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Report for CCDS45591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45591.1 Public Homo sapiens 17 C17orf107 24 110 108 CCDS HistoryNCBI Gene:100130311Re-query CCDS DB by CCDS ID:45591.1Re-query CCDS DB by GeneID:100130311See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45591.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381365.4 ENSP00000370770.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381365.4Link to Ensembl Protein Viewer:ENSP00000370770.3Re-query CCDS DB by Nucleotide ID:ENST00000381365Re-query CCDS DB by Protein ID:ENSP00000370770
Original member Current member NCBI NM_001145536.2 NP_001139008.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145536.2Link to Protein Sequence:NP_001139008.1Re-query CCDS DB by Nucleotide ID:NM_001145536Re-query CCDS DB by Protein ID:NP_001139008Link to BLAST:NP_001139008.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139008.1 190 Q6ZR85 190 100% 0 0

Chromosomal Locations for CCDS 45591.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4899763 4899828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4899936 4900145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4900237 4900533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGAAGGGGACCCCCAGCTCCCTGGACACCCTGATGTGGATCTACCACTTCCACAGCTCCACCGAGGTGG
CCCTCCAGCCCCCGCTTCTGTCTTCCCTGGAACTCTCCGTGGCCGCAGCCCATGAATATCTGGAGCAGAG
GTTCAGAGAGCTGAAGTCCCTGGAGCCACCCGAACCGAAGATGCAGGGGATGCTGCCTGCCCCGAAGCCC
ACCCTGGGGCTGGTGTTGAGAGAAGCCACAGCCAGCCTCGTGAGCTTCGGCACCACCTTGTTAGAGATCT
CAGCCCTGTGGCTGCAGCAGGAGGCGCGGCGACTAGACGGCAGCGCGGGCCCAGCCCCAGACGGCAGGGA
TCCGGGTGCAGCGCTGAGCCGGGTAGCCCAAGCCGCAGGGCAGGGGGTTCGGCAAGCTGGGGCTGCGGTG
GGCGCCAGCGCCCGGCTCCTAGTCCAGGGAGCATGGCTATGCCTGTGTGGACGGGGTCTGCAGGGGTCTG
CCTCATTCCTGCGACAGTCGCAACAGCAGCTAGGCCTCGGAATCCCCGGAGAACCGGTGAGCTCAGGACA
CGGGGTGAGTTAG

Translation (190 aa):
MKGTPSSLDTLMWIYHFHSSTEVALQPPLLSSLELSVAAAHEYLEQRFRELKSLEPPEPKMQGMLPAPKP
TLGLVLREATASLVSFGTTLLEISALWLQQEARRLDGSAGPAPDGRDPGAALSRVAQAAGQGVRQAGAAV
GASARLLVQGAWLCLCGRGLQGSASFLRQSQQQLGLGIPGEPVSSGHGVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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