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Report for CCDS44919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44919.1 Public Homo sapiens 12 RPL41 24 110 108 CCDS HistoryNCBI Gene:6171Re-query CCDS DB by CCDS ID:44919.1Re-query CCDS DB by GeneID:6171See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44919.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000501597.3 ENSP00000420821.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000501597.3Link to Ensembl Protein Viewer:ENSP00000420821.3Re-query CCDS DB by Nucleotide ID:ENST00000501597Re-query CCDS DB by Protein ID:ENSP00000420821
Original member Current member EBI ENST00000546591.6 ENSP00000449026.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000546591.6Link to Ensembl Protein Viewer:ENSP00000449026.1Re-query CCDS DB by Nucleotide ID:ENST00000546591Re-query CCDS DB by Protein ID:ENSP00000449026
Original member Current member NCBI NM_001035267.2 NP_001030344.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001035267.2Link to Protein Sequence:NP_001030344.1Re-query CCDS DB by Nucleotide ID:NM_001035267Re-query CCDS DB by Protein ID:NP_001030344Link to BLAST:NP_001030344.1
Original member Current member NCBI NM_021104.2 NP_066927.1 Accepted alive Link to Nucleotide Sequence:NM_021104.2Link to Protein Sequence:NP_066927.1Re-query CCDS DB by Nucleotide ID:NM_021104Re-query CCDS DB by Protein ID:NP_066927Link to BLAST:NP_066927.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001030344.1 25 P62945 25 100% 0 0
NP_066927.1 25 P62945 25 100% 0 0

Chromosomal Locations for CCDS 44919.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56116788 56116799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56117189 56117211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56117482 56117524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (78 nt):
ATGAGAGCCAAGTGGAGGAAGAAGCGAATGCGCAGGCTGAAGCGCAAAAGAAGAAAGATGAGGCAGAGGT
CCAAGTAA

Translation (25 aa):
MRAKWRKKRMRRLKRKRRKMRQRSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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