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Report for CCDS46121.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46121.1 Public Homo sapiens 19 IGFL2 24 110 108 CCDS HistoryNCBI Gene:147920Re-query CCDS DB by CCDS ID:46121.1Re-query CCDS DB by GeneID:147920See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46121.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377693.5 ENSP00000366922.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377693.5Link to Ensembl Protein Viewer:ENSP00000366922.3Re-query CCDS DB by Nucleotide ID:ENST00000377693Re-query CCDS DB by Protein ID:ENSP00000366922
Original member Current member NCBI NM_001135113.2 NP_001128585.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135113.2Link to Protein Sequence:NP_001128585.1Re-query CCDS DB by Nucleotide ID:NM_001135113Re-query CCDS DB by Protein ID:NP_001128585Link to BLAST:NP_001128585.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128585.1 119 Q6UWQ7-1 119 100% 0 0

Chromosomal Locations for CCDS 46121.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46148279 46148297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46160415 46160468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46160614 46160881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46161070 46161088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (360 nt):
ATGGTGCCCAGAATCTTCGCTCCTGCTTATGTGTCAGTCTGTCTCCTCCTCTTGTGTCCAAGGGAAGTCA
TCGCTCCCGCTGGCTCAGAACCATGGCTGTGCCAGCCGGCACCCAGGTGTGGAGACAAGATCTACAACCC
CTTGGAGCAGTGCTGTTACAATGACGCCATCGTGTCCCTGAGCGAGACCCGCCAATGTGGTCCCCCCTGC
ACCTTCTGGCCCTGCTTTGAGCTCTGCTGTCTTGATTCCTTTGGCCTCACAAACGATTTTGTTGTGAAGC
TGAAGGTTCAGGGTGTGAATTCCCAGTGCCACTCATCTCCCATCTCCAGTAAATGTGAAAGCAGAAGACG
TTTTCCCTGA

Translation (119 aa):
MVPRIFAPAYVSVCLLLLCPREVIAPAGSEPWLCQPAPRCGDKIYNPLEQCCYNDAIVSLSETRQCGPPC
TFWPCFELCCLDSFGLTNDFVVKLKVQGVNSQCHSSPISSKCESRRRFP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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