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Report for CCDS46029.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46029.1 Public Homo sapiens 19 ZNF486 24 110 108 CCDS HistoryNCBI Gene:90649Re-query CCDS DB by CCDS ID:46029.1Re-query CCDS DB by GeneID:90649See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46029.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335117.9 ENSP00000335042.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335117.9Link to Ensembl Protein Viewer:ENSP00000335042.7Re-query CCDS DB by Nucleotide ID:ENST00000335117Re-query CCDS DB by Protein ID:ENSP00000335042
Original member Current member NCBI NM_052852.4 NP_443084.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052852.4Link to Protein Sequence:NP_443084.2Re-query CCDS DB by Nucleotide ID:NM_052852Re-query CCDS DB by Protein ID:NP_443084Link to BLAST:NP_443084.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443084.2 463 Q96H40 463 100% 0 0

Chromosomal Locations for CCDS 46029.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 20167331 20167360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20184356 20184482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20185987 20186082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 20196964 20198102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGCCGGGACCCCTTAGAAGCCTAGAAATGGAATCATTGCAATTTAGAGATGTGGCTGTAGAATTCTCTC
TGGAGGAGTGGCATTGCCTGGACACTGCACAGCAGAATTTATATAGGGATGTGATGTTAGAGAACTACAG
ACACCTGGTCTTCCTTGGTATTATTGTCTCTAAGCCAGACCTGATCACCTGTCTGGAGCAAGGAATAAAA
CCTCTGACTATGAAGAGACATGAGATGATTGCCAAACCCCCAGTTGTGTGTTCTCATTTTGCCCAAGACC
TTTGGCCAGAGCAGAGCATAAAAGATTCTTACCAAAAAGTGATACTGAGAAAATTTGAAAAATGTGGACA
TGGCAATTTACACTTTAAAAAAGGCTGTGAAAGTGTGGATGAGTGTAAGTTACACAAAAGAGGTTATAAT
GGACTTAACCAATGTTTGACAACTACCCAGAGCAAAATATTTCAATGTGGTAAATATGTGAAAGTCTTTC
ATCAATTTTCAAATTCAAAGAGACATAAAAGAAGACATACTGAAAAAAAACCTTTGAAATATATAGAAGG
TGACAAAGCTTTTAACCAGTCCTCAACCCATACTACACATAAAAAAATTGATACTGGAGAGAAACCATAC
AAATGTGAAGAATGTGGCAAAGCCTTCAACCGGTCCTCACACCTTACTACACATAAGATAACTCATACTA
GAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGTCTTTAAGTACTTCTCTAGCTTTACTACACATAA
GAAAATTCATAGTGGAGAGAAACCCTACATTTGTGAAGAATGTGGCAAAGCCTTTATGTACCCCTATACC
CTTACTACACATAAGATAATCCATACTGGAGAGCAACCCTACAAATGTAAAGAATGTGACAAAGCTTTTA
ACCATCCTGCAACTCTTTCTTCACATAAGAAAATTCATACTGGAGAGAAACCGTACACGTGTGATAAATG
TGGCAAAGCCTTTATTTCATCCTCGATCCTTAGTAAACATGAGAAGATTCATACGGGAGAGAAACCCTAC
AAATGTGAAGAATGTGGCAAAGCCTTCACCCGCTCCTCACACCTTACTATGCATAAGATAATTCATACTG
GAGAGAAACCATACAAATGTGAAGAATGTGGCAAAGCCTTTACATGGTCTGCAGGCCTCCATAAACATAG
GAGAACTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCGTATACTACATCCTCAAAT
CTAACTGAACATAAGACAACTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTGGCAAAGCTTTTA
ACTGGTCCTCAGACCTTAATAAACATAAGAGAATTCATATTGGACAGAAACCAAGAACGTGA

Translation (463 aa):
MPGPLRSLEMESLQFRDVAVEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIIVSKPDLITCLEQGIK
PLTMKRHEMIAKPPVVCSHFAQDLWPEQSIKDSYQKVILRKFEKCGHGNLHFKKGCESVDECKLHKRGYN
GLNQCLTTTQSKIFQCGKYVKVFHQFSNSKRHKRRHTEKKPLKYIEGDKAFNQSSTHTTHKKIDTGEKPY
KCEECGKAFNRSSHLTTHKITHTREKPYKCEECGKVFKYFSSFTTHKKIHSGEKPYICEECGKAFMYPYT
LTTHKIIHTGEQPYKCKECDKAFNHPATLSSHKKIHTGEKPYTCDKCGKAFISSSILSKHEKIHTGEKPY
KCEECGKAFTRSSHLTMHKIIHTGEKPYKCEECGKAFTWSAGLHKHRRTHTGEKPYKCEECGKAYTTSSN
LTEHKTTHTGEKPYKCKECGKAFNWSSDLNKHKRIHIGQKPRT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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