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Report for CCDS4623.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4623.1 Public Homo sapiens 6 PRSS16 24 110 108 CCDS HistoryNCBI Gene:10279Re-query CCDS DB by CCDS ID:4623.1Re-query CCDS DB by GeneID:10279See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4623.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000230582.8 ENSP00000230582.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000230582.8Link to Ensembl Protein Viewer:ENSP00000230582.3Re-query CCDS DB by Nucleotide ID:ENST00000230582Re-query CCDS DB by Protein ID:ENSP00000230582
Original member Current member NCBI NM_005865.4 NP_005856.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005865.4Link to Protein Sequence:NP_005856.1Re-query CCDS DB by Nucleotide ID:NM_005865Re-query CCDS DB by Protein ID:NP_005856Link to BLAST:NP_005856.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005856.1 514 Q9NQE7 514 100% 0 0

Chromosomal Locations for CCDS 4623.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 27247738 27247807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27247882 27248048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27248847 27248946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27249100 27249229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27250683 27250806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27251042 27251119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27251217 27251264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27251750 27252040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27252808 27252949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27254693 27254872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27254986 27255131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 27255247 27255315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGCCGTCTGGCTTGCCCAGTGGCTGGGCCCTCTGCTCTTGGTTTCCCTCTGGGGACTCTTGGCTCCAG
CCTCCCTTCTTAGGCGCCTGGGTGAGCACATTCAGCAGTTTCAGGAGAGCTCTGCCCAGGGCCTGGGCCT
GAGCCTGGGGCCAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTTCAAC
GTGTCCGACAGACGATCCTTCCTACAGCGTTACTGGGTGAATGACCAACATTGGGTTGGCCAGGATGGAC
CCATATTCCTGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCTCAGTGATGAGAGGCCATCCCGCAGC
CTTGGCCCCAGCCTGGGGCGCCCTGGTGATAAGCCTGGAACACAGATTTTATGGCCTGAGTATACCTGCT
GGAGGCCTGGAAATGGCCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCGCTGGCTGATGTGGTCTCTGCCC
GCCTGGCACTTTCCCGCCTCTTTAACATCTCCTCCTCCAGCCCCTGGATCTGCTTCGGAGGCTCCTATGC
CGGCTCCTTGGCCGCCTGGGCCCGGCTGAAGTTCCCCCATCTCATTTTCGCGTCGGTCGCCTCCTCCGCC
CCGGTGCGGGCCGTGCTGGATTTCTCCGAGTATAATGACGTGGTATCCCGAAGCCTAATGAGCACCGCGA
TCGGCGGGTCCCTGGAGTGCCGGGCGGCGGTGTCCGTCGCCTTCGCTGAAGTGGAGCGGCGGCTGCGCTC
GGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCCCCTGGGCCGCGCTGAAAAC
CAGGCGGAGCTGTTGGGGGCGCTGCAGGCACTGGTGGGAGGTGTAGTGCAGTATGATGGGCAGACGGGAG
CGCCGCTAAGCGTGCGACAGCTCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCC
CTACTGCGGGCTTCGTCGGGCGGTGCAGATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCC
CGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGT
TGTATCAGACATGTACCGAGTTCGGCTTCTATGTCACCTGTGAGAATCCCAGATGTCCTTTCTCCCAGCT
CCCAGCACTGCCCTCCCAGCTAGACCTATGTGAGCAGGTGTTTGGGCTCTCAGCCTTGTCAGTAGCCCAG
GCTGTGGCTCAGACGAACTCCTACTACGGTGGCCAGACCCCTGGGGCTAACAAAGTGCTGTTTGTTAATG
GGGACACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTAT
CCGCACTGGCTCCCACTGCTTGGACATGGCACCTGAGAGGCCCTCAGACTCCCCCAGCCTCCGCCTAGGG
CGCCAGAACATCTTCCAGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGATTAAGGGTGAAG
TCTGA

Translation (514 aa):
MAVWLAQWLGPLLLVSLWGLLAPASLLRRLGEHIQQFQESSAQGLGLSLGPGAAALPKVGWLEQLLDPFN
VSDRRSFLQRYWVNDQHWVGQDGPIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPA
GGLEMAQLRFLSSRLALADVVSARLALSRLFNISSSSPWICFGGSYAGSLAAWARLKFPHLIFASVASSA
PVRAVLDFSEYNDVVSRSLMSTAIGGSLECRAAVSVAFAEVERRLRSGGAAQAALRTELSACGPLGRAEN
QAELLGALQALVGGVVQYDGQTGAPLSVRQLCGLLLGGGGNRSHSTPYCGLRRAVQIVLHSLGQKCLSFS
RAETVAQLRSTEPQLSGVGDRQWLYQTCTEFGFYVTCENPRCPFSQLPALPSQLDLCEQVFGLSALSVAQ
AVAQTNSYYGGQTPGANKVLFVNGDTDPWHVLSVTQALGSSESTLLIRTGSHCLDMAPERPSDSPSLRLG
RQNIFQQLQTWLKLAKESQIKGEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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