGGCGGCGCGGCG
GCAGAGGGCGCGGGGCCCGGGGCGGCGCGCGGGGCGCAGAGGGCGGCGAGGGCGGCTGGGGCGGCGGGGG
CGGCGGCGGCGGCGGCGCGCGCCATCCGCTCGCCGCTGGTCTTCGTGCTGTGCCGCGCGTCGTCGCTGGC
CGCCCGGGAGCCGCGGCGCCGCCTGCGGGAGATGCTGCGGGACGTGCGCGGCCGGCGGCGGGCCGGGGCG
GCGCTGGTCGGGGTGCTGGTGGCCGAGGCCGGGCCAGAGGACGCGGTGGCGCCGGGGCTGCGGCTGCTGG
AGGCGCTGTTGCGCGCCGTGTTCGGCCGCCAGGCGGGGGGGCCCGTGCAGGCGGCCGCCTACTGCCCCGG
CCTCCCGGCCTCCTGCCTGGCCGTCCAGGCGGCCGCCTGCAGGGCCCTGCAAGCCGCCGGAGCCGGGCAA
CCAGTGGAAGGAGCCTGGGAGAGGCCAGGCCTCCCCGGACTGCTAGCCTGCTTTTCCTGGGGTCCCTGGA
GCCGGAGGAAGAACCAGGATGTTGCTGCCTGCAGAAGCTCAGCTCAGGAAGACTTCCAGGAACCTGAGGA
GGAGCTGCCACTAACAGCCATATTTCCCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAGCCTGT
GATGGAGTCGTACACACTCCTGCTGAGCCCACCGGAGACTCAAGATGA

Translation (295 aa):
MERELEALAARLARPAEPPFQALVEAAGGRGQVLLVGELWEREQSRALLRDFARAVFPPEPGAAKPGGAA
AEGAGPGAARGAQRAARAAGAAGAAAAAARAIRSPLVFVLCRASSLAAREPRRRLREMLRDVRGRRRAGA
ALVGVLVAEAGPEDAVAPGLRLLEALLRAVFGRQAGGPVQAAAYCPGLPASCLAVQAAACRALQAAGAGQ
PVEGAWERPGLPGLLACFSWGPWSRRKNQDVAACRSSAQEDFQEPEEELPLTAIFPNGDCDDLGRGSKAC
DGVVHTPAEPTGDSR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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