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Report for CCDS46301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46301.1 Public Homo sapiens 2 WDPCP 24 110 108 CCDS HistoryNCBI Gene:51057Re-query CCDS DB by CCDS ID:46301.1Re-query CCDS DB by GeneID:51057See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 46301.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398544.7 ENSP00000381552.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398544.7Link to Ensembl Protein Viewer:ENSP00000381552.3Re-query CCDS DB by Nucleotide ID:ENST00000398544Re-query CCDS DB by Protein ID:ENSP00000381552
Original member Current member NCBI NM_001042692.3 NP_001036157.1 Accepted alive Link to Nucleotide Sequence:NM_001042692.3Link to Protein Sequence:NP_001036157.1Re-query CCDS DB by Nucleotide ID:NM_001042692Re-query CCDS DB by Protein ID:NP_001036157Link to BLAST:NP_001036157.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036157.1 587 O95876-3 587 100% 0 0

Chromosomal Locations for CCDS 46301.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 63122006 63122056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63152914 63152945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63153495 63153574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63174670 63174832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63259307 63259409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63313248 63313311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63378386 63378509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63381906 63382094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63404048 63404657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63433745 63433936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63437421 63437554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 63437862 63437883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1764 nt):
ATGTTTTCGTCTCTACATTCAGCTCTTCTCACAGACAGTTTTATCATCTTATCATTTTTGGCACAAAACA
AACTATGTTTTATTCAGTTTACCAAGAAGATGGAGTCTTCTGATGTAAACAAAAGACTGGAAAAACTCTC
AGCCTTGGATTATAAGATTTTCTATTATGAAATACCCGGCCCAATAAACAAGACAACAGAGCGACATCTA
GCTATCAACTGTGTTCATGATAGAGTTGTTTGCTGGTGGCCACTGGTCAACGATGATGCTTGGCCTTGGG
CCCCCATTTCTTCTGAGAAGGACAGAGCCAATCTACTCCTCCTGGGTTATGCTCAAGGAAGACTAGAGGT
TCTGAGTTCTGTCCGCACAGAATGGGACCCACTGGATGTTCGCTTTGGCACCAAACAGCCTTATCAGGTG
TTCACAGTGGAGCACTCCGTAAGTGTAGACAAAGAGCCCATGGCTGACAGCTGCATCTATGAATGCATTC
GGAATAAAATCCAGTGTGTGTCAGTCACCAGAATACCACTAAAGTCAAAGGCCATCAGCTGCTGCAGGAA
TGTTACTGAAGACAAACTGATTCTGGGCTGTGAAGATTCTTCGCTAATTCTTTATGAAACTCACCGTAGA
GTGACTCTCTTAGCACAGACTGAACTTTTGCCTTCATTAATAAGCTGCCACCCAAGTGGTGCCATTCTGC
TAGTTGGCAGCAACCAAGGGGAGTTGCAAATTTTTGATATGGCTCTATCCCCTATTAACATCCAACTGTT
GGCTGAAGACCGCTTACCCAGGGAGACTCTGCAATTCAGTAAATTATTTGATGCCTCCAGCAGTCTTGTT
CAAATGCAATGGATAGCTCCTCAGGTTGTTTCTCAGAAGGGTGAAGGTAGTGATATCTATGATCTCCTCT
TCCTCAGGTTTGAAAGAGGACCTTTGGGTGTGCTGTTGTTTAAACTAGGCGTCTTCACTCGAGGACAGCT
GGGCCTGATAGACATCATCTTCCAGTACATTCACTGTGATGAGATCTATGAGGCAATAAACATCCTGAGC
AGCATGAACTGGGACACTCTGGGCCACCAGTGCTTTATCAGCATGAGCGCCATTGTAAACCATCTTCTTA
GACAGAAGCTCACTCCAGAGAGAGAAGCACAGCTTGAGACAAGCCTTGGAACCTTCTATGCTCCAACAAG
ACCACTTCTGGATTCCACTATATTGGAATATAGAGATCAAATCAGCAAATATGCAAGGAGATTCTTCCAT
CACTTGCTCAGGTACCAGAGGTTTGAAAAGGCATTTCTCCTAGCTGTTGACGTTGGTGCTCGTGACCTCT
TTATGGATATTCATTACCTTGCACTAGATAAAGGTGAATTGGCACTAGCTGAAGTGGCAAGAAAAAGAGC
TAGTGACATTGATGCAGAATCAATAACCTCTGGGGTTGAACTCCTGGGACCCTTGGACAGAGGGGATATG
CTAAATGAAGCATTTATTGGCCTGTCTTTAGCACCTCAAGGAGAAGACTCATTTCCAGATAACCTCCCTC
CCTCTTGCCCAACCCACAGACATATTTTACAACAAAGAATACTGAATGGCTCTTCTAACAGACAAATAAT
TGACAGAAGGAATGAACTTGAAAAAGACATCTGTTCTGGATTTTTGATGACTAATACCTGTAATGCAGAA
GACGGAGAACTGAGAGAAGACGGCAGAGAACAGGAAATCAGAGATGGTGGTTCTCTCAAAATGATTCACT
TTGGTCTGGTGTAA

Translation (587 aa):
MFSSLHSALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPGPINKTTERHL
AINCVHDRVVCWWPLVNDDAWPWAPISSEKDRANLLLLGYAQGRLEVLSSVRTEWDPLDVRFGTKQPYQV
FTVEHSVSVDKEPMADSCIYECIRNKIQCVSVTRIPLKSKAISCCRNVTEDKLILGCEDSSLILYETHRR
VTLLAQTELLPSLISCHPSGAILLVGSNQGELQIFDMALSPINIQLLAEDRLPRETLQFSKLFDASSSLV
QMQWIAPQVVSQKGEGSDIYDLLFLRFERGPLGVLLFKLGVFTRGQLGLIDIIFQYIHCDEIYEAINILS
SMNWDTLGHQCFISMSAIVNHLLRQKLTPEREAQLETSLGTFYAPTRPLLDSTILEYRDQISKYARRFFH
HLLRYQRFEKAFLLAVDVGARDLFMDIHYLALDKGELALAEVARKRASDIDAESITSGVELLGPLDRGDM
LNEAFIGLSLAPQGEDSFPDNLPPSCPTHRHILQQRILNGSSNRQIIDRRNELEKDICSGFLMTNTCNAE
DGELREDGREQEIRDGGSLKMIHFGLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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