NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46529.1 Public Homo sapiens 2 NYAP2 24 110 108 CCDS HistoryNCBI Gene:57624Re-query CCDS DB by CCDS ID:46529.1Re-query CCDS DB by GeneID:57624See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46529.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636099.1 ENSP00000490942.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636099.1Link to Ensembl Protein Viewer:ENSP00000490942.1Re-query CCDS DB by Nucleotide ID:ENST00000636099Re-query CCDS DB by Protein ID:ENSP00000490942
Original member Current member NCBI NM_020864.2 NP_065915.1 Accepted alive Link to Nucleotide Sequence:NM_020864.2Link to Protein Sequence:NP_065915.1Re-query CCDS DB by Nucleotide ID:NM_020864Re-query CCDS DB by Protein ID:NP_065915Link to BLAST:NP_065915.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065915.1 653 Q9P242-1 653 100% 0 0

Chromosomal Locations for CCDS 46529.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 225408881 225409101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225513371 225513672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225581941 225583035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225626917 225627126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225651432 225651565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1962 nt):
ATGATATCCTCCAAGATGATGAGTTCTAATCCTGAGGAAGACCCTTTGGACACATTTCTCCAGTACATTG
AGGATATGGGGATGAAGGCCTATGATGGCTTGGTTATTCAGAATGCGTCAGATATTGCTCGAGAGAATGA
TCGCTTGAGAAATGAAACTAACCTAGCCTATTTGAAAGAGAAGAATGAAAAACGCCGAAGACAAGAAGAA
GCAATAAAGCGCATAGGTGGAGAAGTAGGGCGAGGCCACGAAGGAAGTTACGTGGGCAAACATTTCCGCA
TGGGATTCATGACAATGCCTGCTCCTCAGGACAGACTTCCCCATCCTTGCTCCAGTGGCTTTTCTGTGAG
ATCACAGTCCCTGCACTCGGTTGGGGGCACAGACGATGACAGCAGCTGTGGCTCACGGAGACAACCACCA
CCCAAACCCAAGAGGGACCCCAGCACCAAGCTGAGCACCTCATCAGAGACAGTCAGCAGCACTGCAGCCA
GTAAGAGCGGGAAAACCCCTGAGAGGACTGAAGCGTCAGCTAAACCAAGACCCCACAGCGATGAATATTC
CAAGAAGATTCCTCCTCCCAAACCGAAGCGAAATCCGAACACTCAGCTGAGCACATCTTTCGATGAAACG
TACATCAAAAAGCATGGGCCCCGGAGGACGTCGCTGCCGCGGGACTCCTCCTTGTCCCAGATGGGCAGCC
CCGCGGGAGACCCCGAGGAAGAGGAGCCCGTGTACATCGAGATGGTGGGGAACATTCTCAGAGACTTCAG
GAAGGAGGACGATGACCAGAGCGAGGCCGTCTACGAGGAAATGAAGTACCCTATCTTTGACGACTTGGGC
CAAGACGCCAAATGTGACTTCGACCATCACAGCTGTTCTTCGCAGTGTGCTACTCCCACGGTGCCTGACT
TGGACTTCGCCAAGGCCTCAGTGCCATGCCCCCCCAAGGGGCTGCTTTGCGACATCCCTCCGCCCTTCCC
CAACCTGCTTTCTCACAGACCCCCGCTGCTGGTATTTCCCCCCGCCCCCGTGCATTGCTCCCCCAACTCC
GACGAGTCCCCGCTTACCCCTCTGGAGGTCACGAAGCTTCCCGTGCTGGAAAACGTGTCTTACATGAAAC
AGCCAGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAAAGAGCA
GGCCGCGGCCCTGGGACCTGCCTCTGCCACCCCTGCGCTCTCCTCGTCGCCCCCACCCCCGTCTACGCTG
TACCGAACCCAGTCTCCCCATGGCTACCCTAAAAGTCACTCCACCTCTCCCTCCCCCGTCAGCATGGGGA
GGTCCCTGACTCCCCTGAGCCTCAAAAGGCCTCCCCCTTACGACGCTGTGCATTCGGGCAGCCTCTCAAG
GAGCTCTCCTTCAGTGCCTCACTCGACCCCCAGACCCGTGTCGCAAGATGGGGCCAAGATGGTCAACGCC
GCGGTGAACACCTACGGGGCAGCCCCGGGTGGCTCCCGGTCCCGGACACCCACGAGCCCGCTGGAGGAGC
TGACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCC
TGCAGAGAAATCAACAGAGGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAAC
AAGGAAAGAGGCCACCATGGGGCGTCTTCCTCCAGAGAGCCTGTCAAAGCTCAGGAATGGGATGGAACAC
CAGGGACACCTGTGGTCACCAGTCGACTAGGAAGATGCTCTGTGAGCCCCACCTTGTTAGCGGGAAACCA
CAGTTCAGAGCCTAAAGTAAGCTGCAAATTAGGCCGGTCTGCGTCGACGTCAGGTGTGCCTCCTCCATCA
GTCACTCCCCTCAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTACCATCATCGTTAGCCAATCGTGATT
GA

Translation (653 aa):
MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEE
AIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPP
PKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDET
YIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLG
QDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNS
DESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL
YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNA
AVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDN
KERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPS
VTPLRQSSDLQQSQVPSSLANRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH