NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45986.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45986.1 Public Homo sapiens 19 ZNF20 24 110 108 CCDS HistoryNCBI Gene:7568Re-query CCDS DB by CCDS ID:45986.1Re-query CCDS DB by GeneID:7568See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45986.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334213.10 ENSP00000335437.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334213.10Link to Ensembl Protein Viewer:ENSP00000335437.5Re-query CCDS DB by Nucleotide ID:ENST00000334213Re-query CCDS DB by Protein ID:ENSP00000335437
Original member Current member NCBI NM_021143.4 NP_066966.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021143.4Link to Protein Sequence:NP_066966.2Re-query CCDS DB by Nucleotide ID:NM_021143Re-query CCDS DB by Protein ID:NP_066966Link to BLAST:NP_066966.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066966.2 532 P17024 532 100% 0 0

Chromosomal Locations for CCDS 45986.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12132587 12133985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12135500 12135560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12135769 12135904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12140180 12140182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGATGTTTCAGGATTCAGTGGCCTTTGAGGATGTGGCTGTCAGCTTCACCCAGGAGGAGTGGGCTTTGC
TGGATCCTTCCCAGAAGAATCTCTACAGGGATGTGATGCAGGAAACCTTCAAGAACCTGACCTCTGTAGG
AAAAACATGGAAAGTTCAGAACATTGAAGATGAGTACAAAAATCCCAGGAGAAATCTAAGTCTTATGAGA
GAGAAACTCTGTGAAAGTAAAGAAAGTCATCACTGTGGAGAAAGCTTCAACCAGATTGCAGATGACATGC
TGAACAGGAAAACTCTTCCTGGAATAACACCATGTGAAAGCAGTGTGTGTGGAGAAGTTGGCACGGGTCA
TTCATCTCTTAATACGCATATCAGAGCTGACACTGGACACAAGTCATCTGAGTATCAGGAATATGGAGAG
AATCCATATAGAAATAAGGAATGTAAGAAAGCCTTCAGTTATCTTGACTCCTTTCAATCACATGATAAAG
CTTGCACTAAAGAGAAACCCTATGATGGTAAAGAATGTACAGAAACCTTCATTTCCCATTCATGCATTCA
AAGACACAGGGTAATGCACAGTGGAGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCCTTCTATTTT
CTCAATTTATGTCTTATCCATGAACGAATTCACACTGGTGTGAAACCATATAAGTGTAAACAATGTGGTA
AGGCCTTTACTCGTTCCACTACCCTTCCAGTACATGAAAGAACTCACACAGGAGTGAATGCCGATGAATG
TAAAGAATGTGGGAATGCATTCAGTTTTCCTAGTGAAATTCGTAGACATAAAAGGTCTCACACTGGAGAA
AAACCCTATGAGTGTAAGCAATGTGGGAAAGTCTTCATTTCTTTCAGTTCCATTCAGTATCATAAGATGA
CTCACACTGGAGAGAAACCCTATGAATGTAAGCAGTGTGGGAAAGCCTTTAGATGTGGCTCACACCTTCA
AAAGCATGGAAGGACTCACACTGGAGAGAAACCCTATGAATGTAGGCAATGTGGTAAAGCCTTCAGATGT
ACCTCGGACCTTCAAAGGCATGAAAAGACACACACTGAGGATAAACCCTATGGATGTAAGCAGTGTGGGA
AAGGCTTTAGATGTGCTTCACAACTTCAAATTCATGAAAGGACGCACAGTGGAGAGAAACCCCATGAATG
TAAGGAATGTGGAAAAGTATTCAAGTATTTTTCTTCCTTGCGTATACATGAAAGGACGCACACTGGAGAG
AAGCCCCATGAATGTAAGCAATGTGGAAAAGCATTCAGGTATTTCTCTTCCTTGCATATACATGAAAGGA
CACACACTGGAGATAAGCCATATGAGTGTAAGGTATGTGGCAAAGCCTTCACTTGTTCCAGTTCCATTCG
ATATCATGAAAGGACTCACACTGGAGAGAAACCCTATGAATGTAAGCACTGTGGTAAGGCCTTTATTTCC
AATTACATTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATCAATGCAAGCAATGTGGCAAAG
CCTTTATTCGTGCCAGTTCATGTCGAGAACATGAAAGAACTCATACCATTAATAGATGA

Translation (532 aa):
MMFQDSVAFEDVAVSFTQEEWALLDPSQKNLYRDVMQETFKNLTSVGKTWKVQNIEDEYKNPRRNLSLMR
EKLCESKESHHCGESFNQIADDMLNRKTLPGITPCESSVCGEVGTGHSSLNTHIRADTGHKSSEYQEYGE
NPYRNKECKKAFSYLDSFQSHDKACTKEKPYDGKECTETFISHSCIQRHRVMHSGDGPYKCKFCGKAFYF
LNLCLIHERIHTGVKPYKCKQCGKAFTRSTTLPVHERTHTGVNADECKECGNAFSFPSEIRRHKRSHTGE
KPYECKQCGKVFISFSSIQYHKMTHTGEKPYECKQCGKAFRCGSHLQKHGRTHTGEKPYECRQCGKAFRC
TSDLQRHEKTHTEDKPYGCKQCGKGFRCASQLQIHERTHSGEKPHECKECGKVFKYFSSLRIHERTHTGE
KPHECKQCGKAFRYFSSLHIHERTHTGDKPYECKVCGKAFTCSSSIRYHERTHTGEKPYECKHCGKAFIS
NYIRYHERTHTGEKPYQCKQCGKAFIRASSCREHERTHTINR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH