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Report for CCDS45901.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45901.1 Public Homo sapiens 19 ATP8B3 24 110 108 CCDS HistoryNCBI Gene:148229Re-query CCDS DB by CCDS ID:45901.1Re-query CCDS DB by GeneID:148229See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45901.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310127.10 ENSP00000311336.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310127.10Link to Ensembl Protein Viewer:ENSP00000311336.6Re-query CCDS DB by Nucleotide ID:ENST00000310127Re-query CCDS DB by Protein ID:ENSP00000311336
Original member Current member NCBI NM_138813.4 NP_620168.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138813.4Link to Protein Sequence:NP_620168.1Re-query CCDS DB by Nucleotide ID:NM_138813Re-query CCDS DB by Protein ID:NP_620168Link to BLAST:NP_620168.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620168.1 1300 O60423-2 1300 100% 0 0

Chromosomal Locations for CCDS 45901.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1783028 1783270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1784819 1784946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1785159 1785297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1785469 1785708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1787103 1787186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1788897 1789120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1789361 1789727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1789890 1789989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1790757 1790832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1791750 1791861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1792001 1792135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1795875 1795987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1796077 1796265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1796711 1796879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1796974 1797005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1799947 1800155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1800259 1800449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1801956 1802044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1802487 1802645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1805374 1805456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1805888 1805958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1806097 1806169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1806628 1806689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1807168 1807266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1808222 1808335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1809643 1809734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1810622 1810683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1811489 1811736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3903 nt):
ATGGGCACTGGCCCCGCTCAGACTCCCAGGAGCACCAGAGCTGGCCCTGAGCCAAGCCCTGCCCCACCAG
GACCTGGGGACACGGGTGACTCAGACGTGACTCAGGAAGGCTCAGGTCCTGCTGGCATCCGCGGAGGTGA
GACGGTGATCAGAGCTGGGATGGGAGACTCCCCAGGCAGAGGGGCACCTGAGAGGAGGCACAAGGCCCAG
CCTGGCCGGGCTAGGAAGTATGAATGGAGACCAGAAGGCCCCACCAGCATGGGCAGCCTCGGCCAGAGAG
AAGATCTCCAAGATGAGGACAGGAACTCAGCATTCACCTGGAAGGTCCAGGCCAACAACCGTGCCTACAA
CGGGCAGTTCAAGGAGAAGGTGATCCTGTGCTGGCAAAGGAAGAAATACAAGACCAATGTCATCCGCACG
GCCAAGTACAACTTCTACTCGTTCCTGCCGCTGAACCTGTACGAGCAGTTCCACCGCGTGTCCAACCTGT
TCTTCCTCATCATCATCATCCTGCAGAGCATTCCCGACATCTCCACGCTGCCCTGGTTCTCGCTCAGTAC
CCCTATGGTCTGCCTCCTCTTCATCCGTGCCACCCGGGACCTGGTGGACGACATGGGGAGACACAAGAGT
GACAGAGCCATCAACAACAGACCCTGCCAGATTCTGATGGGGAAGAGCTTCAAGCAGAAGAAATGGCAGG
ATCTGTGCGTGGGGGATGTGGTCTGTCTCCGCAAGGACAACATCGTCCCAGCCGACATGCTCTTGCTGGC
CAGCACGGAGCCCAGCAGCCTGTGCTATGTGGAGACGGTGGACATTGACGGGGAGACCAACTTGAAGTTC
AGACAGGCCCTGATGGTCACCCACAAAGAACTGGCCACTATAAAGAAGATGGCGTCCTTTCAAGGCACAG
TGACGTGTGAGGCGCCTAACAGTCGGATGCACCACTTCGTGGGGTGCCTGGAATGGAATGACAAGAAATA
CTCCCTGGACATTGGCAACCTCCTCCTCCGAGGCTGCAGGATTCGCAACACAGACACCTGCTATGGACTG
GTCATTTATGCTGGTTTTGACACAAAAATTATGAAGAACTGTGGCAAGATCCATTTGAAGAGAACCAAGC
TGGACCTCCTGATGAACAAGCTGGTGGTTGTGATCTTCATCTCCGTGGTGCTTGTCTGCCTGGTGTTGGC
CTTCGGCTTCGGTTTCTCAGTCAAAGAATTCAAAGACCACCACTACTACCTCTCGGGGGTGCATGGGAGC
AGCGTGGCCGCAGAGTCCTTCTTCGTCTTCTGGAGCTTCCTCATCCTGCTCAGCGTCACCATCCCGATGT
CCATGTTCATCCTGTCCGAGTTCATCTACCTGGGGAACAGCGTCTTCATCGACTGGGACGTGCAGATGTA
CTACAAGCCGCAGGACGTGCCTGCCAAGGCCCGCAGCACCAGCCTCAACGACCACCTGGGCCAGGTGGAA
TACATCTTCTCGGACAAGACGGGCACGCTCACGCAGAACATCTTGACCTTCAACAAGTGCTGCATCAGCG
GCCGCGTCTATGGGCCGGATTCAGAGGCCACGACCCGACCTAAGGAGAACCCCTACCTCTGGAACAAGTT
CGCCGACGGGAAGCTGCTCTTCCACAATGCGGCCCTGCTGCACCTCGTGCGGACCAACGGGGACGAGGCC
GTGCGGGAGTTCTGGCGCCTGCTGGCCATCTGCCACACGGTGATGGTGCGGGAGAGCCCCCGTGAGCGCC
CAGACCAGCTGTTGTACCAGGCGGCCTCCCCCGACGAGGGGGCGCTGGTCACCGCAGCCCGGAACTTCGG
CTACGTGTTCCTGTCCCGCACCCAGGACACCGTCACGATCATGGAGCTGGGGGAGGAACGGGTCTACCAG
GTCCTGGCCATAATGGACTTCAACAGCACGCGCAAACGGATGTCGGTGCTGGTTCGAAAGCCAGAGGGCG
CCATCTGCCTGTACACCAAGGGCGCCGACACGGTCATCTTCGAACGCTTGCACAGGAGGGGGGCAATGGA
ATTTGCCACAGAGGAGGCCTTGGCTGCCTTTGCCCAGGAGACCCTGCGGACACTGTGCCTGGCCTACAGG
GAGGTGGCTGAGGACATTTACGAGGACTGGCAGCAGCGCCACCAGGAGGCCAGCCTCCTGCTGCAGAACC
GGGCACAGGCCCTGCAACAGCTGCTGGGAGCCACAGCCATCGAGGACAGACTCCAGGACGGTGTCCCTGA
AACCATCAAATGTCTCAAGAAGAGCAACATCAAAATATGGGTGCTCACCGGGGACAAGCAGGAAACGGCT
GTGAACATCGGCTTCGCCTGCGAGCTGCTGTCAGAGAATATGCTCATTCTGGAGGAGAAGGAGATTAGCC
GCATCCTGGAGACCTACTGGGAAAACAGTAACAACCTTCTAACCAGGGAGTCCCTGTCGCAGGTCAAGCT
GGCCTTGGTCATTAACGGAGACTTCCTGGACAAACTGCTGGTGTCCCTGCGGAAGGAGCCGCGCGCCCTG
GCGCAGAACGTGAACATGGACGAGGCGTGGCAGGAGCTCGGCCAGTCCAGGAGGGATTTCCTCTACGCCA
GGCGCCTGTCCCTGCTGTGCCGGAGGTTCGGGCTCCCGCTGGCTGCACCGCCAGCCCAGGACTCCAGAGC
CCGCCGTAGCTCCGAGGTGCTGCAGGAGCGCGCCTTCGTGGACCTGGCGTCCAAGTGCCAGGCGGTCATC
TGCTGCCGCGTGACGCCCAAGCAGAAGGCCCTGATCGTGGCCCTGGTCAAGAAGTACCACCAGGTGGTGA
CCCTGGCCATCGGGGACGGTGCCAACGACATCAACATGATCAAGACCGCGGACGTGGGCGTGGGGCTGGC
GGGCCAGGAGGGCATGCAGGCAGTTCAGAACAGCGACTTCGTGCTCGGCCAGTTCTGCTTCCTGCAGCGC
CTCCTGCTGGTGCACGGCCGCTGGTCCTACGTGCGGATCTGCAAGTTCCTGCGCTACTTCTTCTACAAGA
GCATGGCCAGCATGATGGTGCAGGTCTGGTTTGCCTGCTACAACGGCTTCACCGGCCAGCCCCTGTATGA
AGGATGGTTCCTGGCTCTTTTCAACCTCCTGTACAGCACCCTGCCAGTTCTCTACATTGGGCTCTTTGAG
CAGGACGTGAGCGCAGAGCAGAGCCTGGAGAAGCCGGAGCTGTACGTGGTGGGGCAGAAGGACGAGCTCT
TCAACTACTGGGTCTTCGTCCAAGCCATCGCCCATGGTGTGACCACCTCTCTGGTCAACTTCTTCATGAC
ACTGTGGATCAGCCGCGACACGGCGGGACCCGCCAGCTTCAGCGACCACCAGTCCTTTGCGGTCGTGGTG
GCCCTGTCTTGCCTGCTGTCCATCACCATGGAGGTCATTCTTATCATCAAGTACTGGACCGCCCTGTGCG
TGGCGACCATCCTCCTCAGCCTTGGTTTCTACGCCATCATGACTACCACCACCCAGAGCTTCTGGCTCTT
CAGAGTATCCCCCACGACCTTCCCGTTTCTGTATGCCGACCTCAGCGTGATGTCCTCTCCCTCCATCCTG
CTGGTGGTCCTGCTGAGTGTGTCCATAAACACCTTCCCTGTCCTGGCCCTCCGAGTCATCTTCCCAGCCC
TCAAGGAGCTACGTGCCAAGGAGGAGAAGGTGGAGGAGGGCCCCAGCGAGGAGATTTTCACCATGGAGCC
CTTGCCTCATGTACACCGGGAGTCTCGTGCCCGCCGTTCCAGCTATGCTTTCTCCCACCGTGAGGGATAT
GCAAACCTCATCACTCAGGGCACAATTCTGCGGAGGGGACCAGGGGTCAGCAGTGACATAGCATCTGAAT
CCCTAGACCCATCTGATGAAGAGGCAGCTTCGAGCCCAAAAGAGTCACAGTGA

Translation (1300 aa):
MGTGPAQTPRSTRAGPEPSPAPPGPGDTGDSDVTQEGSGPAGIRGGETVIRAGMGDSPGRGAPERRHKAQ
PGRARKYEWRPEGPTSMGSLGQREDLQDEDRNSAFTWKVQANNRAYNGQFKEKVILCWQRKKYKTNVIRT
AKYNFYSFLPLNLYEQFHRVSNLFFLIIIILQSIPDISTLPWFSLSTPMVCLLFIRATRDLVDDMGRHKS
DRAINNRPCQILMGKSFKQKKWQDLCVGDVVCLRKDNIVPADMLLLASTEPSSLCYVETVDIDGETNLKF
RQALMVTHKELATIKKMASFQGTVTCEAPNSRMHHFVGCLEWNDKKYSLDIGNLLLRGCRIRNTDTCYGL
VIYAGFDTKIMKNCGKIHLKRTKLDLLMNKLVVVIFISVVLVCLVLAFGFGFSVKEFKDHHYYLSGVHGS
SVAAESFFVFWSFLILLSVTIPMSMFILSEFIYLGNSVFIDWDVQMYYKPQDVPAKARSTSLNDHLGQVE
YIFSDKTGTLTQNILTFNKCCISGRVYGPDSEATTRPKENPYLWNKFADGKLLFHNAALLHLVRTNGDEA
VREFWRLLAICHTVMVRESPRERPDQLLYQAASPDEGALVTAARNFGYVFLSRTQDTVTIMELGEERVYQ
VLAIMDFNSTRKRMSVLVRKPEGAICLYTKGADTVIFERLHRRGAMEFATEEALAAFAQETLRTLCLAYR
EVAEDIYEDWQQRHQEASLLLQNRAQALQQLLGATAIEDRLQDGVPETIKCLKKSNIKIWVLTGDKQETA
VNIGFACELLSENMLILEEKEISRILETYWENSNNLLTRESLSQVKLALVINGDFLDKLLVSLRKEPRAL
AQNVNMDEAWQELGQSRRDFLYARRLSLLCRRFGLPLAAPPAQDSRARRSSEVLQERAFVDLASKCQAVI
CCRVTPKQKALIVALVKKYHQVVTLAIGDGANDINMIKTADVGVGLAGQEGMQAVQNSDFVLGQFCFLQR
LLLVHGRWSYVRICKFLRYFFYKSMASMMVQVWFACYNGFTGQPLYEGWFLALFNLLYSTLPVLYIGLFE
QDVSAEQSLEKPELYVVGQKDELFNYWVFVQAIAHGVTTSLVNFFMTLWISRDTAGPASFSDHQSFAVVV
ALSCLLSITMEVILIIKYWTALCVATILLSLGFYAIMTTTTQSFWLFRVSPTTFPFLYADLSVMSSPSIL
LVVLLSVSINTFPVLALRVIFPALKELRAKEEKVEEGPSEEIFTMEPLPHVHRESRARRSSYAFSHREGY
ANLITQGTILRRGPGVSSDIASESLDPSDEEAASSPKESQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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